Panthera tigris altaica (Amur tiger): 102949405
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Entry
102949405 CDS
T02988
Symbol
COL6A3
Name
(RefSeq) collagen type VI alpha 3 chain
KO
K06238
collagen type VI alpha
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg04151
PI3K-Akt signaling pathway
ptg04510
Focal adhesion
ptg04512
ECM-receptor interaction
ptg04518
Integrin signaling
ptg04820
Cytoskeleton in muscle cells
ptg04974
Protein digestion and absorption
ptg05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102949405 (COL6A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102949405 (COL6A3)
04518 Integrin signaling
102949405 (COL6A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102949405 (COL6A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102949405 (COL6A3)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102949405 (COL6A3)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
102949405 (COL6A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptg04147
]
102949405 (COL6A3)
00536 Glycosaminoglycan binding proteins [BR:
ptg00536
]
102949405 (COL6A3)
Exosome [BR:
ptg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102949405 (COL6A3)
Glycosaminoglycan binding proteins [BR:
ptg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102949405 (COL6A3)
Hyaluronan
Extracellular matrix or blood plasma proteins
102949405 (COL6A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
Kunitz_BPTI
fn3
FluMu_N
Motif
Other DBs
NCBI-GeneID:
102949405
NCBI-ProteinID:
XP_007083089
LinkDB
All DBs
Position
Un
AA seq
3088 aa
AA seq
DB search
MRKHRHLPLVATFCLFLSGFSLTRAQQQQADVKNGAAADIIFLVDSSWSIGKEHFQLVRE
FLYDVIKSLAVGENDFHFALVQFNGNPHTEFLLNTYRTNQEVLSHISNMSYIGGSNQTGK
GLEYVMQNHLTEAAGSRASDGVPQVIVVLTSGHSDDGLALPSAELKSADVNVFAIGVEDS
DEGALREIASEPLNMHVFNLENFTSLHDIVGSLVSCVQSSVAPEGAGGTETLKDITAQDS
ADIIFLIDGSNNTGSVHFAVIRDFLVNLLERLSVGTQQIRVGVVQYSDEPRTMFSLDTYS
TKVQVLDAVKALAFTGGELANIGLALDFVVENHFTQAGGSRVEEGVPQVLVLISAGPSSD
EIRDGVIALKQASVFSFGLGTQAASRAELQHIATSDNLVFTVPEFRSFGDLQEQLLLYIV
GVAQRRIVLQPPTIVTEVIEVNKRDIVFLVDGSSALGLANFNAIRDFIAKVIQRLEIGQD
LIQVAVAQYADTVRPEFYFNSYPSKREVIAAVRRMKPMEGSALYTGSALDFVRNNLFTSS
AGYRAAEGVPKLLVLVTGGKSLDEISQPAQELKRSSIMSFAIGNKVADQAELEEIAFDSS
LVFIPAEFRAAPLQGVLPGLLAPLRTLTGTTEVHVNKRDIIFLLDGSFNVGKTDFPYVRD
FVMNVVNSLDVGSDNIRVGLVQFSDTPVTEFSLNTYQTKSDLLAHLRQLQPKGGSGLNTG
AALSYVHANHFTEAGGSRIREHVPQLLLLVTAGQSEDSYGQAANALARAGILTFCVGASQ
