Panthera tigris altaica (Amur tiger): 102951304
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Entry
102951304 CDS
T02988
Symbol
COL4A6
Name
(RefSeq) collagen type IV alpha 6 chain
KO
K06237
collagen type IV alpha
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg04151
PI3K-Akt signaling pathway
ptg04382
Cornified envelope formation
ptg04510
Focal adhesion
ptg04512
ECM-receptor interaction
ptg04518
Integrin signaling
ptg04820
Cytoskeleton in muscle cells
ptg04926
Relaxin signaling pathway
ptg04933
AGE-RAGE signaling pathway in diabetic complications
ptg04974
Protein digestion and absorption
ptg05146
Amoebiasis
ptg05165
Human papillomavirus infection
ptg05200
Pathways in cancer
ptg05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102951304 (COL4A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102951304 (COL4A6)
04518 Integrin signaling
102951304 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102951304 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102951304 (COL4A6)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
102951304 (COL4A6)
09154 Digestive system
04974 Protein digestion and absorption
102951304 (COL4A6)
09158 Development and regeneration
04382 Cornified envelope formation
102951304 (COL4A6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102951304 (COL4A6)
09162 Cancer: specific types
05222 Small cell lung cancer
102951304 (COL4A6)
09172 Infectious disease: viral
05165 Human papillomavirus infection
102951304 (COL4A6)
09174 Infectious disease: parasitic
05146 Amoebiasis
102951304 (COL4A6)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
102951304 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptg04147
]
102951304 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
ptg00536
]
102951304 (COL4A6)
Exosome [BR:
ptg04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
102951304 (COL4A6)
Glycosaminoglycan binding proteins [BR:
ptg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102951304 (COL4A6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
102951304
NCBI-ProteinID:
XP_007091117
LinkDB
All DBs
Position
Un
AA seq
1721 aa
AA seq
DB search
MHPGLWLLLVTLCLTEELAGAGEKKSYGKPCGGQDCSGGCKCFPEKGARGRPGPIGIQGP
TGPQGFAGPSGLSGLKGERGSPGPLGPYGPKGDKGPMGVPGFLGINGIPGHPGQPGPRGP
PGLDGCNGTQGDVGYPGPDGYPGLLGPPGLPGQKGSKGEPVLAQGSFKGIKGEPGLPGLD
GITGPQGAPGSPGAVGPMGPPGLQGPPGPPGFPGPDGNMGLGFQGEKGVKGDVGLPGPAG
PPPSTGELEFMGFPKGKKGSKGEPGLPGLPGISGPPGLPGFGTAGEKGEKGIPGLPGPRG
PMGLEGLRGPPGSQGRKGSSGFPGFNGFPGIKGEKGGIGLPGPDAYIDTDGAVISGYPGD
PGVPGLPGLKGDEGIQGLPGPSGLPGLPALPGVPGALGHQGVPGLKGDKGNPGRTTVGAA
GPPGRGGLPGLPGLAGPPGRTFETGTLQNTEPGFPGLRGERGPKGNPGLKGIKGDSGFCA
CDGGVPNIGPPGEPGLPGSQGLIGLPGLKGTRGDPGSGGTQGPSGTPGLFGPRGPAGHKG
EKGEPSLSSRSRMPGERGDPGPQGLPGKTGTPGKDGVPGLPGLPGLPGDGGQGFPGEKGL
PGLPGEKGRSGPAGPPGNGLPGSPGPRGLPGDQGINGLPGKQGLPGLPGDCCCRESIGKG
GLDTEGGVTLPCIIPGSYGPSGFPGAPGFPGPKGARGLPGIAGQPGLRGNKGKAGSPGLV
HLPELPGFPGPRGEKGLPGFPGLPGKDGLPGKIGSPGLPGSKGASGDIYGAENGAPGEQG
LQGLPGDRGFPGDPGLPGPKGLPGKSGLLGPKGERGSPGTPGHVGQPGSPGPDGRFDIKG
KPGLPGAPGFPGPSGHPGKKGLRGETGPPASAGKRGLPGLEGLPGSPGLIGFLGNSGLPG
STGLPGLPGPKGEKGSAGLVGFPGIPGLPGIPGASGLKGISGSAGKVGPSGRAGSAGKKG
