Candidatus Profftia tarda: PROFFT_A_05080
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Entry
PROFFT_A_05080 CDS
T07286
Symbol
pcnB
Name
(GenBank) Poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ptf
Candidatus Profftia tarda
Pathway
ptf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PROFFT_A_05080 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptf03019
]
PROFFT_A_05080 (pcnB)
Enzymes [BR:
ptf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
PROFFT_A_05080 (pcnB)
Messenger RNA biogenesis [BR:
ptf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PROFFT_A_05080 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
CAD6511639
UniProt:
A0A8E4F0F1
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All DBs
Position
1:911515..912777
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AA seq
420 aa
AA seq
DB search
MTMISRNQHNISRQKISENALKVLYRLKKLGYEAYLVGGGVRDLLLGKKPKDFDITTNAT
PEQVRKIFSNCRLVGRRFRLAHVMFGSEIIEVATFRGHHEHGNNEKNISTQTQNGMLLWD
NVYGNIEEDAQRRDFTINSLYYGISDFTVRDYTGGLRDLKEGRICLIGDPETRYREDPVR
MLRAVRFAAKLNMNICLKTAKPIPYLAELLHEIPSSRLFEESLKLLQSGYGFSTYKLLCE
HKLFQLLFPVIARHFTDNGDSPLERIIEQVLQDTDYRLKNGIRVNPAFLFAAMLWYPLVD
LTKIINDKNDLTYYESSALAMHNILDEQCRTLAIPKRITTLVNNIWSLQQWLHQRQGKRA
HKLMEHPKFRAGFDLLVLRAQVENNNDLHNLTKWWDEFQIAKLTRQKEMATKVSDKKATH
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgatatcacgcaatcaacataatatttcgcgccaaaaaattagtgaaaatgcc
ctcaaggttttatatcgcctaaaaaaattaggctacgaagcgtatttagtcggaggaggc
gtgcgcgatttactccttggcaagaaacctaaagattttgatatcactaccaatgcaaca
ccggaacaagtccgtaaaatatttagtaattgccgtctcgttggtcgacgtttccgctta
gcccacgtaatgtttggttcagaaattatagaagttgccacattccgcggtcaccatgaa
catggaaataatgaaaaaaatatttctactcaaacacaaaatggtatgctgctgtgggat
aacgtatatggaaatatagaagaagatgcacaacgtcgcgattttactattaatagttta
tattacggaatttcagactttacagtgcgtgattataccggaggtctgcgtgatctaaaa
gaaggacgaatttgcttgataggagatcccgaaactagataccgggaggatccagtgcgt
atgcttcgtgcagtacgatttgctgccaaactgaatatgaacatttgcctcaaaacagca
aaaccaattccatatttagcagaattgctacatgaaattccatcatctcgactttttgaa
gagtctttaaaactactacaatcaggatatggattttctacctataagctactgtgtgaa
cacaaattattccaactgctgtttccggtaattgctcgtcactttacagataacggagac
agccctctagaacgcattattgagcaggtactacaagataccgattatcgcttaaaaaat
ggtataagagttaatcctgctttcctatttgcggcgatgctatggtaccctctagtagat
cttacaaagataataaatgataaaaacgatttgacatactacgaatcgtctgctcttgca
atgcataatattttagacgagcagtgtcgcacacttgcaattccgaaacgtatcaccact
ttagtgaataatatctggtcactacagcaatggctacatcaacgtcaaggtaagcgtgca
cacaaactgatggaacatcctaagttccgagctggttttgacctgctcgtactaagagct
caagttgaaaataacaatgatttacacaacttaactaagtggtgggatgaatttcagata
gcaaaattaacgcgtcaaaaagaaatggcaaccaaagttagtgataagaaagcaactcat
tag
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