Panthera tigris altaica (Amur tiger): 102954335
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Entry
102954335 CDS
T02988
Symbol
MBD4
Name
(RefSeq) methyl-CpG binding domain 4, DNA glycosylase
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102954335 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptg03036
]
102954335 (MBD4)
03400 DNA repair and recombination proteins [BR:
ptg03400
]
102954335 (MBD4)
Chromosome and associated proteins [BR:
ptg03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
102954335 (MBD4)
DNA repair and recombination proteins [BR:
ptg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
102954335 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
102954335
NCBI-ProteinID:
XP_015400620
LinkDB
All DBs
Position
Un
AA seq
413 aa
AA seq
DB search
MQNERSNSNWNLRTRSWWRKGVFPLPSGTLESQNSRGPSNFKEDEGVNDVDSRKVRKSKR
KVTILKGIQIKKTKTGCQKGLPESTQSNRKRESEYNKADAESEPVEQRSQLDKTFSISDA
GASNKTLSVTNEEKRIVKEKSLSSGSNFCFEQITPGIINKLCSTEEAEHSKKCEETFLES
EEIRTKVEAGERKEHLHADILKCGSEMDDNCSQTEKDSISVKICQGIQSAEAAEDTIPRT
QIEKRKTSLYFSSKYNKEALSPPRRKAFKKWTPPRSPFNLVQETLFHDPWKLLIATIFLN
RTSGKMAIPVLWEFLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIIKFSDEYLTKQ
WRYPIELHGIGKYGNDSYRIFCVNEWKQVHPEDHKLNKYHDWLWENHEKLSLS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatgaaaggagcaattcaaactggaacctcaggacacgaagctggtggagaaaa
ggtgtctttcccctgccaagtggtactttggaatcgcaaaatagcagaggaccatctaat
tttaaagaagatgagggtgttaatgatgttgactccagaaaggttagaaagtccaaacga
aaggtgactattttaaaaggaattcaaattaagaaaactaaaacagggtgccagaagggt
cttcccgagtctactcaaagtaataggaaaagagaatctgaatataataaggcagatgct
gaaagtgaacctgttgagcaaagaagtcagcttgataaaactttctccatttctgatgct
ggagcaagcaacaagaccctcagtgtaaccaatgaagaaaagagaattgtaaaagaaaaa
tcactgagttcaggatcaaacttttgttttgaacaaataactcctggcatcataaacaaa
ttatgttcaaccgaagaagcagaacacagcaagaagtgtgaggaaacctttttagaatct
gaggaaataagaacaaaagtagaagctggggaaaggaaggaacatttgcatgctgacatt
ttaaaatgtggctctgaaatggatgacaactgctcacaaacggagaaagactctatttct
gtgaaaatatgtcaaggtattcagagcgctgaagcagctgaagataccattccacggaca
caaatagaaaaaaggaaaacaagcctatatttttccagcaaatataacaaagaagccctt
agccccccacgacgcaaagcgtttaagaagtggacacctcctcggtcaccttttaacctc
gtccaagaaacacttttccatgatccatggaagctcctcatcgctactatatttctcaat
cggacctcaggtaaaatggcaatccctgtgctctgggagtttctagagaagtacccttcc
gctgaggtagcaagaaccgcagactggagagatgtgtcagaacttcttaaacctcttggt
ctctatgatcttcgagcaaaaaccattatcaagttctcagatgaatatctgacaaagcag
tggaggtacccaattgagcttcacgggattggcaaatatggcaatgactcttaccgaatt
ttttgcgtcaatgagtggaagcaggtgcaccctgaagaccataagttaaacaaatatcat
gactggctttgggaaaatcatgaaaaattaagtctgtcttaa
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