DRGDPGPAGIPSPRPPILNLQLKGDKGSRGSAGSDGFPGPRGDKGETGPPGLPGLPGVPG
LPSIIKGLNGKPGPPGSIGLRGLPGLKGSPGITGFPGIPGASGSQGLNGAPGLPGASGLP
GSKGDQGQTLGISGSLGLKGQPGESGFKGVKGKDGLAGDVGFPGSKGEDGKVGISGDVGL
PGSPGLPGIAGMRGNPGLPGSAGHPGASGPLGAPGLIGTKGFPGLPGLHGLNGLPGTKGT
HGTPGPSITGVPGPAGLPGPKGEKGSPGIGIGAPGKPGVKGQRGGRGFPGFQGPAGLPGA
AGLSLPSVIGGQPGDPGRPGLDGERGRPGPPGPPGPPGPSSDQGDPGDPGFPGIPGRQGP
KGDQGIPGFSGLPGELGLKGMRGEPGFMGIPGKVGPPGDPGLPGMKGKAGPRGFSGPRGA
PGQTPIAEAVQVPPGPMGQPGMDGIPGLTGDPGVQGPVGLQGSKGLPGIPGKDGLNGLIG
PPGPLGDPGLPGLQGPPGLEGAPGKKGPFGTAGMPGQSSRVGYTLVKHSQSEQVPLCPIG
MSQLWVGYSLLFVEGQEKAHNQDLGFAGSCLPHFSTMPFIYCNINEVCHYAGRNDKSYWL
STTAPIPMMPVGQTQIPQYISRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLM
VRPCTAPFPQCRDGPQGALGGCLKLVLRLKWHEIETTEFEKKEHACVAGGARAPCHYFAN
KYSFWLTTVEERQQFREEPVXLKTGKLHTRVSRCQVCMKSL
NT seq
5166 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctgggttgtggctgctcctggttacgttgtgcctgaccgaagaactggcagga
gcgggagaaaaaaagtcctatggaaagccatgtggaggccaagactgcagtggaggctgt
aaatgctttcctgagaaaggagcgagagggcgaccaggaccaattggaattcaaggtcca
acaggtcctcaaggatttgctggccctagcggtttatcagggttgaaaggagaaaggggc
tccccaggtcccctgggaccatatggaccaaaaggagataagggtcccatgggagttcct
ggctttcttggcatcaatgggattccgggccacccgggacagccagggcccagaggccca
cctggcctggatggctgtaatggaactcaaggagatgttggatatccaggccctgatggc
tatcctgggcttctcggaccacccgggcttcctggccagaaaggctctaaaggtgaacct
gtccttgcccaaggtagtttcaaaggaataaagggggagcctggactgcctggactggac
ggaatcactggcccacaaggagcacccggatctccaggagctgtaggacccatgggacca
ccaggattgcaaggtcctccaggccctcccggtttccctggtcctgatgggaatatgggg
ttaggtttccaaggagagaaaggagtcaagggggatgttggcctcccaggccctgcggga
cccccaccatctactggagaactggaatttatgggatttcccaaagggaagaaaggatcc
aagggtgaaccagggcttccaggtttaccaggaataagtggccctccaggtctcccggga
tttggaactgctggagaaaagggtgaaaagggaatccctggtttgccaggacctaggggt
cccatgggtttagaaggactccgagggcccccagggagtcagggcaggaaagggtcttca
ggtttccctgggtttaacggatttccaggaattaagggcgaaaagggtggcattggcttg
ccaggcccagatgcttacatcgatacggatggtgctgtgatctcaggttaccctggagac
cccggtgtgccaggcctcccaggacttaaaggagatgaaggcattcagggcctgcctggc
ccttccggcctccctggcttgccagctttaccaggtgtcccaggtgccctagggcaccaa
ggagttccaggtctcaagggggacaaaggaaacccaggccgcaccacagttggggcagct
ggcccccctggcagaggtggtttgccaggcttaccaggcctagcaggcccacccggtcga
acatttgagactggaacactacagaacacagagccagggttccctggtctccgaggagaa
cgaggtccaaaaggaaacccaggcctcaaaggaataaaaggggactcagggttttgtgct
tgtgatggcggtgtccctaacattggaccacctggggagccaggcctgcctgggtcacaa
ggtctcattggccttccaggccttaaaggaaccagaggagatccaggctctgggggtaca
cagggcccatcagggactccaggtttatttggacctcggggtcctgcaggccacaaagga
gagaaaggggagccaagtctcagttcaagatcaaggatgccaggggagcggggtgatcct
ggcccccaggggctccctggtaaaacaggaaccccagggaaggatggagtaccaggttta
ccaggtctgccaggcctcccaggtgatggtggacagggattcccaggtgagaaggggtta
ccaggacttcctggtgaaaagggccgcagtggtccagctggtcccccaggaaatggactg
ccgggatctcccggacctcgtgggcttcctggagatcaaggaataaatggattaccaggg
aagcaaggcctccctgggcttccaggtgactgttgttgcagggagagcattggtaaagga
ggcttagacacagagggaggggtcaccttgccgtgtataattcccggatcatacggtcca
tcaggctttccaggagctcccggattcccaggtcctaaaggggcccgtggcctccctggg
attgcaggccagcctggattgcgtggaaataaaggaaaggctggaagtccaggattagtt
caccttcctgaactgccaggatttcctggacctcgtggggagaagggcttgcctgggttt
