Panthera tigris altaica (Amur tiger): 102949607
Help
Entry
102949607 CDS
T02988
Symbol
AFDN, MLLT4
Name
(RefSeq) afadin, adherens junction formation factor
KO
K05702
afadin
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg04014
Ras signaling pathway
ptg04015
Rap1 signaling pathway
ptg04024
cAMP signaling pathway
ptg04520
Adherens junction
ptg04530
Tight junction
ptg04670
Leukocyte transendothelial migration
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
102949607 (AFDN)
04015 Rap1 signaling pathway
102949607 (AFDN)
04024 cAMP signaling pathway
102949607 (AFDN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
102949607 (AFDN)
04530 Tight junction
102949607 (AFDN)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
102949607 (AFDN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
PDZ_2
ASPP1-2_RA
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
102949607
NCBI-ProteinID:
XP_015395163
LinkDB
All DBs
Position
Un
AA seq
1715 aa
AA seq
DB search
MALLQPKDLEFHGVMRFYFQDKAAGNFATKCIRVSSTATTQDVIETLAEKFRPDMRMLSS
PKYSLYEVHVSGEERRLDIDEKPLVVQLNWNKDDREGRFVLKNENDALPPKKAQSNGPEK
QEKEGVIQNFKRTLSKKEKKEKKKREKEAVRQASEKDDRPFQGDDLLRREGPGCPQSRWA
PGTSACRPWPAAERAGEQTSFTRTISNPEVVMKRRRQQKLERRMQEFRSSDGRPDSGGTL
RIYADSLKPNIPYKTILLSTTDPADFAVAEALEKYGLEKENPKDYCIARVMLPPGAQHSD
ENGAKETILDDDECPLQIFREWPTDRGVLVFQLKRRPPDYVPKKTKKNVDGKLVKGKXXX
XXXXXXXXAEGSGYGSALPPEKLPYLVELSPDGSDSRDKPKLYRLQLSVTEVGTEKFEEN
SIQLFGSGIQPHHCDLTNMDGVVTVTPRSMDAETYVEGQRISETTMLQSGMKVQFGASHV
FKFVDPSQDHAVAKRPVDGGLTAKGPRQKPGIVQETTFDLGGDVHSGAALPASKSATRLD
SDRENRSDVKRRPLSFFRTQDALGPELILPASIEFRESSEDSFLSAIINYTNSSTVHFKL
SPTYVLYMACRYVLSSQYRPDVSPTERTHKVIAIVNKMVSMMEGVIQEVDQVDQKQKNIA
GALAFWMANASELLNFIKQDRDLSRITLDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAF
LDDPEENSLQRPKIDDVLHTLTGAMALLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTD
PESGLCSHYWGAIIRQQLGHVEAWAEKQGLELAADCHLSRIVQATTLLTMDKYAPEDTPN
INSTCFKLNSLQLQALLQNYHCAPDEPFIPTGLVQEVVTVAENTADELARSDGREVQLQE
DPDLQLPFLLPEDGYSCDVVRNVPNGLQEFLDPLCQRGFCRLIPHARSPGTWTIYFEGAD
YESHLLRENTELAQPLRKEPEIITVTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGA
ADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQGAIYHGLATLLNQ
PSPMMQRVSDRRGSGKPRPKSEGFELYNNSAQNGSPESPQLPWAEYSEPKKLPGDDRLMK
NRADHRSSPNVANQPPSPGGKNAYAPGAAAKITSVSTGNLCTEEQTPPPRPEAYPIPTQT
YTREYFTFPASRSQDRVAPPQNQWPNYEEKPHVHADGHQSGPAMQRVTRSQEELREDKAY
HQLERHRLEAVLGRKSDSDVWIHGQAAAERRKREEQQRWYEKEKARLEEERDRKRREQER
KLGQMRSQALNPAAFSPVTVAHAKPEKPSTLQRPQDTVIRELQPQQQPRTIERRDLQYIT
VSREELSSGDSLSPDPWKRDAREKLEKQQQMHIVDMLSREIRELQSKPERSAEDSDRLRK
LMLEWQFQKRLQESQQKDEDDEEEEDDDVDTMLIMQRLEAERRAPQTGLPAISVLDLLQD
EERRRQRQLDDMRRREAEDRARQEEERTKRDAEDKRRQEEGYXSRLEAESPCLRVCLPCT
AVAYLCRHSACRGGDGFRRPLSEAGCRPRHLSSHLKNLVLSLSKDLLFFCGPRISMMVRF
