Panthera tigris altaica (Amur tiger): 102950715
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Entry
102950715 CDS
T02988
Symbol
SHANK1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
102950715 (SHANK1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
SH3_2
SAM_2
PDZ_6
PDZ
SH3_1
SH3_9
SAM_PNT
FERM_f0
Defensin_2
Motif
Other DBs
NCBI-GeneID:
102950715
NCBI-ProteinID:
XP_015395405
LinkDB
All DBs
Position
Un
AA seq
1249 aa
AA seq
DB search
MTHSPASSEDEERHSASECPEGGSETDSSPDGPSRGPRGTRGQGSGAPGSLASTRGLQGR
SMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLF
QPATSGRDANFLXXXXXXXXXXERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLA
KLHTKTGLKKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRT
LCLGGAHIDFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGG
DPRCCELLLYNRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALH
ICALYNKETCARILLYRGANKDVKNNNGQTPFQVAVIAGNFELGELIRNHREQDVVPFQE
SPKYAARRRGPPGAGLTVPPALLGANSDTSMALPDWMVFAAPGTSSSGAPGPTSGPQGQS
QPSAPSTKLSSGTLRSASSPRGARARSPSPGRHPEEAKRQPRGRPSSSGTPREGPAGGTG
GSGGPGGSLGSRGRRRKLYSAVPGRSFMAVKSYQAQAEGEISLSKGEKIKVLSIGEGGFW
EGQVKGRIGWFPSDCLEEVANRSQEGKQESRSDKAKRLFRHYTVGSYDSFDAPRSLMDGI
GPGSDYIIKEKSVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVA
WRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEAVHKKAP
QQAKRLPPPAISLRSKSMTSELEEMEYEQQPPPVPSMEKKRTVYQMALNKLDEILAAAQQ
TISASESPGPGGLASLGKHRPKGFFATESSFDPHHRSQPSYERPSYLPPGPGLMLRQKSI
GAAEDDRPYLAPPAMKFSRSLSVPGSEDIPPPVPLPSASSLPRKLLPWEEGPGPPPPPLP
GPLAQPQASALATVKASIISELSSKLQQFGGSSAAGGALPWARGGSGGSGDSHHGGASYV
PERTSSLQRQRQYRVVVKSSDFGAIGAPPPAAAAPGATSPSASSSTSTRHLQGVEFEMRP
PLLRRAPSPSLLPASEHKVSPAPRPSSLPILPSGPLYPGLFDIRGSPTGGAGGSADPFAP
VFVPPHPGMSGGLGGALSGASRSLSPTRLLSLPPDKPFGAKPLGFWTKFDVADWLEWLGL
AEHRAQFLDHEIDGSHLPALTKEDYVDLGVTRVGHRMNIDRALKFFLER
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagccccgcgtcaagcgaggacgaggaacgccacagtgccagcgagtgtccc
gaggggggctcagagacagacagctccccagacgggcccagcagaggcccccgggggacc
cggggccagggcagcggggcacctggtagtctggcctccacccgaggcctccagggccgc
tccatgtctgtcccggacgacgcccacttcagcatgatggtcttcaggattggcatcccg
gacctgcaccagacaaaatgtctccgcttcaaccctgatgccaccatctggacagccaag
caacaggtgctctgcgccctgagcgagagcctgcaggatgtgctcaactacggtctgttc
cagccggccacctccggccgcgatgccaactttctgnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnggagcggctgctccgagagtacccccagtcttttgagaagggggtgccctacctg
gagttccgatacaagacccgggtttacaaacagaccaacctggatgagaagcagctggct
aaattgcacacgaagacggggttgaagaagttcctggaatacgtgcagctcgggacgtct
gacaaggtggcaaggctgctggacaaggggctggaccccaattatcacgactcggattcg
ggagagacccccctgacgctggcagcccagaccgaaggctccgtagaggtgattcgaacc
ctgtgcctgggaggggcccacatcgacttccgggcccgggatggcatgaccgcgctgcac
aaggccgcgtgtgcccgtcactgcctggctctcacggcactcctggaccttgggggctcc
cccaactacaaggaccgccgaggcctgacccctctgttccatacggctatggtggggggc
gacccccgctgctgcgagctgctcctgtacaacagggcccagctgggcatagctgatgag
aacggctggcaggagattcaccaggcctgccagcgaggccactctcagcacctggaacac
