Panthera tigris altaica (Amur tiger): 102955945
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Entry
102955945 CDS
T02988
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes 1B
KO
K06636
structural maintenance of chromosome 1
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg04110
Cell cycle
ptg04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102955945 (SMC1B)
04114 Oocyte meiosis
102955945 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptg03036
]
102955945 (SMC1B)
Chromosome and associated proteins [BR:
ptg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
102955945 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
102955945 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
AAA_29
ATG16
Ca_chan_IQ
CTD12
Motif
Other DBs
NCBI-GeneID:
102955945
NCBI-ProteinID:
XP_007093385
UniProt:
A0A8C9JCQ0
LinkDB
All DBs
Position
Un
AA seq
1235 aa
AA seq
DB search
MGRLEVLLVENFKSWRGRQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKTANLRVKN
IQELIYGAHIGKPVSSCASVKIVYVEESGEEKTFTRIIRGGCSEFHFDDNPVSRSAYIAE
LEKIGVMVKARNCLVFQGTVESISMKKPKERTQFFEEISTSGELIGEYEEKKRKLLKAEE
DAQFNFNKKKNVAAERKHAKLEKEEAERYQSLLEELKINKIQLQLFQLYHNERKIRFLNT
ELERVNRNLSVTKESLSDHENIVKAKKKEHGVLTRKLQQTEKELKSLEALLNQKRPQYIK
AKENTSHHLKKLDVAKKSIKDSEKQCSKQEDDIKALETELVDLDGAWRSFEKQVEEELLY
KGRDIELEASQLDRYKELKEQVRKKVAIMTQQLEKLQWEQRADKERLAFEKRRHGEVQEN
VKQIKEQIEDHKKRIEKLEEYTKTCMDCLKEKKQQEETLVVEIENTKSRMSEVNEELNLI
RSELQNAGIDKHEGKRQQKRAEVLEHLKRLYPDSVFGRLLDLCHPIHKKYQLAVTKLFGR
YMVAIVVASEKVAKDCIRFLKEERAEPETFLALDYLDIKPINERLREIKGCKMMIDVIKT
QFPQLKKVIQFVCGNGLVCETVEEARHIAFGGPERRKTVALDGTLFLKSGVISGGSSDLK
YKARCWDEKEIKNLKDRRTQLIQELKDLMKILRKEADLKQIQTLVQGTHTRLKYSQSELE
MIKKKQLAAFYREQSQLQSELLNIESQCTMLSEGVKERQQRIEEFQEEIDKVEDDIFQHF
CEEIGVENIREFEKKHVKQQQEIDQKRLEFEKQKTLLNIQLEYSRNQLKKKLNKIRTLEE
TIEKGREDIDNLKKAEETCLQIVDELMAKRQQLKDVFVTQNANTEKVQAQLEEERKKVLA
IDREVAKWQKEVVIIQTSLEQKRLEKHNLLLDCKVQDLEIILLLGSLDDIVEVELGTEAE
STQATSDIYEKEAAIEVDYSSLGEDLKALQTDKEVEARLRLLLQQVASQEEVLLKTAAPN
LRALENLKTVRDKFQESTDAFEASRKEARVCRQEFEQVKKRRYDLFSQCFEHVSVSIDQI
YKKLCRNVSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAV
HSFRPAPFFVLDEVDAALDNTNVGKVSSYIKEQTQEQFQMIIISLKEEFYSQADALIGIY
PEFDDRMFSRVLTLDLSQYPDTEGQESSKRNQESR
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgggccgtttggaggtgttgctcgtggagaactttaagtcgtggcggggccgccaggtc
atcggccccttcaggaggttcacctgcatcatcggccccaacggctccggaaaatctaat
gtaatggatgcacttagttttgtaatgggagagaaaacagctaatttaagagtgaaaaat
attcaagaactcatttatggagcacatattggaaaacctgtctcttcttgtgcgagtgta
aaaattgtgtacgtggaggaaagtggagaggagaaaacatttacaaggattatccgaggg
ggatgctcggaatttcattttgatgataatcccgtgagtcgttctgcttacatagccgag
ttggaaaagataggcgtaatggtcaaagcacggaactgtctcgtttttcagggaactgta
gagtcgatttcaatgaaaaaacccaaagaaagaacccagttttttgaggaaatcagcact
tcaggagagctcataggagaatatgaggaaaagaaaagaaagttactgaaagccgaagag
gatgcacagtttaattttaataagaaaaaaaatgtggctgcagagcgcaaacatgcaaag
ttagagaaagaagaggcagaacgttaccagagtctccttgaagaactgaaaataaacaaa
atacaattacagcttttccaactatatcataatgaaaggaaaattcgttttctgaacacc
gagttagagcgtgtgaacaggaatttgagtgtcacaaaagagtctctttctgatcatgaa