WEVCGYFNFDFFFYGKGPDSSVGSSGAVIGARDGSRDPRERLAKSHDADLPGNSGAPENL
TFKERQRLFSQGQDVSNKVKASRKLTELENELNTK
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atggccttacttcagcccaaggatttggagtttcatggcgtaatgagattttattttcaa
gataaagctgctggaaacttcgcaacaaaatgcattcgggtctctagtacggccaccaca
caagacgtgatcgagacgctggcagagaaattccgccctgacatgcggatgctgtcgtcc
ccaaagtactccctctacgaagttcacgtcagcggagaagaaagaagattggatatagat
gagaaaccccttgttgtgcagttgaattggaataaagatgaccgagagggcagattcgtt
cttaagaacgagaacgatgcccttcctcctaagaaggctcaaagcaacggacctgaaaag
caggagaaagaaggtgttatccagaacttcaagagaactctctccaagaaagagaagaag
gagaaaaagaagagagagaaagaggcagtgaggcaggcatctgagaaagatgatcggcct
ttccaaggggatgacctcttgcgtcgagagggaccgggttgtccacagtcccgatgggca
ccaggtaccagtgcgtgcagaccctggcctgctgcggagcgagccggggagcagaccagc
ttcacgcgcacgatctccaaccccgaggtggtcatgaagcgccggcggcagcagaagctg
gagaggcggatgcaggagttccggagctcggacggacggccggactcaggtggaacactg
agaatttatgcagacagcttaaaaccgaacattccctacaagacaatcctgctgtccacc
acggatcctgctgactttgctgtggccgaggctctagagaaatacggtctggagaaggag
aaccctaaagattactgcatcgcccgggttatgctgcctcctggagcccagcattcggat
gaaaacggtgctaaagaaacgatcctcgacgatgacgagtgtcctttacagatcttcagg
gagtggccaactgaccgaggggttttagtctttcagttgaagaggaggccgccagactac
gtcccgaagaaaacgaagaaaaatgtcgacgggaagctggtgaaagggaaannnnnnnnn
nnnnnnnnnnnnnnnnnnnnnngagccgagggttccggctacggctcagcacttccgccc
gagaagttgccctacctggtggagctcagcccagatggttctgactccagggacaagccc
aagctttaccgccttcagttgagcgtcactgaggtcgggacagagaagttcgaggagaac
tccatccagctgtttggatcaggaattcagccccatcactgtgacctcacaaacatggat
ggagttgtcaccgtgactccgagaagcatggacgccgagacgtacgtggaaggacagcgc
atctccgagacgaccatgctgcagagcgggatgaaagtgcagtttggggcgtcacacgtg
ttcaagtttgtggaccccagccaggaccacgctgtggccaagagacccgtggatggaggc
ctgacggccaagggccccagacagaagcctggaattgttcaggagacaactttcgatttg
gggggagatgttcacagcggggcagcgctgccagcgagcaagagcgccaccaggctggac
agcgacagagaaaacagatctgatgttaagaggcggcctctttcttttttcagaactcag
gatgctcttgggcctgaactcatactgcctgcaagcattgaattcagggaaagttctgaa
gattcatttttatctgccattataaattatactaatagctctacagtccattttaagttg
tcacctacatatgtattatatatggcatgtcggtatgtattgtcgagccagtacagaccc
gatgtcagtcctacagagcgtactcacaaagtgattgccatagtcaacaagatggtgagc
atgatggagggggtgattcaggaagtagaccaggttgatcagaaacagaagaatatcgca
ggggcgcttgctttctggatggccaacgcatctgagcttctcaacttcattaagcaggac
cgagatcttagtcgaatcacattggacgcccaagatgttttagcacacttggttcaaatg
gcgtttaaatatctggttcattgtcttcagtcagaactgaataactacatgccggctttt
ctggatgaccctgaagagaacagtctacaaagaccaaaaatagatgacgtcttgcacacg
ctcacgggagcgatggcgctgctgaggcgctgcagggtcaatgctgctctgaccatccag
cttttctctcagctcttccacttcatcaacatgtggctcttcaacagattggtgaccgac
cccgagtcgggactgtgctctcactattggggggcgatcatccgccagcagctggggcac
gtggaagcctgggcagagaagcagggattagagctggcggccgactgtcacctgagccgg
atagtgcaggcgaccactttgctcaccatggataaatatgctcctgaggacaccccaaat