ANKAELEQIAFNPSLVYLMDDFSSLPALPQQLIQPLTTYVSGGVEEVPFAQPESKRDILF
LFDGSANLVGQFPAVRDFLYKVIDELDVKPDGTRVAVAQYSDDVRVESRFDEHQNKPEIL
NLVKRMKIKTGKALNLGYALEYAQRYIFVKSAGSRIEDGVVQFLVLLVAGRSSDRLDTPA
LNLKQSQVVTFILQAKNADPAELELMVPSPVFILAAESLPKIGDLQPQIVNLLKSVQDGA
PTPVSGEKDVVFLIDGSEGVRSGFPLLKEFVQRVVETLDVGPDRVRVAVIQYSDRTRPEF
YLNSYMDQQSVVSAVRKLALLGGPAPNTGAALDFVLRNILISSAGSRIAEGVPQLLIVLT
ADRSGDDVRGPSVVLKRGGAVPIGIGIGNADITEMQTISFIPDFAVAIPTFRQLGTVQQV
ISDRVIQLSREELSRLQPVLLPPTSPGVGNKKDVVFLIDGSQNAGPEFQYIRTLIERLVD
YLDVGFDTTRVAVIQFSEDPRVEFLLNAHSSKDEVQNAVRRLRPKGGRQINIGGALEYVS
RNIFKRPLGSRIEEGVPQFLVLISSGKSDDEVDDSAAELKQFGVAPFAVARNADQEQLVK
ISLSPEYVFSVSTFRELPSLEQKLLTPITTLTSEQIQRILASTRYPSPDVESDAADIVFL
IDSSDNVRPDGIAHIRDFVSRIVRRLNIGPNKVRIGVVQFSNEVFPEFYLKTHRSQAPVL
DAIRRLRFKGGSPLNTGKALEFVARNLFVKSAGSRIEDGVPQHLVLFLGGKSQDDITRFS
QVISSSGIVSLGVGDRNVDRTELQTITNDPRLVFTVREFRDLPNIEDRIMNSFGPSGITP
APPGVDIPSPSRPEKKKADVVFLLDGSINFRRDSFQEVLRFVSEIVDTLYEGGDSIQVGL
VQYNSDPTDEFFLRDFTTKQQIIDAINKVVYKGGRHANTKVGLQHLRLNHFVPEAGSRLD
QRVPQIAFVITGGKSVEDAQEASLALTQRGVKVFAVGVKNIDSEEIGKIASNSATAFRVG
NVQELSELSEQVLETLHDAMHETLCPGVTDVSKVCNLDVILGFDGSRDQNVFVTQKGLES
KVDTILNRISQMQRISCTGGQMPTVRVSVVANTPSGPVEAFDFAEYQPELFEKFQNMRSQ
HPYVLTADTLKVYQNKFRQSSADNVKVVIHFTDGVDGDLADLQRASEDLRQEGVQALILV
GLERVANLEQLIQLEFGRGFMYNRPLRLNLLDLDYELAEQLDNIAEKACCGVPCKCSGQR
GDRGPIGSIGPKGIPGEDGYRGYPGDEGGPGERGPPGVNGTQGFQGCPGQRGIKGSRGFP
GEKGELGEIGLDGLNGEDGDKGLPGSPGEKGSPGRRGDKGPKGDKGERGDVGIRGDPGDS
GRDSQQRGPKGETGDIGPMGLPGRDGVSGRPGETGKDGGFGRRGPAGAKGNKGGPGQPGS
VGEQGTRGGQGPPGPTGPPGLIGEQGISGPRGSGGTAGAPGERGRVGPLGRKGEPGEPGP
KGGVGSRGPRGETGDDGRDGVGGEGRKGRKGERGFPGYPGPKGAPGEPGTDGGPGPKGIR
GRRGNSGPPGAIGQKGDPGYPGPSGPKGNRGDSMDQCALVQSIKDKCPCCYGPLECPVFP
TELAFALDTSEGVTQDTFSRMRDVLLRIVGDLTIAESNCPRGARVAVVTYNNEVTTEIRF
ADSKKKSVLLDKIKNLQVALTSKQQSLETAMSFVARNTFKRVRNGFLMRKVAVFFSNKPT
RASPQLREAVLKLSDAGITPLFLTSQEDRQLISALQINNTAVGHALVLPPRRDLTDFLKT
VLTCHVCLDICNIDPSCGFGSWRPSFRDRRAAGSDVDIDMAFILDSSEATSLFQFNEMRK
YIGYLVRQLDLSPDPKAAQHFARVAVVQHAPYESAGNASVPPVKVEFSLTDYGSKEKLVD
FLSSRMTQLQGTRDLGRAIQYTIENVFESAPNPRDMKVVVLMLTGEVDKQQLEEAQGVIL
QAKCKGYFFVILGIGRKVNVKELYNFASEPSDVFFKLLDKSTELNEEPLMRFGRLLPSFV
SSENAFYLSPDIRKQCDWFQGDQLTKNPVKFGHKQLPAAAKPAAVRPPAAAKPAAAKPEA
AKPQATKLATSKTDAAKPVVKAFREVQVSDVTENSARIHWERPEPPSPYFYDLTVTSAHD
QSLVLRQNLSVTERAIGGLLAGHTYHVVVLCYLKSQVRAAYQGSFTTKKAQPPSPPQARS
ASSSTINLMVSTEPLAGGEADICKLPKEEGTCRKFILKWYYDADTKSCARFWYGGCGGNE
NRFNSQKECEKVCAPALVNPGVMAAMGT
NT seq
