Panthera tigris altaica (Amur tiger): 102955095
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Entry
102955095 CDS
T02988
Symbol
SCAF8
Name
(RefSeq) SR-related CTD associated factor 8
KO
K13191
RNA-binding protein 16
Organism
ptg
Panthera tigris altaica (Amur tiger)
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptg03021
]
102955095 (SCAF8)
03041 Spliceosome [BR:
ptg03041
]
102955095 (SCAF8)
Transcription machinery [BR:
ptg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102955095 (SCAF8)
Spliceosome [BR:
ptg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
102955095 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
102955095
NCBI-ProteinID:
XP_007097277
LinkDB
All DBs
Position
Un
AA seq
1266 aa
AA seq
DB search
MDTRSILYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLY
VIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFK
SEIIQPLLDMAAGIPPPVVTPVLASTTAAMSNTPGTPVTPVTPANVVQGLPDPWVSQITN
TDTLAAVAQILQSPQGQQLQQLIQTLQLQQQKPQPSILQALDAGLVVQLQALTAQLTAAA
AAANTLNPLEQGVSFNKKLMDRFDFGEDSEHSEEPKKEISASQLSHVSESVNNSIFHQIA
EQLQQQNLEHLRQQLLEQQQPQKATPQDSQEGTFGSEHSASPSQGSSQQHFLEPEANLDD
SIDIQQQDMDIDEGQDGVEEEIFEQEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRSGSRK
RKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLWVGQV
DKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFRALQKLSSGSYKIGSKVI
KIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVDDLEGFAEGGMIDQETVNTEWETVKS
SEPVKETVQTTQSPTPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPTVSLVPPAFPVSMP
VPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPAIPPVVPTSLVQPPLSMTP
ETVKDVGFGSLVLPGGSVASNLATSALPAGNVFNPPTKQAEPEEKVPHLIDHQIPSAENT
RSVIPNDISSGSAILGGQPPNVTSNSGILGVQRPNVSSNSEIIGVRPSNVSSSAGIIGPQ
PPNILNNSGILGLQPPTVSSSSGLLGVLPPNIPNNSGLIGVQPPNVPNTAGLLGTQPPAG
PQNLPPLNLPGQRMPAMPMLDIRPGLIPQTPGPRFPLIQPGIPPQRGIPPPSVLDSALHP
PPRGPFPPGDIFSQPERPFLVPGRQSVDNVTNPEKRIPLGNDNIQQEGDRDYRFPPMEAR
ESISRPPPVDVRDVVGRPIDPREGPGRPPLDGRDHFGRPPVDIRENLVRPGIDHLGRRDH
FGFNPEKPWGHRDFDEREHRVLPVYGGPKGLHEERGRFRSGNYRFDPRSGPWNRGFGQEV
HRDFDDRRRPWERQRDRDDRDFDFCREINGNRLGRDRIQNTWVPPPHARVFDFFEGATSQ
RKGDNVPQVNGENTERHAQPPPLPVQNDPELYEKLTSSSEINKEKSDTVADIESEPVVES
TETEGT
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atggacacaagaagcatattgtattccctgaatgactataaaccacccatttctaaagcc
aaaatgacccaaattactaaggctgccatcaaagctattaagttctataaacacgtggta
cagagtgttgagaaattcattcagaaatgtaaaccagaatacaaggtacctggactttat
gttattgactctattgtgcgacaatctcgacatcagtttggtcaagaaaaggatgtgttt
gcacccagatttagtaataacatcattagtactttccagaatttatatcgttgccctggg
gatgataagagtaaaatagtgagagtattaaacttatggcagaaaaataatgtgtttaag
agtgagattattcagcctcttctggatatggcagcagggattcctcccccggttgtcaca
cctgttttggccagtactactgctgctatgagcaacaccccaggaacgcctgtgacacct
gttactccagccaatgttgtccagggtctgcccgatccatgggtatctcagataacaaat
acagatacacttgccgctgtagctcagatcttacaaagtcctcaaggccaacagcttcag
cagttgatacaaactttacagctccagcagcagaagcctcagccttctatcctgcaggcc
ctggatgctgggctggttgtgcagttgcaagctctcacggcccagctgacggcggcagct
gcagcggccaacaccctgaaccccttagaacagggggtgtctttcaacaagaagttgatg
gataggtttgattttggggaagattctgagcatagtgaagaacccaaaaaggaaatttca