atcaacagcacctgctttaagttaaattcactgcagctgcaggccttgctacagaattac
cactgtgcgcccgatgagcccttcatccccacgggtttagtacaagaagtagtgaccgtg
gccgaaaacacggccgacgagctggcgcgcagcgatgggcgggaggtgcagctacaagag
gaccctgatctgcagctgccttttcttctgccggaagacggctattcttgtgacgtcgtc
aggaacgttccaaacggtttacaagaatttctggaccctctgtgccagagagggttttgc
aggttaattcctcatgcacgttcaccaggtacttggacgatctattttgaaggtgcggat
tatgagagccatcttctgcgtgagaacacagaactggctcagcctctgcggaaagaacct
gaaataatcactgtgactctcaaaaagcaaaacggaatgggcctcagcattgtcgcggca
aagggtgctggtcaagataaacttggaatctatgtcaagtctgtcgtaaaaggaggtgct
gcagatgtggacggacgcctggccgcaggtgaccagctcctcagtgtggatggacgaagt
ctggtaggactctctcaagaaagggcagcagaactcatgacaaggaccagttccgtggtg
acactggaagtagccaagcaaggagcgatctaccacggcctggccaccctgctcaatcag
ccgtccccgatgatgcagagagtttcagaccgtcgtggctcaggtaaaccccgaccaaag
agtgaaggtttcgagctctataacaattcagctcaaaacgggtcacccgagagccctcag
ctgccttgggcagaatacagcgaaccgaagaagctccctggcgatgacaggctgatgaag
aaccgggctgaccaccgctccagccccaacgtggcaaatcagccccccagtcccggaggg
aaaaacgcgtacgcccctggagcagccgcgaagatcacgtccgtctccaccggaaacctc
tgcactgaggagcagacccctccacctcgacctgaggcctatcccatccccacccagacg
tacaccagggagtacttcaccttcccggcctccaggtcccaggaccgcgtggctccccct
cagaaccagtggcccaattacgaggagaagccgcacgtgcacgcagatggtcatcagtcc
ggccccgcgatgcagcgcgtcacccgctcccaggaggaacttcgggaggataaagcttac
caccaactcgagcggcatcggctggaggcggtgctgggtcgcaagtccgacagcgacgtg
tggatccacggccaggcggcggcggagcggaggaaacgggaggagcagcagcgctggtac
gagaaggagaaggcccgcctggaggaggagcgggacaggaagcgccgggagcaggagcgg
aagctgggccagatgcgctcccaggccctgaacccggccgcgttctccccggtgaccgtc
gcgcacgcgaagccggagaaaccttccacgctccagaggccccaggacacggtcatccgg
gagctgcagccccagcagcagccacgcaccatcgagcgccgagacttgcagtacatcacg
gtcagcagagaggagctgtcctcgggggacagcctgtcccccgacccctggaagcgggac
gccagggagaagctggagaagcagcagcagatgcacatcgtggacatgctgagcagggag
atccgggagctccagagcaagcccgagcgcagcgccgaggacagcgaccgcctgcgcaag
ctcatgctggagtggcagttccagaagagactgcaggagtcccagcagaaggacgaggac
gacgaggaggaggaggacgacgacgtggacaccatgctgatcatgcagcgcctcgaggct
gagcggagagctccccagactggtctgccagcaatctctgttctagatttgttacaggac
gaggagcggcggcggcagcggcagctggacgacatgcgcaggcgggaagcagaggaccgc
gccaggcaggaggaggagaggacgaagcgagacgccgaagacaagaggcgacaggaagaa
ggttattaaagccgcctggaagccgagagtccctgcctccgggtgtgtctgccctgcacg
gctgtggcctacctgtgccgtcacagcgcctgtcggggcggtgatggatttcgcaggccg
ctgagcgaagccggctgcagaccaaggcatctttcgtctcatttgaagaaccttgtgctt
tcactcagtaaagacctcctcttcttctgtgggccccgcatctcgatgatggtaaggttt
tgggaagtatgcgggtactttaactttgactttttcttttatggaaaaggaccagactct
tccgtgggatcttccggggcagtgatcggtgcccgtgacggctcccgggacccgagagag
aggctggcgaaaagccatgatgcagatttacctggaaattccggagcccctgagaacttg
acattcaaagagcgccagcggctgttctcacaaggtcaagatgtgtccaataaagtgaaa
gcctctcgtaaattaacagaactggaaaacgaactgaacacaaagtga
DBGET
integrated database retrieval system
