Panthera tigris altaica (Amur tiger): 102948566
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Entry
102948566 CDS
T02988
Symbol
COL18A1
Name
(RefSeq) collagen type XVIII alpha 1 chain
KO
K06823
collagen type XVIII alpha
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102948566 (COL18A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptg04147
]
102948566 (COL18A1)
00535 Proteoglycans [BR:
ptg00535
]
102948566 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
ptg00536
]
102948566 (COL18A1)
Exosome [BR:
ptg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102948566 (COL18A1)
Proteoglycans [BR:
ptg00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
102948566 (COL18A1)
Glycosaminoglycan binding proteins [BR:
ptg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102948566 (COL18A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Collagen_trimer
Endostatin
Motif
Other DBs
NCBI-GeneID:
102948566
NCBI-ProteinID:
XP_015396365
LinkDB
All DBs
Position
Un
AA seq
926 aa
AA seq
DB search
MEFSAPRFRKDATTTLPQTRCGWWENSGDEPRSALHALAVADAERVCTRQHRDRGLPSWP
LTEKLCRPLTQALPLRLRIDRVWFLLGKKAPEKIPVPWGPQGERPEGPPVSKTASSWTSG
RIAELRVRGDPRVSPLHCLEEDDEDSGGVSGDFGSGLEENRELLREQSGLSPKPSLPEAP
PVTSPPLAGGRNVEDSRTEEIEEETTMSSLGGRAGPRSDTVTAWSVRSPGGGPEEGPAGS
AVQSPDAQPVPGPQGPPGPPGPPGKDGAPGKDGEPGDPGEDGKPGDPGPQGFPGTPGDMG
PKGEKGDPGVGPRGPPGPQGPPGPPGPSFRHDRLTFIDMEGSGFGGDLESLRVSVLGMWT
LWWGGGGGGSCYCPHCRRRACVQPSGAWLGEEMRRRIPSGPTLCFSLPQGPPGPPGRDGG
PGKTGQKGSPGEAGAPGPKGSKGDPGPTGAPGETGLAGAPGPAGPPGPPGPPGPPGPGLA
AGFEDMDGSGGPFWSTAHGASGPQGPPGLPGVKGDPGIAVLGGGLTLVSSCVVCRGELGF
NSNVFSLFLLRPVFPPARGQRAVAGVPGPEGPAGPKGDLGSKGQRGPPGPKGEKGEQGPV
FIPLSLASVGHCKEATAGQAGPGPEVRTTSLALVSLLTQLTSCSVLPMQGPPGPPGPPGP
PGPPGTPVYDSNAFMESGRPGPPGLPGYQGPPGPKGDKGEVGPPGPPGQFPLDLLQLEAE
MKGEKGDRGDPGQKGERGEPGGGGFFSSSVPGPPGPPGYPGIPGPKGESIRGHPGPPGPQ
GPPGIGHEGRPGPPGPPGPPGPPGPPSFPGPYRKTISVPGPPGPPGPPGPPGTMGTSSGV
RIWATYQTMLDKVPEVPEGWLIFVAETEELYVRVRNGFRKVLHRPPQDEVLFPSWEALFS
GSEGQLKPGARVFSFDGRDVLQHPAW
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggagttctcagctccacgcttccggaaggatgccaccaccaccctcccgcaaacacgc
tgtggctggtgggagaacagtggggatgagccgcgctcggcccttcacgcgctggctgtg
gccgatgccgagcgggtgtgcaccaggcagcacagagaccgaggactccccagctggccc
cttacggagaagctctgccgacccctgacccaggcccttccattacgtctcaggattgac
cgagtgtggtttctacttgggaaaaaggcgccggagaaaatcccagtgccttggggcccc
cagggggagcgacccgagggccctcccgtctccaagacggcctcgtcctggacctcggga
aggatcgcggagctgagggtgcgcggagacccccgggtgagccccctgcattgtctagag
