Panthera tigris altaica (Amur tiger): 102949888
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Entry
102949888 CDS
T02988
Symbol
YTHDC2
Name
(RefSeq) YTH domain containing 2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
ptg
Panthera tigris altaica (Amur tiger)
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptg03041
]
102949888 (YTHDC2)
Enzymes [BR:
ptg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102949888 (YTHDC2)
Spliceosome [BR:
ptg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102949888 (YTHDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
OB_NTP_bind
HA2_C
Helicase_C
R3H
DEAD
Ank_2
AAA_19
HA2_N
nSTAND3
AAA_22
Ank
ATPase
PhoH
AAA_16
AAA_7
UvrD-helicase
AAA_29
T2SSE
ABC_tran
SRP54
AAA_23
Motif
Other DBs
NCBI-GeneID:
102949888
NCBI-ProteinID:
XP_007083173
LinkDB
All DBs
Position
Un
AA seq
1367 aa
AA seq
DB search
MEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTVKKKDGSETAHAMMTCNLTHNT
KHAVRSLIQRFPVTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGIPQIPVKRGE
SEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRI
FCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAG
DSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSC
PVIYIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKKEKQREEKQQTTLTEWYSAQENTFK
PESQRQRTVPNVTEEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKDVD
AFAQVFHLILTENVSVDYRHSETSATALMVAAGRGFSSQVEQLISMGANVHSKASNGWMA
LDWAKHFGQTEIVDLLESYSASLEFGNLDESSLVHTNGSDLSAEDRELLKAYHHSFDDEK
VDLDLIMHLLYNICHGCDAGAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHS
NMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTML
KMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLL
APVNCPIADFLMKAPEPPPALIVRNAVHMLKTIDAMDAWEDLTELGYHLADLPVEPHLGK
MVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRA
FQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNT
NSENWAVVKAALVAGMYPNVVHVDRENVVLTGPKEKKVRFHPTSVLSQPQYKKIPPANGQ
AAAIQALPTDWLIYDEMTRAHRIANIRCCSAVTPVTILVFCGPARLASNALQEPSSFRAD
GVPNDSSDSEMEDRTTANLAALKLDEWLNFKLEPEAASLLLQLRQKWHSLFLRRMRAPSK
PWSQVDEATVRAIIAVLSTEEQCAGLQQPSGIGQRPRPMSSEELPLASSWRSNNSRKTSA
DTEFSDESATAERVLMKSPSPALHPPQKYKDRGILHPKRSTDDRSDQSSVKSTDSSSYPS
PCASPSPPPSGKGSKSPSPRPNMPIRYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRA
FWESSMVYLVFSVQGSGHFQGFSRMSSEIGREKSQDWGSAGLGGVFKVEWVRKESLPFQF
AHHLLNPWNDNKKVQISRDGQELEPQVGEQLLQLWERLPSGEKTTTD
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atggaatttccttcctctttgaccagtactgaaagagcctttattcatcgattgagtcag
tctcttggtttggtttctaaaagtaaaggaaagggagcaaatagatacctaactgtgaag
aagaaagatggatcagaaacagctcatgcaatgatgacctgtaatttgactcataataca
aaacatgctgttaggagcctaattcaaagatttcctgtcaccaataaagagcgtactgaa
cttctgcctaaaacagaaagaggaaatgtgtttgcagttgaagctgaaaaccgggaaatg
agcaaaacgagtgggcgactcaacaatggcatacctcagattccagtgaaaagaggagaa
tctgaatttgattctttcaggcagtctctgccagtgtttgagaaacaagaagaaattgtt
aaaataattaaagaaaataaagtagttttgatcgtaggagaaactgggtctggaaagact
acacagattcctcagttccttttagatgattgctttaaaaatggtatcccctgccgtata
ttttgtacccagccaagaaggttagcagctattgctgtggctgaaagagttgctgcagag
agaagagaaaggattggtcaaacgattggatatcagatccgattagaaagcagggtttct
ccaaagacacttctgacattttgcactaatggggtattgcttcgtacattgatggcggga
gatagtacattgtcgactgtgacacatgttattgtggacgaagtacatgaaagggatcga
tttagtgattttttacttacaaagttaagagatctgttgcaaaagcacccaactttgaaa
cttattctttctagtgccgccttggatgtaaatctttttataagatattttggaagttgt