aacatagttaaagccaagaaaaaggaacatggagtgctaactagaaaactacaacaaaca
gaaaaagagttaaaatctcttgaagcacttttaaatcagaaaaggcctcaatacattaaa
gccaaagaaaatacttctcaccacctcaagaaattagatgtggctaagaaatcaataaag
gacagtgaaaaacaatgttctaaacaggaagatgacataaaggccctggagacagagctg
gttgatttagatggtgcatggagaagttttgagaagcaggttgaggaagaactcttatac
aaagggcgagacattgaactagaagccagtcagctggatcgttataaagaacttaaggaa
caagtaagaaagaaagtggctataatgacccaacaactggaaaagctgcagtgggaacag
agggctgataaagaaagactggcattcgagaagaggaggcatggagaagttcaggaaaat
gtaaaacaaataaaagagcagatagaagatcataaaaaacgaatagagaagttggaagaa
tatacgaaaacatgcatggattgcttgaaagagaaaaaacagcaagaggaaaccctagtg
gttgaaattgaaaacacaaaatcaagaatgtctgaagttaatgaagaattgaaccttatt
agaagtgaattgcagaatgctggaattgataaacatgagggaaaacgtcagcagaagaga
gcagaagttctagaacaccttaaaagactttacccagattctgtgtttggaagactgctt
gacctctgccaccctattcataagaaataccaactggctgttactaaactttttggtcgc
tacatggttgccattgttgtagcctctgagaaggtagcaaaagattgtattcgatttctg
aaggaggaaagagctgaaccggagacattccttgctctagattaccttgatatcaagcca
atcaatgaaagactgagggagattaaaggctgtaaaatgatgattgatgtcataaagact
cagtttcctcagctgaagaaagtaattcagttcgtatgtggaaatggccttgtctgtgag
actgtggaggaagcaaggcatattgcattcggtggacctgaaagacggaaaacagtagct
cttgatggaacattatttttaaaatctggggtgatctctggaggatcaagtgacttaaaa
tacaaggctagatgctgggatgagaaggagataaagaacttaaaagacagaagaacccag
ctgatccaggaattaaaggatctaatgaagatacttcgcaaggaagctgacttgaaacaa
atacagactctagtacaaggaactcatacacgactcaaatattcccagagtgaactagag
atgattaaaaagaagcaacttgctgctttttaccgggaacaatctcagctacagagtgag
ctgctgaacattgagtctcaatgtactatgttgagtgaaggtgtgaaagaacggcaacaa
cgaatcgaagaatttcaagaggagatagacaaggttgaagatgatattttccaacacttc
tgtgaagaaattggtgtggaaaatattcgtgaatttgagaagaaacatgttaaacagcaa
caagaaattgatcaaaaaagattagaatttgagaaacagaaaactctgcttaatattcaa
ctcgaatatagtcgcaatcagctgaagaagaagctgaataagatccgtacattagaagaa
accatcgaaaaaggcagagaagacatcgataacctaaagaaggctgaagaaacttgtctg
caaattgtggatgaactcatggcgaagcggcagcaacttaaggacgtatttgtcactcag
aatgccaacacggagaaggtccaagctcagcttgaagaagaacggaagaaagttctggct
attgatagggaagtggcaaaatggcaaaaagaagttgtcatcattcagacttctttggaa
cagaaacggctagagaagcacaatctgctgcttgactgcaaagttcaagaccttgaaata
attcttttgttgggatcgctggacgacatcgttgaagtggagttgggcactgaagcagaa
agtacccaggcaacaagtgacatctatgaaaaagaagcagccattgaggtagactacagc
tccctgggagaggatttgaaggcgttacaaacggataaagaagtggaggcccgcctcaga
ctcctgctgcagcaggtggcgtcccaggaggaggtcctgttgaagacggcggccccaaac
ctgagagccctggagaacctgaagaccgtcagggacaagttccaggagtccacagacgct
tttgaggccagcagaaaggaagccagagtgtgtaggcaagagtttgaacaggtgaaaaaa
aggagatacgacctcttcagccagtgttttgagcacgtctccgtctccattgatcaaatc
tacaagaagctctgcagaaacgtcagcgcccaagcatttcttagcccagaaaacccagaa
gagccttacctagagggaatcagctataactgtgtggctccaggcaaacggttcatgcca
atggacaatctgtcggggggagaaaagtgtgtggcagctttggccctcctgttcgcggtg
cacagttttcggcccgctccgttctttgtcttagatgaggtggacgcagccctggacaac
actaacgttggcaaagtctcaagttacatcaaagagcagactcaggagcagtttcagatg
ataatcatttccctaaaagaggagttctattcccaggccgacgcgctgataggcatctac
ccggagttcgacgaccgcatgttcagtagagttctgaccctggatctttctcagtatcca
gacactgaaggccaagaaagcagcaagagaaaccaagagtcgcgttag
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