KEGG   Panthera tigris altaica (Amur tiger): 102954873
Entry
102954873         CDS       T02988                                 
Symbol
SYVN1
Name
(RefSeq) synoviolin 1
  KO
K10601  E3 ubiquitin-protein ligase synoviolin [EC:2.3.2.27]
Organism
ptg  Panthera tigris altaica (Amur tiger)
Pathway
ptg04120  Ubiquitin mediated proteolysis
ptg04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ptg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    102954873 (SYVN1)
   04120 Ubiquitin mediated proteolysis
    102954873 (SYVN1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ptg04121]
    102954873 (SYVN1)
Enzymes [BR:ptg01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102954873 (SYVN1)
Ubiquitin system [BR:ptg04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    102954873 (SYVN1)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4 zf-rbx1 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_16 zf-RING_11 zf-RING_5 zf-RING-like zf-ANAPC11 zf-HC5HC2H Endonuclease_7 Prok-RING_4
Other DBs
NCBI-GeneID: 102954873
NCBI-ProteinID: XP_015397435
LinkDB
Position
Un
AA seq 536 aa
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQATDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPTQSPPPPEPADQGPPPAPHPP
PLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAAAPPPTCAALSRPRGCR
GARSTLQGSPSAESSQSCQHVQASPPSFFSPRPPRPAASVSPTEETPGVVTAATPTSVPS
SEATTPSPGDSPPAPEPDKPPAPESVGTEELPEDGEPDAAELRRRRLQKLESPVAH
NT seq 1611 nt   +upstreamnt  +downstreamnt
atgttccgcaccgcagtgatgatggcggccagcctggcgctgaccggggccgtcgtggct
catgcctactacctcaagcaccagttctaccccaccgtggtgtacctgaccaagtccagc
cccagcatggcagtcctctacatccaggcctttgtccttgtctttctcttgggcaaagtg
atgggcaaggtgttctttggacagctgagggcagcagagatggagcaccttctggaacgt
tcctggtatgccgtcactgagacttgtctggccttcacggtctttcgggacgacttcagc
ccccgctttgtcgcactcttcactctccttctcttcctcaagtgtttccactggctggct
gaggaccgtgtggactttatggaacgcagccccaatatctcctggctctttcactgccgc
atcgtctcccttatgttcctcctgggtatcctggacttcctcttcgtcagccatgcctat
cacagcatcctgacccgtggggcctctgtgcagctggtgtttggctttgagtatgccatc
ctgatgactatggtgctgaccatcttcatcaagtacgtactgcactccgtggacctccag
agcgagaacccctgggacaataaggccgtgtacatgctctacacggagctgtttacaggc
ttcatcaaggttttgctgtacatggctttcatgactatcatgatcaaggtgcacaccttc
cctctctttgccatccggcctatgtacctggccatgaggcagttcaagaaggccgtgaca
gacgccatcatgtctcgccgagccatccgcaacatgaacacgctgtatccagatgccacc
ccggaggagctccaggcaacggacaacgtctgcatcatctgccgagaagagatggtgacc
ggcgccaagagactgccctgcaaccacattttccataccagctgcctgcgctcctggttc
cagcggcagcagacctgccctacctgccgtatggacgtccttcgggcatcactgccgacc
cagtcaccaccgccccctgaacctgcggatcaggggccaccacctgcccctcatccccca
ccactcctgccccagccccctaacttcccccagggcctcctgcctccctttcctccaggc
atgttcccgctgtggccccccatgggcccctttccacccgtcccgcctccccccagctca
ggagaggctgcggcccctccacccacttgtgcagccctttctcggcccagaggctgcaga
ggtgcgcgctccaccctgcaaggctcaccaagcgcagaatcttctcaatcgtgccagcat
gtccaggcctcccctccctcgtttttctctcctaggcccccccggcctgccgcctcagtc
agccccactgaggagacccctggagtcgtcactgctgccacccccaccagcgtccccagc
tcggaggccaccaccccatccccaggagactccccaccggcccctgaacctgacaagcct
ccagctcccgagtccgtgggcacggaggagctgcctgaggacggggagcctgacgccgca
gagctccgccgccgccgcctgcagaagttggagtcccctgttgcccactga

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