KEGG   Panthera tigris altaica (Amur tiger): 102953827
Entry
102953827         CDS       T02988                                 
Symbol
COPA
Name
(RefSeq) coatomer protein complex subunit alpha
  KO
K05236  coatomer subunit alpha
Organism
ptg  Panthera tigris altaica (Amur tiger)
Brite
KEGG Orthology (KO) [BR:ptg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ptg04131]
    102953827 (COPA)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ptg04147]
    102953827 (COPA)
Membrane trafficking [BR:ptg04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    102953827 (COPA)
Exosome [BR:ptg04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   102953827 (COPA)
  Exosomal proteins of bladder cancer cells
   102953827 (COPA)
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 Beta-prop_EML_2 TPR_COPA_B Beta-prop_WDR36-Utp21_1st WD40_Gbeta EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR75_1st WD40_RFWD3 WD40_MABP1-WDR62_1st ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 102953827
NCBI-ProteinID: XP_007092432
UniProt: A0A8C9JYE9
LinkDB
Position
Un
AA seq 1224 aa
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDAESITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLEALCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDP
EKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIAGKGKGGALAADIDIDTV
GTEGWGEDAELQLDEDGFVEATDGLGDDALGRGQEEGGGWDVEEDLELPPELDVPPGAAG
GADDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVTQFGPYKQLFL
QTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLRLNDLIQRLQLCYQLTTVG
KFEEAVEKFRAILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMEIERKKLPKETLEQ
QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQ
TRKILSACEKNPTDACQLSYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQV
CKVTTVTEIGKDVIGLRISPLQFR
NT seq 3675 nt   +upstreamnt  +downstreamnt
atgctgaccaaattcgagaccaagagcgcgcgggtcaaagggctcagttttcaccccaaa
agaccttggatcctgaccagtttacacaatggggtcatccagttatgggactatcggatg
tgtacccttattgacaagtttgatgaacatgatggtccagtacgaggcatcgacttccat
aagcagcagccgctgtttgtctctggaggagacgactataagattaaggtgtggaattac
aagcttcggcgctgtctcttcacattgcttgggcatttagactacatccgcaccacgttt
tttcatcacgaatatccttggattctgagtgcctcagatgatcagaccatccgagtgtgg
aactggcagtctagaacctgtgtctgtgtgttaacagggcacaaccattatgtaatgtgt
gctcagtttcacccctcagaagacctggttgtgtcggccagcctggaccagactgtgcgt
gtttgggatatttccggtctgaggaagaagaacttgtcccctggcgcagtggagtccgac
gtgagaggaatcaccggggttgatctgtttggaactacggatgcggtggtgaagcacgtg
ctggagggtcatgatcgcggagtaaactgggctgccttccaccccaccatgccccttatt
gtatctggggcagatgaccgccaggtgaaaatctggcgcatgaatgagtcaaaggcgtgg
gaggttgacacctgtcgtggtcattacaacaacgtgtcttgtgccgtcttccaccctcgc
caagagctgatcctcagcaattctgaggacaagagcatccgcgtctgggatatgtccaag
aggactggggttcagaccttccgcagggaccacgatcgtttctgggtcctggccgcccac
cccaacctgaacctctttgcggcaggccatgatggtggcatgattgtgtttaaactggaa