9267 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaacatcgacatttgcccttggtggccaccttttgcctctttctctcaggcttt
tctcttacccgtgcccaacagcagcaagcagatgtcaaaaatggtgccgctgccgatata
atatttctagtggattcctcttggagcattggaaaggaacatttccaacttgttcgagag
tttctgtatgatgttataaaatctttagctgtgggagaaaatgatttccattttgctctg
gtccagttcaacggcaacccacataccgagttcctgttaaatacgtaccgtactaatcaa
gaagtcctctcccacatttccaacatgtcttatattgggggaagcaatcagactggaaaa
ggattagaatacgtaatgcagaatcacctcactgaggctgctggaagccgggccagtgac
ggagtccctcaggttattgtagtgttgaccagtggacactcggacgacggccttgctctg
ccttcagcggaacttaagtctgctgatgttaacgtgtttgcaattggagttgaggattca
gatgaaggagcgttaagagaaatagcgagcgaaccgctcaatatgcatgtgttcaaccta
gagaattttacctcacttcacgacatagtaggaagcttagtgtcctgtgtgcagtcatcc
gtggctccagaaggggctggaggcacagagacccttaaagacatcacagcacaagactct
gctgacattattttccttattgatggatcaaacaacaccggaagtgtccattttgcagtc
attcgcgacttccttgtaaatctccttgagagactctcggttggaactcagcagatccga
gtgggggtggtccagtatagcgatgagcccagaaccatgttctccttggacacctactcc
accaaggtgcaggttctggatgcagtgaaagcccttgcgttcactggtggggagctggcc
aatatcggcctggccctggatttcgtggtggagaaccacttcacccaggcagggggcagc
cgagtggaggaaggggttccccaggtgctggtcctcataagcgccgggccttctagtgac
gagatccgcgacggggtcatagcactgaaacaggctagcgtgttctcgtttggcctcgga
acccaggccgcctccagggcagagcttcagcacatagctaccagtgacaacttggtgttt
actgtcccggaattccgtagctttggggacctccaggagcaattactgctgtacattgtt
ggcgtggcccaaaggcgcattgtcttacaaccgccaaccattgtcacagaagtcattgaa
gtcaacaagagagacatagttttcctggtggatggctcatccgcactgggactggccaac
ttcaatgcaatccgagacttcattgccaaagtcatccagaggctggaaatcggacaggat
cttatccaagtggcagtggctcagtacgcagacactgtgaggccagagttttatttcaat
agctaccccagtaaaagggaagtcattgccgccgtgcggagaatgaagcccatggaaggc
tcggccctgtacacgggctctgctctggactttgttcggaataacctgttcactagctcg
gctggctaccgggccgccgagggggtcccaaagcttctggtgctggttacaggcggtaag
tccctagatgaaatcagccagcctgcccaggagctgaagagaagcagcatcatgtccttt
gccattgggaacaaggttgccgaccaggctgagctggaagagattgctttcgattcctcc
ctggtgttcatccccgccgagttccgagccgcccctttgcaaggcgtgttgcccggctta
ctggcgcctctcaggaccctcaccggaaccactgaagttcacgtaaacaaaagggatatc
atctttcttttggatggatcgttcaacgttggcaagaccgatttcccttatgtgcgggac
tttgtaatgaacgtagttaacagccttgatgtcggcagcgacaatatccgtgtcggttta
gtgcaatttagcgacacgccagtaacagagttctccctaaacacataccagacaaagtca
gatttgcttgctcatctgaggcagctgcagcccaagggggggtcgggcctgaacaccggc
gcggccctgagctatgtccatgccaaccacttcaccgaagctggcggcagcaggatccgc
gaacacgtgccacagctcttgctcctggtcacagccgggcagtccgaggactcctatggg
