Panthera tigris altaica (Amur tiger): 102954928
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Entry
102954928 CDS
T02988
Symbol
ERCC6
Name
(RefSeq) ERCC excision repair 6, chromatin remodeling factor
KO
K10841
DNA excision repair protein ERCC-6
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
102954928 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptg03036
]
102954928 (ERCC6)
03400 DNA repair and recombination proteins [BR:
ptg03400
]
102954928 (ERCC6)
Chromosome and associated proteins [BR:
ptg03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
102954928 (ERCC6)
DNA repair and recombination proteins [BR:
ptg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
102954928 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
102954928
NCBI-ProteinID:
XP_007080089
LinkDB
All DBs
Position
Un
AA seq
1490 aa
AA seq
DB search
MQNARIPHSSQAQEQDCLQSQCVSDKQEMTIKRENDGNAEVEESLPSCSSASGPSTSAEG
CSSEVLRRGPALLHIDRHQIQTVELSAQALELQGLGVDVYDQDVLEQGVLRQVDSAIHEA
SRVAQLADAEKEYRSVLDDLTSCRTSLRQINKIIEQLSPQAATNRDVNRKLDSVKRQKYN
KEQQLKKITAKQKRLQAILGGAEVQVEIDHAGLEEEDTEPGPSCLGSMLMPVQEAAWEEL
IRTGQMTPFGTQIPQKQEKKPRKLMLDEASGFEKYLADQAKLSFERKKQACNKRAARKTA
ASGTSELSATLSANKPSERSKVLSKADKRLRKHIKKLQKRALHFQGKVGLPKGKKPLESD
VRPKAEGTSESEESEYFPTEEEQEEAEGAELTGEGPDSVLKPVLKHRKRQKKVTVQEMGD
DFFPSSGEEAEATCGGGGRKVVRCRDDGDEDYYKQRLRRWNKLRLRDKEKCLKLEGDSEE
SDAEFDDFKIPGFLFRKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGL
SYSKIRTRGSNYRFKGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEK
LIRDIAHCHGILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPH
RIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYK
CACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTEEQLKVYQNFIDSKEVYRIL
NGDMQIFSGLVALRKICNHPDLFSGGPKNLRGIPDDELEEDQFGYWKRSGKMIVVESLLK
IWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQPLITRYNEDTSIFV
FLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIE
EKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLTSPDASQSTETSAIFAGTGSDV
QTPKRLLKRKLLPAFGTDPNVSMCKKCPDSNASANDATSSEEKSTATGAEVNAVTSDQVT
SDPLKDAPRTPRDLTGGDGPGEETSAVSRPEESSVISGHGECSDSPGISKMDGLSSEESI
HEKQGLSDKRESCQAPTDPLRENKQTENNFYKHKSKTKHSAPEEETLEHHRRLKQKPKDS
KHRRDAKFEGTRIPHLVKKRRYQKQDSENENETSQQSNDDYVLEKLFKKSVGVHSVMKHD
AIIDGANPDYVLVEAEANRVAQDALKALRLSRQRCLGAVSGVPTWTGHRGVSXXXXXXXX
XXXIKSRFGQKRNSNFSLQHPSSTSSKEKCQDGVTRKDGKDNACEHFSGKVEDAESSPGA
LPSSSLLAKMRARNHLILPERLESDSAHQEASAPPSATTEHDDLLVEMRNFIAFQARVDG
QASTREILQEFECKLSASQSCVFRELLRNLCTFHRTSSGEGIWKLKPEYC
NT seq
4473 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatgcaagaatcccccactcaagccaagctcaggagcaagactgtttacaaagt
cagtgtgtcagtgataaacaagaaatgacaatcaaacgagaaaatgacggcaatgcagag
gtggaggaaagcctcccctcttgttcctctgccagcggaccatccacttctgccgagggc
tgttcatcagaagttctgaggagagggccagccctgctgcacatcgacagacatcagata
cagacggtggagctgagtgcgcaggctcttgaactgcaggggttgggtgtggatgtatat
gaccaggacgtgctggaacagggtgtgcttcggcaggtggacagcgccattcatgaggcc
agccgtgtggcccaacttgctgatgcagagaaagagtatcgctcagtcctggatgacctc
acgtcatgtaggacatccctaaggcaaatcaataaaattattgaacaacttagccctcaa
gctgccaccaacagagacgtcaacaggaaactagattctgtaaaacgacagaagtataat
aaggaacaacagttaaagaagatcacggcaaaacaaaaacgtctccaggccatccttgga
ggagcagaggtacaagttgaaatagatcatgctggtctggaggaagaggatacagaaccg
gggccatcctgtctcggcagcatgctcatgcctgtccaggaggctgcttgggaagagctc
atccgcactggccagatgacaccttttggaacccagatccctcagaaacaggagaaaaag
cctagaaaactaatgctcgatgaagcatcaggctttgaaaagtatttggcagatcaagca
aaattgtcttttgaaaggaagaagcaagcttgtaataaaagagcagctaggaaaactgcg
gcctcgggcacctctgagctgagtgcaacactcagtgcaaacaaaccaagtgagcgaagc
aaagttctctcgaaagcagataagcgcttgagaaagcacatcaagaagctgcagaaaagg