ccagtgatctatatacagggaagaccttttgaagtaaaagaaatgtttctggaagacatc
ttaagaactactggatacacaaacaaagaaatgttaaaatacaaaaaggaaaaacaacga
gaagagaagcaacaaactactcttacagaatggtattcggctcaagagaatacattcaag
cctgaatctcagaggcagagaactgttccgaatgtgactgaagagtatgatttgttggat
gatggtggtgatgctgtcttcagccagttgacagaaaaagatgtgaattgccttgaacca
tggttaataaaggaaatggatgcttgtctttctgacatatggctacataaagatgtcgat
gccttcgctcaggtctttcaccttattttaactgaaaatgttagcgttgattataggcat
agcgaaaccagtgcaacagctctgatggttgctgctggacgaggtttttcaagtcaagta
gagcagttaattagcatgggagccaacgtgcacagtaaagcatcaaatggctggatggct
ttagattgggctaaacactttggacagactgaaattgtggatcttctggaatcttacagt
gcttcgctggaatttggaaatctagatgaaagttctctggtacacacaaatgggagtgac
ctcagtgcagaagacagagagctcctgaaagcttatcatcacagttttgatgatgaaaaa
gtagacttggatttgatcatgcaccttctatacaatatctgccatggttgcgatgctgga
gcaatattaattttcctgcctggatatgatgaaattgttggactgcgggatcgcatcctg
tttgatgacaagcggtttgctgataacacacacagatatcaagtctttatgcttcattca
aatatgcaaacatctgatcaaaagaaggtattgaaaaacccgcctgctggtgttcgaaaa
attatcctttccaccaatattgctgaaaccagcatcacagtcaatgatgttgtctttgtt
attgattctggtaaggtgaaagagaaatccttcgatgcactgaattttgttacaatgtta
aaaatggtgtggatttccaaagctagtgccatacaacgaaaaggcagggcagggagatgt
agacctggaatttgtttccggctgttcagcagactccgattccagaatatgttggaattt
cagactccagaacttttgagaatgccattacaggaactttgtttacatactaagctatta
gccccagttaattgtcctattgccgatttcctaatgaaagctcctgaacctccacctgct
ttaattgtaagaaatgctgtacacatgcttaagacaatagatgcaatggacgcgtgggaa
gatctcactgagcttgggtatcatttggctgacctgcccgtagaaccacatcttggaaaa
atggtcctgtgtgctgtcgtgttaaagtgtctggaccccatccttacaattgcctgcacc
ctggcctatcgagacccttttgtactgccaacccaggcctctcaaaagcgcgcagctatg
ctctgtaggaaacgcttcactgcaggaactttcagtgaccacatggcacttctcagagca
ttccaggcatggcagaaagcacgaagtgatgggtgggagcgagccttttgcgaaaagaat
tttctttcgcaagctaccatggaaataatcattggtatgagaactcagttgcttggtcag
cttagagcatcaggttttgttagagcacgaggcggtggtgacattcgagatgttaacaca
aattccgagaactgggctgtcgttaaagctgcattggtggcaggcatgtatcctaatgta
gtccatgtggacagagagaatgtagtactgacagggccaaaggagaaaaaagttcggttt
catcccacttcagttctcagtcagcctcagtataaaaagattcctccagccaatggtcag
gctgcagcgattcaagcactacctacagattggcttatttatgatgaaatgaccagggcc
catagaatagctaatattcgatgttgttcagcagtgacacccgtcactatattggtattc
tgtggaccagctagattggcaagtaacgctcttcaagaaccttcatcatttcgagcggat
ggtgttcctaatgacagtagtgatagtgaaatggaggacagaaccactgctaatttggca
gctttgaaacttgatgagtggctcaatttcaaactagagcctgaggcagccagtttattg
ctgcagctcagacagaagtggcacagcttatttttacgccgaatgagagctccatccaaa
ccttggtctcaagttgatgaagctaccgtaagagcaattatagctgttttaagcactgag
gaacagtgtgcaggtttacagcagccgtctgggataggccagaggccaaggcctatgtct
tcagaagaacttcctttggcatcatcttggaggtccaataatagcaggaaaacttccgca
gatactgaattttctgatgagtctgctactgcagaaagagtattgatgaaatctccatct
ccagcactacacccacctcagaagtacaaagatagaggaattttacatcctaaacgaagc
actgatgaccgatcagatcaatcttctgtgaaatctacagacagcagtagttacccgagt
ccttgtgccagcccttctcctccaccctcaggaaagggctcaaaatctccttcaccaaga
ccaaacatgcctattcgatacttcataatgaagagtagcaatttgagaaaccttgaaatt
tctcagcagaagggtatctggtctacaacccctagtaatgagcggaagctaaatcgagcc
ttttgggaaagcagcatggtttacttggtattttctgttcaaggatctggacatttccag
ggattttctaggatgtcttcggagataggaagggagaagagccaggactggggctccgct
ggactgggaggagtgtttaaggtggagtgggtccggaaggagagtcttcccttccagttt
gcacaccatctacttaacccctggaacgacaacaagaaggtccagatcagcagagacggg
caggagctcgagcctcaggttggtgaacagttgctccagttatgggaacgccttccgtcg
ggagaaaaaaccacgactgattga
DBGET
integrated database retrieval system