caagctgccaacgccctagcgcgcgcaggcatcctgaccttttgtgtgggagctagccag
gcgaataaggcagagcttgagcagatcgcttttaacccgagcctggtgtatctcatggac
gatttcagctccctgccagccttgcctcagcaactgattcagcccctaaccacatatgtt
agtggaggtgtggaggaagttccattcgcccagccagaaagcaagcgagacattctgttc
ctctttgacggctcagccaatctcgtgggccagttccctgctgtccgcgactttctctac
aaggttatcgacgagcttgacgtgaagcctgatgggacccgggttgcggtggctcagtac
agcgatgatgtcagggtggagtcccgttttgatgagcaccagaacaagcccgagatcctg
aatctcgtgaagagaatgaagatcaagacgggcaaagccctcaacctgggctacgcgctg
gagtacgcacagagatacatttttgtgaagtccgccggaagccggatcgaggacggagtg
gttcagttcctggtgctgctagttgcaggaaggtcctcggatcgtttggacacaccggca
ctcaacctgaagcagagccaggtggtgaccttcatactgcaggccaagaacgcagatccc
gccgagctggagctgatggtgccgtcccccgtcttcatcctggccgcggagtcactcccc
aagatcggagaccttcaaccacagatcgtcaatctcttaaaatccgtgcaggatggggcg
ccgacgccagtttcaggtgaaaaggatgtggtgtttctgatagatggctctgagggtgtc
aggagcggcttccctctgttgaaagagtttgtccagagagtggtggagaccctggatgtg
ggcccagaccgggttcgtgtggccgtgatacagtacagcgaccggaccagacctgagttc
tacctgaattcatacatggaccagcagagtgtggtcagtgccgtacgcaagctggccctc
ctgggaggcccggcccccaacaccggggccgccctggactttgtcctgaggaatatcctg
atcagctcggccggaagcaggatagcagaaggtgtcccccagctcctgatcgtcctcacg
gctgacaggtctggggatgacgtgaggggcccctccgtggtcctgaagaggggaggggca
gtgcccatcggcattggcatcgggaacgccgacatcacagagatgcagaccatctccttt
atccccgactttgccgtggccattcccaccttccggcagctagggaccgtccagcaggtg
atctccgacagagtgattcagctcagccgggaagagctgagcaggctgcagccagttttg
ctccccccaacgagcccaggtgttggaaataagaaggatgtggtctttctcatcgatggg
tcccaaaatgctggccctgaattccagtacatccgcaccctcatcgagaggctggtcgac
tacctggacgtgggcttcgacacgactcgggtggcagtcatccagttcagcgaggacccc
agagtggaatttctgctgaatgcccattccagtaaggatgaggtacagaatgcagtgagg
cggctgaggcccaaaggcgggaggcagatcaacattgggggtgccctggagtacgtgtca
aggaatatcttcaagaggccactgggaagccggattgaagagggtgtccctcagttcctg
gtcctcatttcttctgggaagtctgatgacgaggtagacgattccgcggcagagctcaag
cagtttggtgtggcgccatttgcggtcgcaaggaatgcagaccaggaacagttggttaag
atctccctgagccccgagtatgtgttctcggtgagcaccttccgggagctgccaagcctg
gagcagaaactgctgacccccatcacaaccctaacctcagagcagatacagcggatccta
gccagcactcgctatccttctccagatgttgagagtgatgctgcagacattgtcttccta
attgatagctctgacaacgtcaggccagatggcatcgcgcatattcgggactttgttagc
agaattgttcgcagactcaacattggccccaacaaagtgaggatcggggttgtacagttc
agcaatgaggtcttcccagaattctacctgaagacccacagatcccaggcccctgtgctt
gacgcaatacgtcgcctgaggttcaaaggggggtccccgctgaataccggcaaagctctg
gaatttgtggcaagaaatctctttgtcaagtctgctgggagccggatagaagatggcgta
