KEGG   Panthera tigris altaica (Amur tiger): 102950241
Entry
102950241         CDS       T02988                                 
Symbol
RPA1
Name
(RefSeq) replication protein A1
  KO
K07466  replication factor A1
Organism
ptg  Panthera tigris altaica (Amur tiger)
Pathway
ptg03030  DNA replication
ptg03420  Nucleotide excision repair
ptg03430  Mismatch repair
ptg03440  Homologous recombination
ptg03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ptg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    102950241 (RPA1)
   03420 Nucleotide excision repair
    102950241 (RPA1)
   03430 Mismatch repair
    102950241 (RPA1)
   03440 Homologous recombination
    102950241 (RPA1)
   03460 Fanconi anemia pathway
    102950241 (RPA1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ptg03000]
    102950241 (RPA1)
   03032 DNA replication proteins [BR:ptg03032]
    102950241 (RPA1)
   03400 DNA repair and recombination proteins [BR:ptg03400]
    102950241 (RPA1)
Transcription factors [BR:ptg03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    102950241 (RPA1)
DNA replication proteins [BR:ptg03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    102950241 (RPA1)
DNA repair and recombination proteins [BR:ptg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     102950241 (RPA1)
   MMR (mismatch excision repair)
     102950241 (RPA1)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     102950241 (RPA1)
SSDB
Motif
Pfam: Rep_fac-A_C REPA_OB_2 Rep-A_N tRNA_anti-codon DUF223 Ubiquitin_At1g33420
Other DBs
NCBI-GeneID: 102950241
NCBI-ProteinID: XP_007076183
UniProt: A0A8C9JI31
LinkDB
Position
Un
AA seq 618 aa
MVGHLSEGAIAAIMQQGDTSIKPVLQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNHLVEGEQLSSNCICQINRFIVNTLKDGRRVIILMELDILKSAEAVGLKIGNPVPYNE
GHGQQQVVPSPASAANPPASKPQQQNGSSGMGSTASKTYGASKIFGKAGATNLANTGSGG
TQVKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESGEIRATAFN
EQVDKFFPLIDMNKVYYISKGTLKIANKQFTAVKNDYEMTFNNETSVVPCEDGHHLPTVQ
FDFTAIGDLENKSKDSLIDVIGICKSYEDATKIIVKSNNREVSKRDIYLMDMSGKVVTTT
LWGEDADRFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRGWFDSEG
QALDGVSISDLKSGGTGGSNTNWKTLYEAKSENLGHGDKADYFSCVATVVFLRKENCMYQ
ACPAQDCFKKVIDQQNGLYRCEKCDSEFPSFKYRMILSANIADFQENQWVTCFQESAEAI
IGQTTAYIGELKEKNEQAFEEVFQNANFRTFIFKIRVKLETYNDESRIKATVMDVKPVDY
REYGRRLIMNIKRNALMM
NT seq 1857 nt   +upstreamnt  +downstreamnt
atggtgggccacctgagcgagggggccattgcggccataatgcaacagggagacacttcc
ataaaacctgtcctccaggtcattaacatccgtcccatcactacagggaatagtccaccc
cgttatcgactgcttatgagtgatggattgaacactctatcctctttcatgttggcaaca
cagttgaaccatctcgttgagggagaacaattgtctagcaactgtatttgccagattaac
cgatttattgttaacactctgaaagatggaaggagagtaattattttgatggagttagac
attttgaaatcagctgaagcagttggattaaagattggcaatcccgtgccctataatgaa
ggacacgggcagcagcaggtagttccttctccggcctcagcagccaacccgccagccagc
aagccccagcaacagaatgggagctcagggatgggttccactgcatctaagacttatggt
gcctcaaagatatttggaaaagctggagctaccaacctagcaaacacaggttctggagga
acacaggtcaaagtggtacccatcgccagcctcaccccttaccaatccaagtggactatc
tgtgctcgagttaccaacaaaagtcagatccgtacctggagtaattcccggggggaaggg
aagctcttctccctagaactagttgatgaaagtggtgaaatcagagctactgctttcaac
gagcaagtggacaagttttttccccttattgacatgaacaaggtctattacatctctaaa
ggcaccctgaagattgctaacaaacagttcacagctgttaaaaatgactatgagatgacc
ttcaataatgagacttccgtcgtgccctgtgaagatggtcatcacttaccaacagttcag
tttgatttcacagcgattggtgacctggagaataagtctaaagattctctgatagacgta
attgggatctgcaagagctatgaagatgccaccaaaatcatagtgaagtctaacaacaga
gaagtttcgaagagagacatctatttgatggacatgtcggggaaagtggtgaccactact
ctgtggggagaagatgctgatagatttgatggttctagacaacctgtgatggctatcaaa
ggagccagagtttctgattttggtggacggagcctctctgtactgtcttcaagcacggtc
attgtgaatcctgacatcccggaggcctataagcttcgtggatggtttgactctgaagga
caagccttagatggtgtttccatctctgatctaaagagtggaggaacaggaggtagcaac
accaactggaaaactctatatgaggctaaatcagagaacctaggccatggtgacaaggcc
gactattttagctgtgtggcgacagttgtgtttcttcgcaaagagaactgtatgtatcaa
gcctgcccagctcaggactgctttaagaaagtgattgatcaacagaatggattgtaccgc
tgtgagaagtgtgatagtgaatttcccagcttcaagtaccgcatgatcctgtcagcaaat
attgctgattttcaagagaatcagtgggtcacctgtttccaggagtctgcggaggccatc
attggacaaaccactgcttatattggggagttaaaagagaagaatgagcaagcatttgag
gaagttttccagaatgccaacttccgaactttcatattcaagatcagggtgaaactagag
acctacaatgatgagtctcgaattaaggccactgtgatggacgtgaagcccgtggactac
agagaatatggcagaaggctgatcatgaacatcaagagaaatgcactgatgatgtga

DBGET integrated database retrieval system