cctgggctccctggaaaagatggcttgcctgggaaaattggcagtccaggtttaccaggt
tccaagggagcctctggtgacatctatggtgctgaaaatggtgctccaggggagcaaggc
ctacagggattgccaggggaccgaggatttcctggagaccctggccttccaggacccaag
ggtctgcctgggaagtcaggcttgctgggccccaaaggtgaacggggcagtcctggaaca
ccaggccatgtgggacagccagggtccccagggcctgatggccgattcgacatcaagggc
aaacccgggctcccaggagcaccaggctttccaggcccttcaggacatcctggaaagaaa
ggtttaagaggcgagacaggtccccctgcatcagctggaaagagaggcctgcctgggttg
gaaggccttccaggatctccagggctgattggcttcttggggaactcaggcttgccaggg
agcactgggttgccaggcctgccgggtccgaagggtgagaagggatctgctgggctggta
ggttttccagggataccaggtctccctggtattcctggtgcaagtggattaaagggcatt
tctgggtcagccggaaaggtgggaccatctggacgggctggtagtgctggtaaaaaagga
gacagaggtgacccggggccagctggaatccccagtccacgacctccaatcctgaacctg
cagctgaaaggagacaaaggctctagaggctcagctggatctgacggatttcctgggccc
agaggtgacaaaggagagactggccccccagggctaccaggcttgcctggagttcccggc
ctccccagtatcatcaagggacttaatgggaaaccaggcccccctggctccattggatta
cggggcttacccggccttaaagggtcccctggaatcacaggtttcccaggaataccagga
gcaagtggttcacagggtctcaatggagctcccggactcccaggagcatctggtctccca
ggttcaaaaggagatcaaggccagacccttggaatttctggtagcctgggactcaaggga
caacctggggaatctgggtttaaaggtgtgaaaggaaaagatggactagctggtgatgtg
ggtttcccaggaagcaaaggtgaagatggcaaagttggtatttctggagatgttggcctt
cctggatccccaggactccctgggattgcaggcatgagaggaaatccagggctaccgggt
tctgcaggccatccaggggcctctgggcccctgggagcccccggcctaataggaaccaaa
ggtttccctggacttcctggtttacatggactgaatgggcttccaggaaccaagggaacc
catggaactccaggacccagtataaccggtgttcctgggccagctggcctgcctggtccc
aaaggggaaaaaggttctccaggaattggcatcggagccccagggaagccaggagtgaaa
ggacagagaggtggccgaggtttcccaggcttccagggacctgctggtctgcccggtgcc
gcaggcctctccttgccttcagtcataggaggacagcctggcgaccccgggcgaccaggc
ctagatggagagcgaggccgcccaggccctccagggcccccagggccccctgggccatcc
tctgatcaaggtgaccctggagaccctggcttccctggaattcctggccgtcaagggccc
aagggagaccaaggaattccaggtttctctggccttcctggagagctaggactgaaaggc
atgagaggtgagcctggcttcatggggattccaggcaaggttgggccacctggagaccca
ggacttcccgggatgaaggggaaggcagggccaagaggcttttccggaccccggggtgct
cctggacaaacaccaattgcagaagctgttcaggttcctcctggacccatgggtcaaccg
ggcatggatggcatccctggcctcacaggagaccctggggttcaaggccctgtaggccta
caaggctccaaaggattacctggcatccctggaaaagatggtctcaacggactcattggc
ccacctgggcctcttggtgatcctggtctccctggactgcaaggccctccaggactcgaa
ggagctccagggaagaagggtcccttcgggacggctggaatgcctgggcagagctcgaga
gtgggttacacgttggtgaagcacagccagtcggaacaggtgcccctgtgtcccatcggg
atgagccagctgtgggtgggttacagcttgctgttcgtggaggggcaggagaaagcccac
aaccaggacctgggatttgctggctcctgcctgccccacttcagtaccatgcctttcatc
tattgcaacatcaacgaagtgtgccactatgctgggcgcaatgataaatcctactggctg
tccaccaccgcccccattcccatgatgcccgtcggccagacccagattccccagtacatc
agccgctgttctgtgtgtgaggcaccctcacaagccattgctgtgcacagccaggacatc
accatcccgcagtgccccctgggctggcgcagcctctggattgggtactccttcctcatg
gtaaggccctgcactgccccctttccccagtgtagagatggaccgcagggagccctggga
gggtgcctcaagctggtcctcaggctcaagtggcatgagatagaaaccacagaatttgaa
aagaaggaacatgcttgtgtagcggggggggcgcgggccccctgccactactttgccaac
aagtacagtttctggctgacaacagtggaagagaggcagcagtttagggaggaacctgta
nntctgaagactgggaagctccatacaagggtcagccgctgccaggtgtgtatgaaaagc
ctgtag
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integrated database retrieval system
