KEGG   Panthera tigris altaica (Amur tiger): 102956276
Entry
102956276         CDS       T02988                                 
Symbol
ATG13
Name
(RefSeq) autophagy related 13
  KO
K08331  autophagy-related protein 13
Organism
ptg  Panthera tigris altaica (Amur tiger)
Pathway
ptg04136  Autophagy - other
ptg04140  Autophagy - animal
ptg04211  Longevity regulating pathway
ptg05010  Alzheimer disease
ptg05014  Amyotrophic lateral sclerosis
ptg05016  Huntington disease
ptg05017  Spinocerebellar ataxia
ptg05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:ptg00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    102956276 (ATG13)
   04136 Autophagy - other
    102956276 (ATG13)
 09150 Organismal Systems
  09149 Aging
   04211 Longevity regulating pathway
    102956276 (ATG13)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    102956276 (ATG13)
   05014 Amyotrophic lateral sclerosis
    102956276 (ATG13)
   05016 Huntington disease
    102956276 (ATG13)
   05017 Spinocerebellar ataxia
    102956276 (ATG13)
   05022 Pathways of neurodegeneration - multiple diseases
    102956276 (ATG13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ptg04131]
    102956276 (ATG13)
   03029 Mitochondrial biogenesis [BR:ptg03029]
    102956276 (ATG13)
Membrane trafficking [BR:ptg04131]
 Autophagy
  Autophagosome formation proteins
   ULK complex
    102956276 (ATG13)
   Atg1 complex
    102956276 (ATG13)
Mitochondrial biogenesis [BR:ptg03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-independent mechanism factors
    102956276 (ATG13)
SSDB
Motif
Pfam: ATG13
Other DBs
NCBI-GeneID: 102956276
NCBI-ProteinID: XP_007082179
UniProt: A0A8C9K7I3
LinkDB
Position
Un
AA seq 550 aa
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGG
TYPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHFQTPTPVVTDTLRVPMAGLAFSHQLSSS
RLSYQPAALGVGSADLAYPVVFAAGLNATHPHQLMVPGKEGGVPLAPNQPAHGAQADQER
LATYTPSDGARCAATPSSSEDTETVSNSSEGRASPHDVLETIFVRKVGAFVNKPINQVTL
TSLDIPFAMFAPKNLELEDADPMVNPPDSPETESPLQGSLHSDGSSGGSSGNTHDDFVMI
DFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVR
EFDAFVETLQ
NT seq 1653 nt   +upstreamnt  +downstreamnt
atggaaactgatctcaattcccaggacagaaaggacctggacaagtttattaaatttttt
gccctcaagactgtccaagtgattgtccaggctcgacttggtgagaagatttgtactcgt
tcatcttcatccccgacgggttcagactggttcaatttagcaatcaaagatatcccagag
gttacacatgaagcaaaaaaggccctggcaggacagctgcctgccgttgggagatcgatg
tgtgtggagatctcactcaagacttctgagggcgattccatggagctagaaatttggtgt
cttgaaatgaatgaaaagtgtgataaagagattaaagtttcctacacggtgtacaacaga
ctgtcactgctgctgaagtccctccttgccataactagggtcacaccggcttacagactc
tccagaaaacaggggcatgaatatgtcatattgtacaggatatattttggggaagttcag
ctgaatggtttaggagaaggtttccagacagtgcgtgttgggacagtaggcacccctgtg
ggcaccatcactctttcttgtgcttacagaattaacttggcatttatgtctaccaggcaa
tttgagaggaccccacctatcatggggattatcattgatcactttgtggaccgtccgtat
cccagctcctcacccatgcacccctgcaattacagaactgctggtgaggacactggagga
acatatccttctgtggaagattctcaagaagtgtgtaccacctctttctccacctcccct
ccttcccagtgtgtgtttactgtcacaaaggcacattttcagacccctactcctgtggtg
acggacactctgagggtccccatggcaggactggccttttcccatcaactctcaagctct
cgcctttcctatcagcctgctgccctgggcgttggatcagctgacctggcttacccagta
gtgtttgctgctggcttaaacgccacacaccctcaccagctcatggttcctgggaaggaa
ggtggggtacccctcgctcccaaccagcctgcacacggtgctcaggccgaccaggagaga
ttggcgacctacaccccttctgatggggcccgctgtgctgccacaccttccagcagtgag
gatactgaaactgtatcaaacagcagtgagggccgggcttccccccatgatgtcttggaa
accatctttgtccgaaaagtgggggcttttgtcaacaagcccatcaaccaggtgaccctg
accagtttggacataccctttgccatgtttgctcccaagaatttggagttggaggatgcc
gatcccatggtgaatcctccagattccccagagactgaatctcctctccagggcagcctg
cactctgatggctccagtgggggtagcagtggcaatacccacgatgactttgttatgatc
gacttcaaaccggctttttctaaagatgacattcttccgatggatttggggaccttctat
cgtgaatttcaaaatccccctcagctgagcagcctctccatagatatcggggcacagtcc
atggctgaggacttggactcactaccagagaagctggctgtgcacgagaagaatgtccga
gaatttgatgcctttgtagaaactctgcagtaa

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