Panthera tigris altaica (Amur tiger): 102954917
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Entry
102954917 CDS
T02988
Symbol
PCDHA12
Name
(RefSeq) protocadherin alpha-12
KO
K16493
protocadherin alpha
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
102954917 (PCDHA12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptg03036
]
102954917 (PCDHA12)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ptg04515
]
102954917 (PCDHA12)
Chromosome and associated proteins [BR:
ptg03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
102954917 (PCDHA12)
Cell adhesion molecules [BR:
ptg04515
]
Cadherins
Protocadherins
102954917 (PCDHA12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_FAT4_N
Ig_Cad99C_N
Cadherin_C_2
Ig_CLSTN
Ig_BT4661_3rd
Motif
Other DBs
NCBI-GeneID:
102954917
NCBI-ProteinID:
XP_015391127
LinkDB
All DBs
Position
Un
AA seq
641 aa
AA seq
DB search
MSLYTQKVEKENFVSRSASNHWQNRIDSILTGTLGKFYQTYTYGKEDCSQRFPGEQSLKT
NSPISEISLTTMVFSWRGGPGARRLLLALLLLAAGKSGSGQVHYSVQEEAKHGTFVGRIA
QDLGLELAELVPRFFRVASKGRRDLLEVNLQNGILFVNSRIDREELCGRSTECSIHLEVI
VDRPLQVFHVEVEVKDINDNPPVFREVEQKVLISESAPLDSHFPLEGASDADIGVNSLLT
YRLGTNEYFTLKLITKNDKSILPELVLRKSLDREETPELNILLTSQDGGKPELTGSVQIK
ISILDVNDNAPEFDKPGYRVVLFENVPNGTRVIQLNASDLDEGVNREISYAIRLILPVSE
KCMFSINAETGEIRIYGILDFEENNEYEIQVNAIDKGIPSMAGHCTVLVEVLDLNDNTPE
VMITSLSPPVREDVQVGTVIALISVSDRDSGANGQVTCSLTPHVPFKLVSTFKNYYSLVL
DSALDRESVADYALVVTARDGGSPSLSATASVSVEVADVNDNAPTFAQAEYTVFAAGAEA
ALVDVNVYLIIAICAVSSLLVLTLLLYVALRCSAPPSEGACGPGKPTLVCSSAVGSWSYS
QQRRQRVCSGEGPPKTDLMAFSPSLPQSGEDCLNSSSEVSH
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgtacactcagaaggtggaaaaggaaaactttgtctcgcgttcagcttccaac
cactggcagaataggatcgactccatattgaccggaacgctgggtaaattttatcaaacc
tatacctacggaaaggaagactgctcacaaaggttcccaggcgagcaatcccttaaaact
aacagtcccatctcagagatctcgttaactacaatggtgttttcctggagaggaggccca
ggagcccggcgattgctcctggcgcttctgctccttgcagctgggaaatctgggagcggc
caggtccactactcggtccaggaggaggccaaacacggcactttcgtgggccgcatcgcg
caagacctggggctggaactagcggagctcgtaccgcgctttttccgtgtggcgtccaaa
ggccgccgagaccttctggaggtaaatctgcagaatggcattttgtttgtgaattctcgg
atcgaccgagaggagctctgtgggaggagtaccgagtgtagcatccacctggaggtgatc
gtggacaggccgctgcaggttttccatgtggaggtggaggtgaaagacattaatgataac
ccgccggtgttcagagaagtagaacaaaaggtacttatctctgaatctgcacctctggat
tctcattttcctctagagggcgcttccgatgcggacatcggcgtaaactctcttctgacc
tataggttaggtacaaatgagtattttactcttaaattaataacgaaaaacgataaaagt
atattgcctgaactagttctacggaagtcattggatagagaggagacgccagaacttaat
atattgctgacctcccaggatggcggtaaacccgagctaacaggatctgttcagattaaa
ataagcatcctggatgtgaatgacaacgctccggagtttgataagcctggctatagagta
gtgctgtttgaaaatgtcccaaacggcacgagagtgattcaattaaatgcttctgatcta
gacgaaggggtcaatagagaaatttcctatgcaatcagactgattttgccagtgagtgag
aaatgcatgttttcaataaatgcagaaacaggtgaaatcagaatttatgggatattggat
tttgaagagaataatgagtatgaaattcaggttaacgccattgataaagggattccttcc
atggcaggtcactgcacagtcctagtggaagttctggacctgaatgacaatacccctgag
gtaatgattacttcgttgtctcccccggtgagagaggatgttcaggtgggcactgtcatc
gccttgatcagcgtgtccgaccgtgactctggcgccaacgggcaggtgacctgctcacta
acaccccatgtccccttcaagctggtgtccaccttcaagaattactattcgctggtgctg
gacagcgccctggaccgcgagagcgtggcggactatgctctagtagtgacagcacgggac
gggggctcgccttcgctgtcggccacggccagcgtgtccgtggaagtggccgacgtgaac
gacaacgcgccgacattcgcgcaggccgagtacacggtgttcgccgccggcgcggaggcg
gcgctggtggatgtcaacgtgtacctgatcatcgccatctgcgcggtgtccagcctgctg
gtgctcacgctgctgctgtacgtggcgctgcggtgctcggcgccgcccagcgagggcgcg
tgcgggccggggaagcccacgctggtgtgttccagcgcggtggggagctggtcgtactcg
cagcagaggcggcagagggtgtgctctggggagggtccgcccaagaccgacctcatggcc
ttcagccccagccttccacagtcgggagaagattgtttaaattcttccagtgaagtaagt
cattga
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integrated database retrieval system
