Panthera tigris altaica (Amur tiger): 102949340
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Entry
102949340 CDS
T02988
Symbol
TNRC6C
Name
(RefSeq) trinucleotide repeat containing 6C
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
ptg
Panthera tigris altaica (Amur tiger)
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptg03019
]
102949340 (TNRC6C)
03036 Chromosome and associated proteins [BR:
ptg03036
]
102949340 (TNRC6C)
Messenger RNA biogenesis [BR:
ptg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102949340 (TNRC6C)
Chromosome and associated proteins [BR:
ptg03036
]
Eukaryotic type
Gene silencing
piRNA pathway
102949340 (TNRC6C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
UBA
RRM_1
RRM_occluded
UBA_NBR1_C
UBA_HYPK
Motif
Other DBs
NCBI-GeneID:
102949340
NCBI-ProteinID:
XP_015397211
LinkDB
All DBs
Position
Un
AA seq
1484 aa
AA seq
DB search
MATGSAQGAFTGHTKKTNGNNGTNGVPVQSPSNQGALGAGGPKGNGNAARVWGVAAGPRA
GAAXXXXXXXGKMDSMIGDGRSQNCWGASNSNAGINLNLNPNANPAAWPVLGHEGTVATG
NPSSICSPVSAIGQNAGNQNGNPPGTLGAWGSLLPPESTEPQTSASQNVSFSVQPQNLNT
DGPNNTNPMNSSPNPVNAMQTNGLPNWGMAVGMGAIIPPHLQGLPGANGSSVSQVGGSGG
GGGGRVGGTSSGVGHIHSGAWGHPTRSASNGVNGEWGKPPNQHSNGDGNGKGSTGWDGPS
VSGPNPAVQPGSEHVNSWAKAASSGTTASEGSSDSSGSHHEGGSGREGAEGRRRDKGILD
QGHIQLPRNDLDPRVLSNTGWGQTPVKQNTAWEFEESPRSERKNDNGTEAWGCAAPQPSH
SGAKSDGSIVSSTNTSAVSGWVSSPPAAAPASTGWGDGSNKAPNGPGVWGDSISSTAVNN
AAAAVAKSGHAWGGTGNREDQSPTWGEPQKPKSQTWGDGQKSNPAWSAGGGDWADSSSVL
GHLGDGKKDGSGWDADGNRSGSGWNDATRSGTSGWGNGTSAKVNPGTNWGESLRPGPQQN
WAGKPQDSNVGSWPSGKSSRRSVSLGRVRGEVPVCGVRPDARERSRGQSKSVGAVRAVFG
RLTETDRNRPKERSSRNDFELETTFSTSSLFHFYHMNNLVLSRAVPFAVSSGWGEMPNVH
SKAESSWGEPSSPSALVDNGTAAWGKPPSSGSGGGDQPAEPPVTFGRAGAPTAAPALCKP
ASKSMQEGWGSGGDDTNLGASQWEDEEGGMWNSAASQESASSCASWGNAPKKGLPKGMKT
SGKQDEAWIMNRLIKQLTDMGFPREPAEEALRSNNMNLDQAMSALLEKKVDVDRRGLGVT
DYNGGVTKALGCRPPVSKDSSGDRPTFLDKDGGLVEEPTTSPFLPSPSLKLPLSNSALPN
QALGGIASGLGMQNLNSSRQIPSGNLGVFGSSGAAKARTMQVQAQLLQFAAKNIGLNPAL
LTSPINPQHMTMLNQLYQLQLAYQRLQIQQQMLQAQRSVSGPVRQQEQQQPPSSTLTAGH
ILTAFLFLAGLNPNMNVSSMDMTGGLSVKDPSQSQSRLPQWTHPNPMDNLPGAAPPLDQN
PSKHGAIPGGLSIGPPAKSSIDDSYGRYDLIQNSESPASPPVAVPHSWSRAKSDSDKIAN
GSSINWPPEFHPGVPWKGLQNIDPENDPDVTPGSVPTGPTINTTIQDVNRYLLKSGGKLS
DIKSTWSSGPASHTQASLSHELWKVPRNTTAPTRPPPGLTNPKPSSTWGASPLGWTSSYS
SGSAWSTDTSGRTSSWLVLRNLTPQIDGSTLRTLCLQHGPLVTFHLNLTQGNAVVRYSSK
EEAAKAQKSLHMCVLGNTTILAEFAGEEEVNRFLAQGQAVPSTSGWQSGTGAGQARLVRP