ctgctcttctatggggctgagccgggagcccagaatgcctcggggaacacggccttgcac
atctgcgccctctacaataaggagacctgtgctaggatcctcctctatcgaggagctaac
aaggatgtgaagaataacaatggacagacccccttccaggtggctgtgatcgctgggaat
tttgaactgggggagctgatccgaaaccatcgagaacaggatgtggtgcccttccaggag
tcccccaagtacgcagcccggcgacggggacccccaggcgcagggctgacagtgcccccg
gcactgcttggggccaacagtgataccagcatggccctgcctgactggatggtgtttgcc
gccccggggacctcgtcctctggggcccccggccctacctcagggccccagggtcagtcg
cagccctcggcccccagcaccaagctcagcagtgggaccctccgaagtgccagcagcccc
cggggcgcccgggcccgctccccatcccctgggaggcatcctgaagaggccaagaggcag
ccccgtggacggcccagctccagcgggacgcccagggaagggcctgcagggggcacaggg
ggctcagggggccctgggggctccctgggcagccgcgggaggcgcaggaagctctactcg
gcggtacccggacgctccttcatggccgtgaagtcctaccaggcccaagcggagggggag
atctccctgagcaagggcgagaagatcaaagtgcttagcatcggggaaggaggcttctgg
gaaggccaggtcaaaggtcgcattggctggttcccctctgactgcctggaagaggtggca
aaccgctcccaggagggaaagcaagaaagccgcagtgacaaggcaaagagactcttccgg
cattataccgtgggctcctacgacagctttgatgccccaagaagcttgatggatgggatt
ggcccagggagcgattacatcattaaggagaagtcagtcttgctgcagaagaaggacagt
gaggggtttgggttcgtgctccggggggccaaggcgcagacccccatcgaggagttcacc
cccaccccggccttcccggcgctgcagtatctggagtccgtggatgagggtggcgtggca
tggcgagctggactgcggatgggagacttcctcatcgaggtgaacgggcagaatgtggtg
aaggtcggccaccgacaggtggtgaacatgatccgccaagggggcaacacgctgatggtc
aaggtggtgatggtcaccaggcacccggacatggatgaggctgtccataagaaagcaccc
cagcaggctaagcggctcccgcccccagccatctctcttcgttccaagtccatgacctca
gagctggaggagatggagtacgagcagcagcctccgccggtgcccagcatggagaaaaag
cggaccgtgtatcagatggctctcaacaaactggatgaaattttggcggcagctcagcag
accatcagtgcaagcgagagtcctggacctggtggccttgcgtcgctgggcaaacaccgg
cccaaaggcttctttgccaccgagtcaagcttcgatccgcaccaccgctcccagccaagt
tatgaacgtccttcttacctgcctccaggacccgggcttatgctccggcaaaaatctatc
ggggctgcagaagatgatagaccctacctagcacccccagccatgaagttcagccgcagc
ctgtctgtgcccggctcggaggacatccctccgccggtgcccttgccttcagcttcctct
ctgcctcggaagctgctgccctgggaggagggcccgggcccaccgccaccacccctgccc
gggcccttggcccagcctcaggcctcagccttggccacagtaaaagccagcatcatcagt
gaactcagctccaagcttcagcaatttgggggctcctcggcagctggtggcgctctgccc
tgggcccggggaggcagcgggggaagcggggacagccaccacgggggagccagctacgtc
cccgagaggacctcttccctgcagcggcagaggcagtatagagtagtggttaagagctca
gactttggtgccataggggccccccctcccgccgctgcagctccgggggccacgtcaccc
tcagcctcctcctccacgtccacccgccacctccagggcgtggagttcgagatgcggccg
cctctgctccgccgggcccccagcccctcactgctgcccgcctcggagcacaaggtcagc
cctgcgcccaggccctcgtccctgcccatcctgccttctggacccttgtacccgggcctc
tttgacatccgtggctccccaaccggaggggcaggaggctccgctgaccctttcgccccc
gtctttgtgccaccacaccccgggatgtcgggggggcttggtggagccttgtcaggggcc
tcccgctccctctcaccaacccgcctgctttcgctgcccccggacaagcccttcggcgct
aaacctctggggttctggaccaagttcgacgtggctgattggctcgagtggctgggcttg
gctgagcaccgagcacagttcctggaccacgagatcgatggctcccatctgcccgccttg
accaaggaagattacgtcgatctgggcgtgaccagggtgggccaccgcatgaacatcgac
cgggctctcaaatttttcctggagaggtga
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integrated database retrieval system
