Panthera tigris altaica (Amur tiger): 102953202
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Entry
102953202 CDS
T02988
Symbol
ALYREF
Name
(RefSeq) Aly/REF export factor
KO
K12881
THO complex subunit 4
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg03013
Nucleocytoplasmic transport
ptg03015
mRNA surveillance pathway
ptg03040
Spliceosome
ptg05014
Amyotrophic lateral sclerosis
ptg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102953202 (ALYREF)
09122 Translation
03013 Nucleocytoplasmic transport
102953202 (ALYREF)
03015 mRNA surveillance pathway
102953202 (ALYREF)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102953202 (ALYREF)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102953202 (ALYREF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptg03019
]
102953202 (ALYREF)
03041 Spliceosome [BR:
ptg03041
]
102953202 (ALYREF)
Messenger RNA biogenesis [BR:
ptg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102953202 (ALYREF)
TREX complex
102953202 (ALYREF)
Spliceosome [BR:
ptg03041
]
Complex C
Other components
EJC/TREX
102953202 (ALYREF)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
102953202 (ALYREF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
102953202
NCBI-ProteinID:
XP_015391664
LinkDB
All DBs
Position
Un
AA seq
307 aa
AA seq
DB search
MPRLRNPEGRVLESRSRVWVRSCVFFPLQPKQLPDKWQHDLFDSGFGGGAGVETGGKLLV
SNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVP
LDGRPMNIQLVTSQIDTQRRPAQSVNRGGMTRNRGSGGFGGGGGTRRGARGGSRGRGRGP
ARARPWWCVWEAWARRTAIGQRLSTADQMDQATPSAQTRRRVALFLALGLHGSSVVRPEA
RNPAEAGAADSLSERRASHTPVAPWDPLWVCAPQEEDRFVLAFGELTVRCRKPTRETGMR
PDNPHRS
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggctgagaaatccagaggggagagtcctggagagccgctcacgggtctgggtc
cgttcttgtgttttctttccccttcagcccaaacaacttcctgacaagtggcaacacgac
cttttcgacagcggtttcgggggcggcgcaggcgtcgagacgggtgggaaactgctggtg
tcaaatctggattttggagtatcggacgctgatattcaggagctcttcgctgagttcgga
actctgaagaaggcggccgtacactacgatcgctcagggcgcagtttaggaacagctgat
gtgcactttgaacggaaggcagatgccctgaaggcgatgaagcagtacaacggcgtcccc
ctggatggccgccccatgaacattcagctcgtcacgtcacagattgacacacagcggaga
cccgcacagagcgtaaacagaggcgggatgaccagaaaccgcggttccggaggcttcggg
ggcggtggcggcacccggagaggcgctcgcggaggcagccggggcagggggagaggaccg
gcccgcgcccggccctggtggtgtgtctgggaggcctgggcacgccgaactgcgattggc
cagcgcctgtcaacagccgaccagatggatcaggccaccccctcggcccagacccgacgc
cgggtagccctcttcctggccctcggtctgcacggaagctcagtggtgcgtccagaagcg
cgaaaccccgcagaggccggggctgcggactccttgagcgagcgtcgcgcttcgcacacc
cctgtggcaccctgggacccgctgtgggtctgtgctcctcaagaagaggacaggtttgtt
cttgccttcggggagctgacggtccgatgcaggaaaccgacccgggagactggaatgcgg
cccgataaccctcataggagctag
DBGET
integrated database retrieval system