Panthera tigris altaica (Amur tiger): 102953029
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Entry
102953029 CDS
T02988
Symbol
USHBP1
Name
(RefSeq) USH1 protein network component harmonin binding protein 1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
ptg
Panthera tigris altaica (Amur tiger)
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ptg03037
]
102953029 (USHBP1)
Cilium and associated proteins [BR:
ptg03037
]
Primary cilia and associated proteins
USH complex and associated proteins
102953029 (USHBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
NTR2
Motif
Other DBs
NCBI-GeneID:
102953029
NCBI-ProteinID:
XP_007088403
UniProt:
A0A8C9JMP1
LinkDB
All DBs
Position
Un
AA seq
703 aa
AA seq
DB search
MSSRAARPRSRRGRHAPPGELDPVAESSEEAEAAGGSSEPGPVPSQESCKPELLGPEAEA
RGQGLGGRPAKEAEENSNRGPAPSLKGPHGPAEEGHQATDVAPRPGELVPPRPGASDVFQ
ILQHALSSLEAAAAAWHRRPPSCPGPVEAEDRSEAGPKPCLEEEGAGACQREAARLAERN
AWLRLALGSRAEELIRVQASVQAIQAEKEMLQREVQELQDSLMKLEPFPLPSRGQAGGSG
SGSSSSGVDEEPWGTQDPFSLAHPLLRRLRSDSSTQMFGPLRTQPLAPEVRIMESQMERL
QGSIEKLKCFNHLLTAVLQGYKGRCEGLSMQLGQREAEATALRLALQYSEHCEEAYGVLL
TLREADSGAREEAPMRDLEVAEKEAQRLLAHEEAAMDGGTPRNPQPSPEGSSVDRPTPQE
LATQLWGYVQRLQERRALVKIPPEPGPTLAPMPTVPHAEAMVQAILGTQPGPVLPRLEKM
QIQRDLAATRETLAELMLRLQLMRREKRGLELKEAALRAQGPAHVLLLEQLRWEQAQLRT
GGANSSGGDSSGGGSSGDEEESSQGPPAVLGGSRGIDGGQVGKAQGPEILAQELAASLHR
ALSLREQLQSLREELEQVAQKGRARRAQSAELNNDLCKAHSALVLAFRGAHRKQEEQRRK
LEQQVALMEVRQAEELEMLEATVRALGRPRPSRPPPRLGETFL
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgagttcccgggccgcacgaccccgaagccggcgagggaggcacgctccacctggggag
ctggatcctgtggcagagagttcagaggaggccgaggcagccggcgggagttctgagccg
gggcctgtgccatctcaggagagctgcaagccagagctgctggggccagaggcagaagcc
aggggtcagggcttggggggcaggcccgccaaagaggctgaagagaactctaacagagga
ccggccccatctctcaagggaccccatgggcctgcagaggaaggccaccaggccacagat
gtagccccacggcccggggagctggtcccccccaggcctggagcctctgatgtgtttcag
attctccagcatgccctgagctcgctggaggctgctgctgcggcctggcaccgccggccc
ccaagctgtcctgggcctgtggaggcagaggacagaagtgaggcaggaccaaagccctgc
ctggaggaggagggggcaggggcttgccagagggaggcagcccgcctggcagagaggaat
gcctggctgcgattggccctgggcagccgagcagaggagctgattcgcgtgcaggcctcc
gtgcaggccatccaggctgaaaaggagatgttgcagagggaggtccaggagctccaggat
tccctgatgaagctggagccctttccacttccctcccgtggccaagcaggtggctcgggc
agtggctccagcagttctggggtagatgaagagccctgggggactcaggaccccttctcc
ctggctcaccccctgctccggcgcctccggagtgattccagcactcagatgtttgggcct
ctccgcactcaacccctcgcccccgaggtgcgcatcatggaaagccagatggaacggctc
caggggagcatcgagaagctcaagtgtttcaaccatctgctaacagccgtactgcagggg
tacaagggccggtgtgaaggcctcagcatgcagctgggccagcgggaggctgaagccaca
gcactgcgtctggccttgcagtacagtgagcactgtgaggaggcgtatggagtcctgctc
actctccgggaggcagattcgggagcaagagaggaagcccctatgagggacctggaggtg
gctgagaaggaggctcagaggctgctggcacacgaggaggctgccatggatggagggaca
ccacggaatccacagccaagccccgagggcagcagtgtggatcggcccacaccacaggag
ctggctacccagctctggggctatgtccagcgtctccaggagcgccgtgctctggtgaag
attcccccagagcctggcccaaccttggcacccatgcccaccgtgccccatgcggaggcc
atggtgcaggccattctggggacccagcctggcccagtcctaccccggttggagaagatg
cagatccagcgggacctggcggccacacgggagactctggcagaactgatgctgcggcta
cagttgatgaggcgggagaagcggggtctggagctgaaggaggctgccctccgggcccag
ggcccagcccatgtgctcctgctagagcagctgcggtgggaacaggcacagctccggacc
ggtggggccaacagtagtggtggggacagcagtggaggcgggagcagtggagacgaagag
gagtcgtctcagggccctccggctgttcttggtggcagcaggggcattgatggaggccag
gtgggcaaagcgcagggcccggagattctagcccaggaactagcagcgtcacttcaccgg
gccctgagcctgcgggagcagctgcagtctctgcgggaggaactggaacaggtggctcag
aaggggcgagccagacgtgctcagagtgccgagctgaacaacgatttatgcaaggctcac
agtgccctggtcctggccttccgaggtgcccaccggaagcaggaagagcaacggaggaag
ctggaacagcaggtggcactaatggaggttcgacaggcagaggaactggaaatgctagaa
gccaccgtaagggcgctggggaggcccagaccgtctcgtccacctccccggctgggagag
acctttctgtag
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