Panthera tigris altaica (Amur tiger): 102954115
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Entry
102954115 CDS
T02988
Symbol
LSM6
Name
(RefSeq) LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg03018
RNA degradation
ptg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102954115 (LSM6)
09123 Folding, sorting and degradation
03018 RNA degradation
102954115 (LSM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptg03019
]
102954115 (LSM6)
03041 Spliceosome [BR:
ptg03041
]
102954115 (LSM6)
Messenger RNA biogenesis [BR:
ptg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102954115 (LSM6)
mRNA degradation factors
5'-3' decay
Lsm complex
102954115 (LSM6)
Spliceosome [BR:
ptg03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
102954115 (LSM6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
102954115
NCBI-ProteinID:
XP_007091822
UniProt:
A0A8C9KZ49
LinkDB
All DBs
Position
Un
AA seq
80 aa
AA seq
DB search
MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKY
GDAFIRGNNVLYISTQKRRM
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgagtctacggaaacaaaccccgagtgacttcttaaagcaaatcattggacgaccggtt
gtggtaaaattgaattctggagtggattatcgaggggtcctggcttgcctggatggctac
atgaatatagccttggagcagacggaagaatatgtaaatggacagctgaagaataagtac
ggggatgcatttatccgtggaaacaatgtattgtatataagtacacagaagagaaggatg
tga
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integrated database retrieval system