EAPARMVESLRRSQGPRPPGPRDPVWASEIFGQKRVMEEVFCVS
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atggctacggggagtgcccagggcgccttcaccggacacaccaagaagacgaacggcaat
aatggcaccaacggggtgcccgtccagagcccttctaaccagggtgccctgggagcaggg
ggccccaaggggaacgggaacgcggcccgagtgtggggcgtagccgcggggccccgggcg
ggcgcagccntnnnnnnnnnnnnnnnnnntgggaaaatggacagcatgatcggagacggg
agaagccagaattgctggggtgcttccaactccaatgccggcattaatctcaacctgaac
cctaatgccaacccggccgcctggcccgtactcggacacgaaggaactgtggcgacaggc
aacccttccagtatttgcagtccggtcagtgccataggtcaaaacgcgggcaaccagaac
gggaacccgccgggcactttaggtgcttggggaagcctgctgccgccggagagcacagaa
ccacagacgtccgcttctcagaatgtgtctttcagcgtacaacctcagaaccttaacact
gatggaccaaataacactaaccccatgaactcttcgccaaaccctgtcaatgcaatgcag
acgaacggactgccaaactggggcatggccgtcggcatgggggccatcatcccaccccac
ctgcaaggccttcctggtgctaacggatcctcggtgtctcaagtcggagggagcggcggc
ggggggggggggcgggtgggcggcaccagcagcggcgtcggtcacatccattcgggggct
tggggccaccccacccgaagcgcctctaacggtgtgaatggggagtgggggaagccccca
aaccagcattccaacggtgacggcaacgggaaaggatcgacagggtgggacggtccgagc
gtcagcggcccgaatcctgccgtgcagcccggcagcgagcacgtgaactcttgggccaaa
gccgcgtcttctggaaccacggcaagcgaaggaagtagcgacagttccggcagtcaccac
gaagggggctccgggagggaaggagcagaaggccggaggcgagataaagggatcctagac
caagggcatatccagttgccaaggaacgatctggacccgagagtcctgtctaatactggt
tggggacagactcccgtaaagcaaaacactgcctgggaatttgaagagtcccctaggtcc
gagaggaaaaatgacaacgggacagaggcctggggctgtgcggctcctcagccttcacac
tcaggggcgaagagtgatgggtccatcgtgagcagtacaaatacctctgcagtatccggg
tgggtcagctcaccgcctgctgctgcgccggcgagcacagggtggggggacggcagcaac
aaagcgccaaatggcccgggggtctggggggactcgataagctctactgctgttaataat
gctgctgctgctgtcgccaagagcggccacgcttggggtgggaccggaaaccgggaggac
cagtcgcccacctggggggagccccagaagcccaaatctcaaacctggggagacggacaa
aagtccaatccggcctggagcgctggagggggagactgggcggactcgtcttccgtcctc
ggacacttgggggacgggaaaaaagatggctctggatgggatgccgacggtaatcggtca
gggtctggttggaacgacgctaccaggtctgggaccagtggctggggtaatggcacaagc
gcaaaggtgaatccagggacaaactggggagagtctttaagacctggcccccaacagaac
tgggcgggcaaaccccaggacagcaatgtgggcagctggccttctggaaaaagctcccgc
cgcagcgtgtccctgggccgcgtgcgcggcgaggtcccggtgtgcggtgtcaggcctgac
gcgcgtgagcgatcgcggggccagagcaagagcgtgggggcggtgcgggctgtgtttggc
cgcctgacggagacggacagaaaccgtcctaaagaaagatcatctcgaaatgattttgaa
cttgaaactaccttttctacttcttctctgtttcacttttatcacatgaataatctcgtt
ctctctcgggcggtgccctttgcagtctcatcgggctggggagagatgcctaacgtccat
tcgaaggctgagagctcttggggagagccgtcctccccctctgccctggttgacaacggc
