Panthera tigris altaica (Amur tiger): 102955771
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Entry
102955771 CDS
T02988
Symbol
COL13A1
Name
(RefSeq) collagen type XIII alpha 1 chain
KO
K16617
collagen type XIII alpha
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102955771 (COL13A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ptg00536
]
102955771 (COL13A1)
Glycosaminoglycan binding proteins [BR:
ptg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102955771 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
102955771
NCBI-ProteinID:
XP_015399077
LinkDB
All DBs
Position
Un
AA seq
799 aa
AA seq
DB search
MAPPPGPRSKSSLGGTLPSPISIFPNSAEAHVPLHPREGQTSKRLIQFKCGPETPDQALP
SKNWLDLQQDAIPVTVWHGVMKGALADGMAHRCGPGDTKSYDFLYLSRAQPERQNHTALR
RQTMEKCALGAGPLASHLLRMQGPQYTGQSQRLRATPADPSQGLAFQSVIPLLCLLSQKW
KLHSRRRREAPPKTSAGCHCPPGPPGPAGRPGLPGDKGAIGIPGRVGAPGDAGMSIIGPR
GPPGQPGARGFPGFPGPIGLDGKPGHPGPKGEMGLMGPRGQPGPQGQKGEKGQCGEYPHR
LLPLLNSVRLAPPPVIKRRTFQGEQGQAGIQGPPGPPGPPGPSGPLGPPGLPGPMGPPGL
PGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGITVAGMKGEPGTPGAKGEKGAA
GSPGLLGLLGQKGEKGDAGNSFGGGRGEPGPPGLPGPPGPKGEAGVDGQAGPPGRQGDKG
EPGAAGEQGPAGPKGSKGEPGKEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPG
IPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKAGPTGMKGEDGHVGSPGEKG
EKGETGQAGPPGLDGPTGEKGEPGGQGRPGTTGLPGPIGLPGFTGEKGEPGEKGDPGVEV
PGPPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGVQGEKGDRGPLGLPGTPGPVGVPGP
AGPKGERGSKGDLGMTGPSGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGL
DAPCPLGEDGLPVQGCWNK
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggcaccccctcccggcccccggagcaagtccagtttgggcggaacgctcccctccccc
atctccatctttccaaattctgccgaagcccacgtccccctgcaccccagggaagggcag
acctccaagcgattaatccagttcaagtgtggacccgaaacaccagaccaggccctgccc
tccaagaactggcttgatctccaacaggacgccatcccagtgaccgtgtggcacggggtg
atgaaaggggctctggcagatgggatggcacaccgctgtgggccaggtgacaccaaatcc
tatgactttctttacctctcccgggcccagcctgagcggcagaaccacacagcactgagg
aggcagacgatggagaaatgtgcattgggggctgggccgctggcctcccacctgcttcgc
atgcagggacctcagtatactggtcagagtcagcgcctgcgagccacgcctgcagaccct
tcccagggcttggccttccaatccgtgatccctcttctctgtctcctttcgcagaaatgg
aagctccactctcggaggcgccgggaggcccccccgaagacgtctgcagggtgtcactgc
ccaccaggacctcctggtcccgctggaagacccggcctcccaggggacaaaggtgccatt
gggattcctggacgtgtgggggccccaggagatgccggcatgtccatcatcggtccccgc
ggcccccctggtcagccgggcgctcgaggttttcctggatttccgggtcccatcgggcta
gatggaaaaccgggccaccccggacccaaaggagagatgggcctgatgggtccccgagga
cagccgggacctcaaggacaaaaaggagaaaagggtcagtgtggagagtacccacatcgg
ctgctgcctctcctcaattcagtgcgactggctccacccccagtcataaaaaggcggacc
ttccagggtgaacagggccaggccggtatccaaggaccaccggggccaccaggcccccct
ggaccgagcggacctctggggcccccgggactgccagggcccatggggccacccggctta
cctgggcctccaggaccaaagggagacccaggaatccagggctaccacggccgaaaggga
gaacgaggcatgccggggatgccgggcaaacacggagccaagggggctcccggaatcacc
gtggcggggatgaagggtgagccggggaccccaggagccaagggcgaaaagggggctgca
ggctcccccgggctgctcggcctcctggggcagaagggagaaaaaggcgacgctggcaac
tcctttggagggggcagaggggagcccggccccccagggctacctgggcccccaggccca
aagggagaagctggtgttgatggccaggccggccccccgggacggcaaggagacaagggt
gagcccggagcagccggagaacagggaccggctggccccaagggcagcaagggggaacca
ggcaaagaaatggtggactataatgggaacatcaacgaggctctccaggagatccgaacg
ctggccttgatggggccccctggccttcccgggcaaatcggcccacccggagccccgggg
atcccaggccagaagggggagattggacttccaggccctccaggacacgatggggaaaag
ggacctcgaggcaaaccaggcgacatgggccctcccggtccccaaggccccccaggaaag
gctgggcccacaggaatgaagggtgaagacggacacgtggggagcccgggagaaaagggg
gagaaaggggagacggggcaagcaggcccaccgggtctagacggcccaactggggagaaa
ggagaaccaggtggccaagggagacccggaacaacaggattgcctggcccgatcgggctc
ccgggatttacaggggagaaaggagagcccggggagaagggagacccaggagtggaggtt
cctgggcccccagggccagaggggcctcccggacctccgggactccaaggtgttcctgga
ccaaagggggaagcgggactggatggagcaaaaggagagaagggtgtccagggagagaaa
ggagaccgagggccgctgggattacccggtactccaggaccagtcggagttccaggccca
gcgggaccaaagggcgagaggggcagcaaaggagaccttgggatgacaggaccatcagga
gcggctgggcttcctggtttacatggaccacccggggacaaaggaaaccggggggagagg
gggaagaaaggctctagagggcctaaaggggataagggagaccaaggagcgcctggatta
gacgccccctgcccgttgggcgaagatggcttaccagtccagggctgttggaacaagtga
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