Panthera tigris altaica (Amur tiger): 102950241
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Entry
102950241 CDS
T02988
Symbol
RPA1
Name
(RefSeq) replication protein A1
KO
K07466
replication factor A1
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg03030
DNA replication
ptg03420
Nucleotide excision repair
ptg03430
Mismatch repair
ptg03440
Homologous recombination
ptg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102950241 (RPA1)
03420 Nucleotide excision repair
102950241 (RPA1)
03430 Mismatch repair
102950241 (RPA1)
03440 Homologous recombination
102950241 (RPA1)
03460 Fanconi anemia pathway
102950241 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptg03000
]
102950241 (RPA1)
03032 DNA replication proteins [BR:
ptg03032
]
102950241 (RPA1)
03400 DNA repair and recombination proteins [BR:
ptg03400
]
102950241 (RPA1)
Transcription factors [BR:
ptg03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
102950241 (RPA1)
DNA replication proteins [BR:
ptg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
102950241 (RPA1)
DNA repair and recombination proteins [BR:
ptg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
102950241 (RPA1)
MMR (mismatch excision repair)
102950241 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
102950241 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Ubiquitin_At1g33420
Motif
Other DBs
NCBI-GeneID:
102950241
NCBI-ProteinID:
XP_007076183
UniProt:
A0A8C9JI31
LinkDB
All DBs
Position
Un
AA seq
618 aa
AA seq
DB search
MVGHLSEGAIAAIMQQGDTSIKPVLQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNHLVEGEQLSSNCICQINRFIVNTLKDGRRVIILMELDILKSAEAVGLKIGNPVPYNE
GHGQQQVVPSPASAANPPASKPQQQNGSSGMGSTASKTYGASKIFGKAGATNLANTGSGG
TQVKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESGEIRATAFN
EQVDKFFPLIDMNKVYYISKGTLKIANKQFTAVKNDYEMTFNNETSVVPCEDGHHLPTVQ
FDFTAIGDLENKSKDSLIDVIGICKSYEDATKIIVKSNNREVSKRDIYLMDMSGKVVTTT
LWGEDADRFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRGWFDSEG
QALDGVSISDLKSGGTGGSNTNWKTLYEAKSENLGHGDKADYFSCVATVVFLRKENCMYQ
ACPAQDCFKKVIDQQNGLYRCEKCDSEFPSFKYRMILSANIADFQENQWVTCFQESAEAI
IGQTTAYIGELKEKNEQAFEEVFQNANFRTFIFKIRVKLETYNDESRIKATVMDVKPVDY
REYGRRLIMNIKRNALMM
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggtgggccacctgagcgagggggccattgcggccataatgcaacagggagacacttcc
ataaaacctgtcctccaggtcattaacatccgtcccatcactacagggaatagtccaccc
cgttatcgactgcttatgagtgatggattgaacactctatcctctttcatgttggcaaca
cagttgaaccatctcgttgagggagaacaattgtctagcaactgtatttgccagattaac
cgatttattgttaacactctgaaagatggaaggagagtaattattttgatggagttagac
attttgaaatcagctgaagcagttggattaaagattggcaatcccgtgccctataatgaa
ggacacgggcagcagcaggtagttccttctccggcctcagcagccaacccgccagccagc
aagccccagcaacagaatgggagctcagggatgggttccactgcatctaagacttatggt
gcctcaaagatatttggaaaagctggagctaccaacctagcaaacacaggttctggagga
acacaggtcaaagtggtacccatcgccagcctcaccccttaccaatccaagtggactatc
tgtgctcgagttaccaacaaaagtcagatccgtacctggagtaattcccggggggaaggg
aagctcttctccctagaactagttgatgaaagtggtgaaatcagagctactgctttcaac
gagcaagtggacaagttttttccccttattgacatgaacaaggtctattacatctctaaa
ggcaccctgaagattgctaacaaacagttcacagctgttaaaaatgactatgagatgacc
ttcaataatgagacttccgtcgtgccctgtgaagatggtcatcacttaccaacagttcag
tttgatttcacagcgattggtgacctggagaataagtctaaagattctctgatagacgta
attgggatctgcaagagctatgaagatgccaccaaaatcatagtgaagtctaacaacaga
gaagtttcgaagagagacatctatttgatggacatgtcggggaaagtggtgaccactact
ctgtggggagaagatgctgatagatttgatggttctagacaacctgtgatggctatcaaa
ggagccagagtttctgattttggtggacggagcctctctgtactgtcttcaagcacggtc
attgtgaatcctgacatcccggaggcctataagcttcgtggatggtttgactctgaagga
caagccttagatggtgtttccatctctgatctaaagagtggaggaacaggaggtagcaac
accaactggaaaactctatatgaggctaaatcagagaacctaggccatggtgacaaggcc
gactattttagctgtgtggcgacagttgtgtttcttcgcaaagagaactgtatgtatcaa
gcctgcccagctcaggactgctttaagaaagtgattgatcaacagaatggattgtaccgc
tgtgagaagtgtgatagtgaatttcccagcttcaagtaccgcatgatcctgtcagcaaat
attgctgattttcaagagaatcagtgggtcacctgtttccaggagtctgcggaggccatc
attggacaaaccactgcttatattggggagttaaaagagaagaatgagcaagcatttgag
gaagttttccagaatgccaacttccgaactttcatattcaagatcagggtgaaactagag
acctacaatgatgagtctcgaattaaggccactgtgatggacgtgaagcccgtggactac
agagaatatggcagaaggctgatcatgaacatcaagagaaatgcactgatgatgtga
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