cgggaaaggccagcctacgctgttcacggcaatatgctacattacgtcaaggaccgattc
ttacgtcagttggatttcaacagctccaaagacgtagcggtgatgcagctgcggagtggt
tccaagttcccggtgttcaatatgtcgtacaatccagcagaaaatgcagtcctgttgtgt
acgagagccagcaacttggagaatagcacctatgacctgtacaccatccccaaggacgcg
gattcccagaatcccgacgctcccgaagggaaacgatcctcaggcctgacggccgtttgg
gttgctcgaaaccggtttgctgtcctggatcggatgcattcgcttctgatcaagaatctg
aagaatgagatcaccaaaaaggtacaggtgcccaactgcgatgagatcttttatgctggc
acaggaaacctcctgctccgagatgcagaatccatcacgctctttgacgtacaacagaag
cggactctggcatctgtgaagatttccaaggtgaaatacgttatctggtcagcagacatg
tcccatgtagcactactggccaagcatgccatcgtgatctgtaaccgcaaactggaggct
ctgtgtaacattcacgagaacattcgcgtcaagagtggggcctgggatgagagtggggta
tttatctataccacaagcaaccacatcaaatatgccgtcaccactggggactacgggatc
atccgaactctggatttacccatctatgtcacgcgggtgaagggcaacaatgtgtattgc
ctggatagggagtgtcgtcctcgggtgctcaccattgatcccacggagttcaagttcaag
ctggccctgatcaacagaaaatatgatgaggtgctgcacatggtgagaaatgcgaaacta
gttggccagtctatcatcgcttacctccagaagaagggctaccctgaggtggccttgcat
ttcgtcaaggacgagaaaactcgctttagcctggcactggagtgtgggaacatcgagatt
gctctggaagcagccaaagcactggatgacaagaactgctgggaaaagctgggagaagtg
gccttgctacaggggaaccaccagattgtggaaatgtgttatcaacgcaccaaaaacttc
gacaaactttctttcttgtaccttatcactggcaacctggagaaacttcgcaagatgatg
aagattgctgagatccgaaaggacatgagtggccattatcagaatgcactctacctgggt
gacgtgtctgagcgggtgcggatcctgaagaactgtgggcagaagtccctggcctatctc
acagctgctactcatggcttagatgaagaagccgagagcctgaaggagacatttgaccca
gagaaggagacaatcccagacattgaccctaatgccaagctgctccagccgcctgcacct
atcatgccattggataccaattggccgttactgactgtatccaaaggcttctttgaaggc
tccattgccggcaagggcaagggaggagccctggctgctgatattgacattgacaccgtt
ggtaccgaaggctggggagaggatgcggagctgcagctggatgaagatgggtttgtggag
gctacggatggcctgggggatgacgctcttggcaggggacaggaagaaggaggcggctgg
gatgtggaagaggacctggagctccctcctgagctggatgtaccccctggggcagccggg
ggtgctgacgacgggttctttgtgcctcccaccaagggaaccagcccaactcagatctgg
tgcaataactctcagcttccagtcgatcacatcctggcaggctcttttgaaacagccatg
cggctccttcacgaccaggtgggggtgacccagtttggtccctacaagcaactgttccta
cagacctacgcccgaggccgcaccacctatcaggctctgccctgcctgccctccatgtat
ggctaccctaatcgcaattggaaggatgcggggctgaagaatggcgtgccagccgtgggc
ctgaggctcaatgacctcattcagcggctacagctatgctaccagctcaccacagttggc
aagttcgaggaggccgtggagaaattccgtgccattttactcagtgtgcccctcctcgtc
gtggacaataagcaggagattgcggaggcccagcagcttatcaccatttgccgtgagtac
atcgtgggcctgtccatggagatagaaagaaagaagctgcccaaagagactctggaacag
cagaagcgcatctgcgagatggcagcctatttcacccactccaacctgcagcctgtgcac
atgatcctggtgctgcgcacggccctcaacctcttcttcaagctcaagaactttaagacg
gctgccacctttgctcggcgcctgttggaacttgggcccaagccagaggtggctcaacag
acccgcaaaattctgtctgcgtgtgagaagaaccccacagacgcctgccagctcagctac
gacatgcacaacccctttgacatctgtgctgcgtcttaccggcccatctaccgtgggaag
ccagtggagaaatgtccactcagtggggcctgctattcccctgagttcaagggtcaagtc
tgcaaggtcactacagtgacagagattggcaaagatgtcatcggtttaaggatcagtcct
ctgcagttccgctga

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