gctcttcatttccaagggaaagtgggcttgccgaaaggaaagaagcctttggagtctgac
gtgaggccgaaggcagagggcacctctgagagcgaagagtccgaatacttccccacggag
gaggagcaggaggaggcagagggggctgagctgaccggagaaggccctgactccgtgctg
aaacccgtgctcaagcaccggaagcggcagaaaaaagtcacggtgcaggagatgggggat
gacttttttccaagttctggggaagaagcagaagccacctgtggaggaggaggtcggaaa
gtagtgagatgccgagatgatggagatgaagattattataagcagcggctaaggagatgg
aataagctgaggctgcgggacaaagagaagtgcctgaagcttgaaggcgattctgaggag
agcgatgccgagtttgacgattttaaaatcccaggttttctgttcagaaagctttttaag
taccagcagacaggtgttaggtggctgtgggaattgcactgccagcaggcaggaggaatt
ctgggagatgaaatgggattgggcaagaccatccagataattgccttcttggcaggtctg
agctacagcaagatcaggactcgtggttcaaattacaggttcaaggggttgggtccgact
ataattgtctgtccaacgacagtgatgcatcagtgggtgaaggaatttcacacgtggtgg
cctccgttcagagtggcaattctgcatgaaactggctcctacactcacaaaaaggagaaa
ctaattcgagatattgctcattgtcatggcattttgatcacttcttactcctacattcgg
ctgatgcaagatgacattagcaggcatgactggcactatgtgatattggatgaggggcac
aaaattcgaaatccaaatgctgctgtcacccttgcttgcaaacagttccgcacccctcat
cgcatcatcttgtctggctcaccgatgcaaaataacctccgggagctgtggtcgctcttt
gacttcatcttcccaggaaagttaggcacgttgcctgtgttcatggagcagttctcggtt
cctatcaccatggggggatattcaaatgcctccccagtacaggttaaaactgcttataaa
tgtgcatgtgtcttacgagataccataaatccatacctactgcggagaatgaagtcagat
gtcaaaatgagcctttctttgccagataaaaatgaacaggtcctattttgccgtcttaca
gaggagcaacttaaagtctaccaaaattttattgattccaaagaagtttacagaattctt
aatggagatatgcagattttctctggacttgtagccctaagaaaaatctgcaaccaccct
gatctcttttctggaggccccaagaatctcagaggtattccagatgatgaactagaagaa
gatcagtttggatactggaaacgttctgggaaaatgatagtagttgagtccttgttgaaa
atatggcacaaacaaggtcaacgagtattgctcttttcgcagtcaagacaaatgttggac
atacttgaagtattccttagagcccaaaagtattcttacctcaagatggatggtaccact
gcaatagcttcaagacaaccactgattacaagatacaacgaggacacatctatatttgtg
tttcttctgaccactcgggtgggtggcataggagtcaacctgacgggggcaaacagagtc
atcatctatgatcccgactggaacccaagtacagacacacaggcccgggagcgagcctgg
aggatcggccagaagaagcaagtgacggtgtacaggctgctgactgcaggcaccatcgaa
gaaaagatttaccaccgacaaattttcaagcagtttttgacaaatagagtgctgaaagat
ccgaagcaaaggcgatttttcaagtccaacgatctttatgagctgttcactctgacaagc
cccgatgcatcccagagcactgaaacaagtgctatttttgcaggaactggttcagatgtt
cagactcccaaacgccttttaaaaagaaaacttctgccagcctttggaacagaccctaat
gtttcaatgtgcaaaaagtgccctgattctaatgcatctgcaaatgatgccacatcatct
gaagagaagtctacagcaacaggagctgaagtaaatgcagtaacatctgatcaagtaaca
tctgatcctttgaaagatgcccctcgaacgcctagagatctgactggtggtgatgggcct
ggagaagagacgagtgcagtgtctagaccagaggagtcatcagtgattagtggacatggg
gaatgttcagattctccaggaatcagcaaaatggatggactgtctagtgaagaaagcatc
catgaaaaacaaggtctttctgacaaaagagaaagctgccaggctccaacagaccctctt
cgggagaataagcaaacggaaaataatttttataagcacaaatctaaaacaaaacatagt
gcaccagaagaagagaccctggagcaccatcgcaggctgaagcaaaagcctaaggactct
aagcatcgcagagatgccaagtttgaaggaacccgaattccgcacctagtgaagaaaagg
cggtaccagaagcaagacagtgaaaatgagaatgagaccagccagcagagcaatgacgat
tatgtcttggaaaagcttttcaaaaagtcagttggtgtgcacagtgtcatgaaacacgat
gccatcatagatggggccaatccagattatgtgctggtggaggcagaggccaaccgagtg
gcccaggatgccctgaaagcgctgaggctctctcgtcaacggtgtctgggagcagtgtcc
ggtgttcccacctggacaggccatcggggggtttctgnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnaataaagagtagatttggtcagaaaaggaattccaacttctctctgcagcat
ccttcttcaacatcttcaaaggagaaatgccaggacggcgtcacgagaaaggatggaaag
gataatgcttgtgagcacttcagtggaaaagtggaagatgcagagtcttcacccggggcc
ctcccttcgtcttcactgttggctaaaatgagagctaggaaccacctgattctgccagag
cgactggaaagtgacagtgcgcaccaagaggcatctgctccgccatctgccaccacggaa
cacgatgatctgctggtggaaatgagaaacttcattgcttttcaggcccgtgttgatggc
caggccagcactcgggagatcctgcaggagttcgagtgcaagttatcagcctcacagtct
tgtgtctttcgagaactattgagaaatctgtgcacttttcataggacttctagtggtgaa
ggaatttggaaactcaagccagaatactgctga
DBGET
integrated database retrieval system
