Panthera tigris altaica (Amur tiger): 102955753
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Entry
102955753 CDS
T02988
Symbol
NUP54
Name
(RefSeq) nucleoporin 54
KO
K14308
nuclear pore complex protein Nup54
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg03013
Nucleocytoplasmic transport
ptg05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102955753 (NUP54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102955753 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptg03019
]
102955753 (NUP54)
Messenger RNA biogenesis [BR:
ptg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102955753 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
102955753
NCBI-ProteinID:
XP_007074864
UniProt:
A0A8C9JNY9
LinkDB
All DBs
Position
Un
AA seq
508 aa
AA seq
DB search
MAFNFGAPSGTSGTAAATAAPAVGFGGFGTTSTTAGSAFSFSAPANTGTTGLFGGTQNKG
FGFGTGFGTTTGSSTGLGTGLGTGLGFGGFNTQQQQQQTTLGGLFSQPTQAPTQSNQLIN
TASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGYS
CMPNNKDEDGLVVLVFNKKETDIRSQQQQLVESLHKVLGGNQTLTVNVEGIKTLPDDQTE
VVIYVVERSPNGTSRRVPATTLYAHFEQTNIKTQLQQLGVTLSMTRTELSPAQIKQLLQN
PPAGVDPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDIS
ELQKNQTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQC
ELNAPTQFKGRLNELMSQIRMQNHFGAVKSEERYYIDADLLREIKQHLKQQQEGLSHLIS
IIKDDLEDIKLVEHGLNETIHIRGGVFS
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaactttggggctccctcgggcacctctggcaccgctgcagccaccgcggcc
cccgcggttgggtttggaggatttgggacaacatctacaacagctggttctgcattcagc
ttttctgctccagctaacacaggcactactggactcttcggtggtactcagaacaaaggg
tttggatttggtactggttttggcacaacaactggaagtagtactggtttaggtactggt
ttgggaactggactgggatttggaggatttaatacacagcagcagcaacagcaaactaca
ttaggtggtctcttcagtcagcctacacaagctcctacccagtccaaccaactgataaat
actgcaagtgctctttctgctccaacactgttgggagatgagagggatgctattttggca
aaatggaatcagctgcaggccttttggggaacaggaaaaggatatttcaacaacaacatt
ccaccagtggaattcacacaagaaaatcccttttgccgatttaaggcagtaggttatagt
tgtatgcccaataataaagacgaagatgggctagtggttttagttttcaacaaaaaagaa
acagatattcgaagccagcaacagcagttggtagaatcattgcataaagttttgggagga
aaccagacccttactgtaaatgtagagggtattaaaacactgccagatgatcagacggaa
gttgtcatttatgttgttgagcgttctccaaatggtacttcaagaagagttccagctaca
acactatatgcccattttgaacaaactaatataaaaacacagttgcagcaacttggtgta
accctttctatgactagaacagaactttctccagcacagatcaaacaacttttacagaat
cctcctgctggtgttgatcctattatttgggaacaagccaaggtagataatcctgattct
gaaaagttaattccggtacccatggtgggtttcaaagaacttcttcgaagactgaaggtt
caagatcagatgactaaacaacatcagaccagattagatatcatatctgaagatattagc
gaattacagaagaatcaaaccacaactatggccaaaattgcacaatacaagaggaaactc
atggacctttcccatagaactttacaggtcctaatcaaacaggaaattcagaggaagagt
gggtatgccattcaagctgatgaagagcagttgcgagttcagctagatacaattcagtgt
gaactgaatgcacctacccagtttaagggccgactaaatgaactgatgtcccaaatcagg
atgcagaatcattttggagcagtcaaatctgaggaaagatattacatagatgcagatctg
ttacgagaaatcaagcagcatttgaaacaacaacaggaaggccttagccatttgattagc
atcataaaagatgacctagaagatataaagttggtagaacatggattgaatgaaaccatc
cacatcagaggtggtgtctttagttga
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