accgcagcgtggggcaagccgcccagcagtggcagcggagggggggaccagcccgcggag
ccgcccgtgaccttcgggagagccggcgcccccactgccgccccggccctgtgcaaacca
gcttcgaaatctatgcaagaaggctggggcagtggtggggacgacacgaacctcggtgcc
agtcagtgggaagacgaagaagggggcatgtggaacagtgctgcttcccaagaaagcgcg
tcctcctgcgcctcctgggggaacgcccccaaaaaaggactcccaaagggcatgaaaacg
tctggcaagcaggacgaggcctggatcatgaaccggctgatcaaacaactcacggacatg
ggcttcccgagagaaccagctgaagaggccttgaggagcaacaatatgaatcttgaccag
gccatgagcgccctgctggaaaagaaggtggacgtggacaggcgtggactgggagtgacc
gactacaatggaggggtcaccaaagcccttggctgccgcccaccagtctccaaagactct
tccggggaccgccccacctttcttgacaaggacggcggcctggtggaagagcccacgact
tcaccatttttgccttcaccaagcctgaagctccccctttcaaacagtgcactccctaat
caggccctgggtgggattgcctcagggctgggcatgcaaaacttgaattcttccagacag
atcccgagtggcaatctgggtgtgttcggcagcagcggagcagcaaaagccaggaccatg
caagttcaagcacagcttttgcagtttgcagcaaaaaacattggtctcaaccctgcacta
ttgacctcgccgatcaatcctcagcatatgacgatgttgaaccagctctatcagctgcag
ctggcataccaacgtttacaaatccagcagcagatgctacaggctcagcgcagcgtttcc
ggacccgtgagacaacaggaacagcaacagccgccgtcctccaccctgaccgcagggcac
atcctaacagcgtttttatttttagctggactgaacccaaacatgaatgtcagcagcatg
gacatgactggcggtttgtcagtgaaggacccgtctcagtcccagtcccgcctccctcag
tggacacaccccaacccgatggacaacctgcccggtgctgctcctcccctcgaccagaac
cccagcaagcatggtgctatccccggaggcctgagcatcgggcctccggctaagtcctcc
attgacgactcctatggccggtacgatttaatccagaacagtgagtcaccagccagtcct
ccggtagctgttccccatagctggtcacgtgccaaatctgacagtgataagatcgcgaat
ggctccagcatcaactggcccccagaattccatcctggagtcccgtggaaaggacttcag
aacatagaccctgagaacgaccccgacgtcactcctggaagtgtccccaccgggcccacc
atcaataccaccatacaggacgtcaaccgctacctcctcaagagtggaggtaaactgtca
gacattaaatcgacgtggtcctctggccctgcctcccacacgcaagcctctctgtctcac
gaactgtggaaggtgcccagaaacactactgcacccacgaggccgcctccagggttaacc
aatcccaagccttcctccacctggggagccagccccctcggctggaccagctcttactcc
tcgggttccgcgtggagcaccgacacctcaggaaggacaagcagctggctcgttctccgc
aacctcacgccccagatcgacggctctaccctacggacgctgtgtttgcagcacgggcct
ctcgtcacattccacctgaacctgacccaaggcaacgccgtggtccgctacagctccaag
gaggaagccgccaaggcccagaagtccctgcacatgtgtgttctgggaaacaccaccatc
ctggccgagtttgctggcgaagaagaggtaaatcgtttcctggcccaaggccaggcggtg
ccgtccacctccggctggcagtcgggcaccggggccggccaggcgcggctggttcgccct
gaagccccagcacggatggtcgagagcctgagacgcagccagggcccgcggccccccggc
ccccgtgacccggtttgggcgtcagaaatatttggacagaagcgcgtgatggaggaggtc
ttctgtgtttcctag
DBGET
integrated database retrieval system