ccccaacacctggttctgtttctgggtggaaaatcccaggatgatattaccaggttttca
caggtgattagctcctcagggattgtgagtttaggggtaggagaccgaaatgttgacaga
acagagctgcagaccatcaccaatgaccccagactggtcttcacggtgcgagaattcaga
gacctccccaacatagaagacagaatcatgaactcttttggaccttccgggatcacacct
gcacctccaggagtggacataccgtctccctcacggccagagaaaaagaaagcagacgtt
gtgttcctgttggacggctccatcaatttcaggagggacagtttccaggaagtgctccgt
ttcgtgtctgaaattgtggacacgctgtatgaggggggcgactccatccaagtggggctg
gtccagtacaactccgaccccaccgatgagttcttcctgagggactttaccaccaagcag
cagattatcgacgctatcaacaaagtggtctacaaaggggggagacacgcaaacaccaag
gtgggcctccagcacctgcggctgaatcatttcgtgccggaggcgggcagccgcctggat
cagagggtccctcagatagcatttgtgatcacgggcgggaagtcggtggaggatgcccag
gaagccagcctggctctcacccagagaggtgtcaaagtgtttgccgtgggcgtgaagaac
atcgactcagaggagattgggaagatcgcgtccaacagcgccacggcgttccgtgtgggg
aacgtccaggagctgtctgagctgagcgagcaagttttggaaactctgcacgatgcgatg
catgaaaccttatgtccgggcgtgaccgatgtttccaaagtctgtaatctggatgtgatt
ctggggtttgatgggtcaagagatcagaacgtatttgtgacccagaagggccttgagtcc
aaggtggacaccatcttgaatagaatcagccagatgcaaagaatcagctgcaccggcggc
cagatgcccactgtgcgcgtgtcggtggtggccaacacgccctcgggccccgtggaggcc
tttgactttgccgagtaccagccggagctgtttgagaagttccagaacatgcgcagccag
cacccctacgtcctcactgcggacacgctgaaggtctatcagaacaagttcagacagtcc
tcagcagacaacgtaaaggtggtcattcattttactgatggggtggacggagatctggct
gatttacaaagggcgtctgaggatctccgacaagaaggcgtccaagctctgatcctggtg
ggccttgaacgtgtagccaacttggagcagctgatacagttggagttcgggcgaggtttc
atgtacaacaggcccctgaggcttaacctgctggacctcgattatgaactggcagagcag
ctcgacaacattgctgagaaagcttgctgtggggttccctgcaaatgctccgggcaaagg
ggagaccgcgggcccattggcagcatcgggccaaagggtattcccggggaagatggctac
cgaggttatcctggtgacgagggcggacccggtgaacggggtcctcccggcgtgaacggc
actcaaggtttccagggctgccccgggcagagaggaataaagggctctcgcggattccca
ggagagaagggtgaattaggagaaatcggactggatggtctcaatggcgaagatggggac
aaaggattgcccggttctcctggagagaaagggagtcccggcagaaggggtgacaaagga
cccaaaggggacaaaggggagaggggagacgttggaattcgaggtgacccgggtgactca
ggacgggacagtcagcagagagggcccaaaggagaaaccggagacatcggccccatgggt
ctccctgggagagacggggtatctggaaggcctggagaaaccgggaaggacggcggcttt
ggccgaaggggaccagcgggagctaagggcaacaagggcggcccgggccagccgggctcc
gtgggagagcagggcacccgaggtggacagggtccacctggtcccacgggtcccccaggc
ctgatcggtgaacaaggcatttctgggcctcggggaagcggagggactgcgggtgctcct
ggagaacgtggcagagtcggtcccctgggaagaaagggcgagcctggagagccgggacca
aagggaggagtcgggagccggggcccccgaggggagacgggcgatgatggcagagatggg
gttggcggtgaaggacgcaaaggcagaaaaggagaaagaggattccctgggtaccctggt