gaggacgacgaggacagcggtggggtgtctggagacttcgggagcgggctggaggagaac
cgggagcttctcagggagcagtcgggtctgtccccaaagcccagcctccccgaggcgcca
ccggtcacttctccgcccttggctggaggcaggaatgtggaagattccagaactgaagaa
attgaggaagaaaccacgatgtcttcgttgggaggtcgcgccggcccccgctcagacacc
gtcaccgcatggagcgttcggagccctgggggcggcccggaagagggtcccgcaggctct
gcagtacagagccccgatgcacagcctgtacccgggccacagggccccccgggcccccca
gggccaccagggaaggacggtgctcccggaaaggacggtgagccgggcgatcctggtgaa
gacgggaaacctggtgaccctgggccacagggcttccccgggaccccaggagacatgggc
cccaagggcgagaagggggaccctggggtcgggccaagaggacccccaggaccccaaggg
cctccggggccaccaggaccctccttcagacacgacaggctgaccttcattgacatggag
gggtccgggttcggcggtgacctggagagtctccgagtgagtgtcctgggcatgtggacc
ctgtggtgggggggggggggggggggttcctgctactgcccccactgcaggcgcagggca
tgtgtccagcctagtggggcatggctgggagaagagatgagaagaaggattccgtctggc
cccacactctgcttttctctcccccagggaccgccaggtcctccaggaagagacggggga
ccaggaaagactggccagaaaggcagccccggcgaagcgggcgccccgggacctaaggga
agcaagggggaccctggccccactggcgctcctggggagactggcttggcaggagcccca
ggaccagctggaccaccagggccccccgggccccccgggcctccaggaccaggacttgcc
gcggggtttgaggacatggacggctctgggggacccttctggtcaactgctcacggagcc
agcgggccacaggggccaccaggcctgcccggggtcaagggggaccctgggatagctgtg
ctgggcggtgggctgacgctcgtctcctcctgtgtcgtgtgcaggggcgagctgggcttt
aactctaacgtgttttcccttttcctcctccggcctgtgtttccaccggcccgcggacag
agagcggtggcaggcgtgccgggacccgagggaccggccgggccaaagggagatctgggc
tccaaaggccagcggggccccccgggacccaagggcgagaagggcgagcagggcccagtc
ttcatccctctgtccttggcctcagtggggcactgcaaggaggcgaccgcagggcaggcg
gggccgggtcctgaggttcgcacgacctcactggccctggtctcgctcctgacgcagctg
acctcatgttctgtcctccccatgcagggcccacccggacccccggggcctccaggaccc
ccaggccctcccgggactcccgtctatgacagcaacgccttcatggagtctggccgccct
ggacctccaggattgccagggtaccaggggcctcctggaccgaagggtgacaaaggagaa
gtgggcccaccaggaccaccagggcagttcccgctcgacctcctccagctggaggctgaa
atgaagggggagaagggtgatagaggagacccggggcagaagggcgaacggggtgagccc
gggggtggcggattcttcagctccagcgtgcccggcccccccggcccaccaggctaccct
gggattccgggtcccaagggagagagcattcggggccacccaggcccacctggacctcag
gggccccctggcatcggccatgaggggcgtccggggcctcctggcccccctggcccccct
gggcccccagggcccccttccttccccggcccttacaggaagacaatcagtgttcccggc
cccccaggcccacctgggccccctggaccccctggaaccatgggcacctcctcaggggta
aggatctgggccacgtaccagaccatgctggacaaggtgccggaggttccggagggctgg
ctcatctttgtggctgagacagaggagctgtacgtccgggtccggaatgggttccggaag
gtcctgcaccgccctccccaggacgaggtgctgtttcccagctgggaggccttgttctcc
ggctccgagggccagctgaagcccggggcccgcgtcttctctttcgatggcagggacgtc
ctgcagcatcctgcctggtag
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