gcttctcaactttctcatgtttcagaatctgtgaacaattcaatttttcatcagatagca
gaacaactacagcagcaaaaccttgaacacctcagacagcagctcctggaacagcaacag
cctcaaaaggcaacccctcaggatagtcaggaaggaacatttggatcagaacattcagca
tcaccatcacaagggagcagtcaacagcatttcctcgaacctgaagcaaatttggatgat
tctatagatattcagcaacaggacatggatatagatgaagggcaagatggagtggaagag
gagatcttcgaacaagaagcaaaaaaagtggctgttcgctcaagatcaagaacacattca
cgatctcgttcaagatcgccaaggaaacgaaggtctcggtcgcgatctggttctcgaaag
cgtaaacacagaaagcgatcacgctcacgctcaagagaaagaaagaggaaatcatcacgt
tcatactcaagtgaaaggagagcaagagaaagggagaaagaacgacagaagaagggatta
cctccaattagatctaaaacattaagtgtatgtagtactactttatgggttggtcaggtg
gataagaaggcaacccagcaagatttaaccaatctgtttgaagagtttggacaaattgaa
tccattaatatgattcctcccaggggctgtgcatatgtctgcatggttcaccgacaagat
gctttccgggctcttcagaaacttagttctggatcatataaaattgggtccaaggtcatt
aagattgcttgggctttaaacaaaggtgtaaaaacagaatataaacaattttgggatgtg
gatcttggagttacatacataccatgggaaaaagttaaagtggatgacttggaaggtttt
gcagaaggaggcatgattgaccaggaaactgtaaatactgagtgggaaactgtgaaaagc
tcagaacctgttaaagagacggtccagacaactcagagcccaactccagttgaaaaggag
acagtggtcacaacccaggcagaggtttttcctccacctgttgctatgttacagattcca
gtggcgccagctgtgcctacagttagtttagttccaccagcatttccggtctccatgccg
gttcctcctcctggattcagtccaatccctccacctccttttctgcgagcgagttttaac
ccttcacaaccacctcctggtttcatgccacctccagttccaccacctgttgtaccgcca
cctgctattccgccagtagtaccaacatccttagtgcagccgccattatccatgactcca
gaaaccgtgaaagatgttggatttggtagtcttgttttaccgggtggttctgttgccagc
aatcttgctacttctgctctgccagctggaaatgtttttaatcctccaactaaacaagca
gagcctgaagaaaaagtacctcatcttatagaccaccagattccttctgctgaaaacacc
agatcagtgattccaaatgatatttcaagtggctctgcaattttaggaggacagccacca
aatgtgacaagcaattctggaattttgggagtccaaagaccaaatgtgtcgagtaattct
gaaattattggagtccggccatctaatgtttccagtagtgctgggattattggaccccag
ccaccaaatattctaaataactctggaattttgggactacagccaccaactgtgtcaagt
agttctggacttttgggagtgctacccccaaatattcctaataattcgggactaatagga
gtacagccaccaaatgttccgaacactgctggacttttgggaacacagccaccagccggg
cctcaaaacttaccccctttaaatctccctggtcaaaggatgcctgcgatgccaatgtta
gacattcgtccgggactaataccacagacacctggaccaagattccctttaatacagcct
ggaatcccaccccagcggggaatccctcccccgtcggtacttgattcagctcttcatcca
ccaccccgtggtccgtttcctccaggagatatttttagtcagccagaaagaccttttctg
gttcctggaagacaaagtgtagacaatgttactaatccagagaaaaggataccactcggg
aatgataacattcaacaggaaggagatagagattaccggtttcctcccatggaagccagg
gaaagcattagtagacctcccccggtggatgttagggatgtggttggacggcctatagat
ccaagagaaggtcctggaaggcctccgttagatggtagggatcattttggaagacctcct
gtcgatattagagagaatcttgtgaggccaggcatagatcatcttggtcgaagagaccac
tttggctttaatccagagaagccctgggggcacagagattttgatgagagagaacatcgg
gttctgcctgtctatggtggtccaaaaggcttacatgaagaaagaggtcgatttcggtct
ggaaattatcgatttgatcctagaagtggtccttggaacagaggatttggacaagaagtt
cacagagattttgatgaccgcagaagaccctgggagaggcaaagggatagggatgacaga
gattttgatttctgcagagaaattaatggaaaccgtcttggacgagatagaattcaaaac
acctgggtcccccctcctcatgctcgggtttttgatttttttgaaggggccacttctcaa
cgaaaaggtgataacgtgcctcaggttaatggtgaaaatactgagagacatgcccaacca
ccgcctttaccagtacagaatgatcctgaactttatgaaaaactgacatcttcaagtgaa
ataaacaaggagaagagtgacacagttgctgatatagaaagtgaaccagtggtagaaagc
acagaaactgaggggacataa
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