ccaaagggtgcccctggcgagcccgggacggatggaggaccaggacccaaaggcatcagg
ggccgaaggggaaattcaggacctccaggggcaattgggcagaagggggaccctggctac
ccaggaccatctggtcccaagggcaacagaggtgactccatggatcaatgtgcccttgtc
caaagcatcaaagataaatgtccttgctgctatgggcccctggaatgccccgtcttcccg
acggaactggcctttgccttagacacctcggagggggtgacccaagacacgtttagccgg
atgagggatgtgctcctgaggatcgtgggcgacctgaccattgctgagagcaactgccct
cggggggcacgcgtggccgtggtcacctacaacaacgaggtgaccacggagatccggttt
gccgactccaagaagaagtcggtcctcttggacaagatcaagaaccttcaggtggctctg
acgtccaagcaacagagtctggaaacggccatgtccttcgtggccagaaacacgtttaag
cgtgtgaggaatggattcctgatgaggaaagtggctgttttcttcagcaataagcccacg
agggcgtccccacagctcagggaggctgtgctaaagctttcggatgcggggatcaccccc
ttgttcctcacgagccaggaggaccggcagcttatcagcgcgttgcagatcaataacacc
gcagtgggacacgcgctcgtcctgccccctaggagagacctcaccgacttcttgaagacc
gtcctgacatgtcacgtttgcctggacatctgcaacattgacccgtcctgtggctttggc
agctggaggccttccttccgggacaggagagcggcgggcagcgacgtggacatcgacatg
gctttcatcttagatagctccgaggccaccagcctgttccagttcaatgagatgaggaag
tacatagggtacctggtcagacagctggacctgagcccagaccccaaggccgcccagcac
tttgccagggtggcggttgtgcagcacgcgccctatgagtccgcagggaacgccagcgtg
ccccccgtgaaggtggagttctccctgacggactacggctccaaggagaagctggtggac
tttctcagcagcagaatgacacagctgcagggcaccagggacttgggccgcgccatccag
tacaccatagagaacgtcttcgaaagcgcacccaacccacgggacatgaaagtcgtggtt
ctgatgctgacgggagaggtcgacaagcagcagctggaagaggcccagggggtcatcttg
caggccaagtgcaagggctacttcttcgtgattctgggcatcggcaggaaggtgaacgtc
aaggagctgtacaacttcgccagtgagccaagcgacgtcttcttcaaactgttggataag
tcgaccgagctcaacgaggagccgctgatgcgctttgggaggttgttgccgtccttcgtc
agcagtgaaaatgctttttacttgtccccagatatcaggaaacagtgcgattggttccaa
ggggaccaactgacaaagaatcctgtgaagtttggtcacaaacagttgccagcggccgcg
aagccagcagctgtgagaccccctgccgcagccaaaccagcggccgccaagcccgaggcc
gccaagccccaggccaccaaactggccaccagcaagacagacgctgctaagcccgtggtt
aaggcgttccgggaggtccaggtgtcggacgtcacagagaacagcgccagaatccactgg
gagaggcccgagccccccagtccttacttttatgacctcactgtcacctcggcccacgat
cagtccctggtgctgaggcagaacctgtcggtcacggagcgtgccatcgggggcctgctc
gctgggcacacgtaccacgtggtggtgctttgctacttgaagtctcaggtcagagccgcc
taccaaggaagtttcactacaaagaaagctcagcctccgtctccaccacaagcaaggtca
gcttctagttcaaccatcaatctgatggtgagcacagagccattggctggtggtgaagca
gatatatgtaagctacccaaagaagaagggacttgcaggaaattcatactaaaatggtac
tacgacgcggacaccaaaagctgtgcgagattctggtacggaggttgcggtggcaacgag
aacagatttaattcacagaaagaatgtgaaaaggtttgcgctcccgcgctcgtcaacccc
ggagtcatggctgccatggggacctaa
DBGET
integrated database retrieval system
