Panthera tigris altaica (Amur tiger): 102951799
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Entry
102951799 CDS
T02988
Symbol
XAB2
Name
(RefSeq) XPA binding protein 2
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102951799 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptg03019
]
102951799 (XAB2)
03041 Spliceosome [BR:
ptg03041
]
102951799 (XAB2)
Messenger RNA biogenesis [BR:
ptg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102951799 (XAB2)
Spliceosome [BR:
ptg03041
]
Complex B
Other components
Prp19-related factors
102951799 (XAB2)
Complex C
102951799 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
Motif
Other DBs
NCBI-GeneID:
102951799
NCBI-ProteinID:
XP_015396814
LinkDB
All DBs
Position
Un
AA seq
573 aa
AA seq
DB search
MVVMARLSRPERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRITHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKVRLWGW
RDRAAASRGSQRRLTGTLAPRGVSPDRREAGKGSRWRFVFPPNNLPAPAACLVLRQVPGQ
RVTKTAPACTELLIAARSPASTRAGPRVPPASTFLLPRPCPQARDVYEEAIRTVMTVRDF
TQVFDSYAQFEESMIAAKMETASELGREEEGEAGLGRAPTVRPDSVLPTQIINTYTEAVQ
TVDPFKATGKPHTLWVAFAKFYEDNGQLDDVSALRVWVCACVSRGVCLARGPRRHRHTRG
GGGGLGPERQGATPCGSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGI
SLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKSEAAGPGRIGWC
GEVGSWASSQGTCPTLPLQSQFSEARLCRLRPP
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggcgcgtctttcccggccggagcggccggaccttgttttcgaggaagag
gacctcccctatgaggaggaaatcatgcggaaccagttctccgtcaaatgctggctccgc
tacattgagttcaagcagggtgccccgaagccaaggctcaatcagctgtacgagcgggcc
ctgaagctgctgccctgcagctacaaactctggtaccgatacctgaaggcgcgccgggca
caggtgaagcatcgctgcgtgaccgacccggcctacgaagatgtcaacaactgccacgag
agggcctttgtgttcatgcacaagatgccacggctgtggctagactattgccagttcctg
atggaccagggccgaatcacacacacccgccgcactttcgaccgcgctctccgggcactg
cccatcacgcagcactctcgcatctggcccctgtacctgcgcttcctgcgctcacaccca
ctacctgagacggccgtgcggggctaccggcgcttccttaaggtacgcctgtgggggtgg
cgggaccgagcggccgcttcacgaggttcccagcgccggcttactgggacactagcccct
cgaggcgtgtcacccgacagacgggaagcggggaaaggctctcgttggcgatttgttttc
cctccaaataatttgccagcacctgctgcatgtctcgtattgagacaagtgccgggacag
cgtgtgacaaagacagcccctgcctgcacagagcttttgattgcagccaggtcccctgcg
tccacgcgggcaggccctcgcgtccccccagccagcactttcctgttaccccgcccgtgc
ccacaggctcgagacgtgtacgaggaggccatccggactgtgatgaccgtgcgcgacttc
acccaggtgttcgacagctacgcgcagtttgaggagagcatgatcgcagccaagatggag
acggcctcagaactggggcgggaggaggaaggtgaggcaggcctgggccgggcccccact
gtccggcctgactccgtccttcccacccagatcatcaacacgtacacggaggccgtgcag
acggtggaccctttcaaggctacaggcaagccccacacactgtgggttgcgtttgccaag
ttttacgaggacaacgggcagctggacgacgtgagtgccctgcgtgtgtgggtttgcgcg
tgtgtgagtagaggcgtgtgcttggccagaggacccaggaggcacagacacacacgcggg
ggcgggggggggttggggccagagcggcagggggccacaccctgcggctccaccaaggcc
gtctacgaccgcatcctggatctgcgtatcgccacgccccagattgtcatcaactacgcc
atgttcttggaggagcacaagtacttcgaggagagcttcaaggcgtacgagcgtggcatc
tcgctgttcaagtggcccaacgtgtctgacatctggagcacctacctgaccaaattcatt
gcccgctacgggggccgcaagctggagcgggcgcgggacctcttcgaacaggcgctggac
ggctgccctcccaaatatgcgaagagtgaggcggccgggccgggcaggattggctggtgc
ggggaggtgggcagctgggcttccagccagggcacatgccccaccctcccgctgcagagc
cagttctcagaggcccgtctctgccgcctgaggcctccttga
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