KEGG   Panthera tigris altaica (Amur tiger): 102956351
Entry
102956351         CDS       T02988                                 
Symbol
PCDHB5
Name
(RefSeq) protocadherin beta 5
  KO
K16494  protocadherin beta
Organism
ptg  Panthera tigris altaica (Amur tiger)
Brite
KEGG Orthology (KO) [BR:ptg00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ptg04515]
    102956351 (PCDHB5)
Cell adhesion molecules [BR:ptg04515]
 Cadherins
  Protocadherins
   102956351 (PCDHB5)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_CELSR2_9th Cadherin_4 EndoS_Ig-like
Other DBs
NCBI-GeneID: 102956351
NCBI-ProteinID: XP_007078042
LinkDB
Position
Un
AA seq 639 aa
METALAKTPQKRQVLFLAILMLLWEAGCDSIRYSIPEETESGSFVANLAKDLGLRVGELA
TRGARIHYKGNKQLLELDVETGNLLLYEKLDREVLCGVTDPCILYFQLLLENPVQFFQAD
LQLTDINDHSPEFLDKEMLLKIPESVQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHV
VTHNRGDGRKYPELMLDKSLDREEQSELSLTLTALDGGDPPRSGTTAVRIEVVDINDNAP
AFLQSLYEVQVPENSPPNSLVVVVSAQDLDAGTYGNVRYTLFQGNQVIQPFVVDEITGEI
HLKKALDFEATRYYNVEIAGTDGGGLSGKCTVAIEVVDVNDNAPELTMSTLTSTTPENSP
ETVVAVFSVSDPDSGDNGRMVCSIQNDLPFLLKPTFKNFYTLVTEKPLDRESQAEYNITI
TVTDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRENNSPALHIGSVSATDRDSG
ANAQVTYSLLPPADPQLPLASLVSINADNGQLFALRSLDYEALQAFEFGVRALVVALASV
SSLFLFSVLVFVAVRLCRRSRAASAGRCSGPEGHFPGHLVDVSGAGTLSQSYQYEVCLTG
GSETSEFKFLKPIIPNFPPQGIGKEMEENATFRNSFGFN
NT seq 1920 nt   +upstreamnt  +downstreamnt
atggagacagcgctagcaaaaacgccacagaaaaggcaagttctctttcttgctatattg
atgcttttgtgggaggctggctgtgactcaattaggtattccattccagaagaaacagaa
agtggctcctttgtggccaacctggcaaaggacctggggctcagggtgggggaactagct
actcgaggcgcgcgaatccattacaaaggaaacaaacagctcttggaactggatgtagaa
accgggaatttgctgctatatgaaaaactagaccgggaggtgctgtgcggagtgacagat
ccctgtatactgtacttccagttattactggaaaacccagtgcagttttttcaggctgat
ctgcagctcacagatataaatgaccattccccagagttcctagacaaggaaatgctcctc
aaaatcccagaaagcgttcagcctgggactgtatttcctttgaaaatagctcaggacttt
gacataggtagcaacactgttcagaactacacaatcagccccaactcccattttcatgtt
gtcactcataatcgcggagatggcagaaaatacccagagctcatgctggacaaatcgctg
gaccgggaggagcagtctgaactcagtttaacccttacggcgctggatggtggggatcca
cctaggtccgggaccactgcagtccgtattgaagtcgtggacatcaatgataatgcccct
gcgtttttacagtcgctctatgaggtacaggtcccggagaacagccccccaaactcctta
gttgtcgttgtctctgcccaagatttagatgcaggaacatatgggaatgtacgctacact
ctattccaaggcaatcaagttattcaaccatttgtagtagacgaaataacaggagaaatt
catctgaaaaaggcattggatttcgaggcaactcgatactataacgtggaaattgcaggc
acagacggtgggggcctttcaggaaaatgcactgtagctatagaagttgtggatgtgaat
gacaacgcccccgaactgaccatgtcaacgctcacaagcacaaccccagaaaactcccca
gagactgtagttgctgttttcagtgtttctgatccagactccggggacaacggtaggatg
gtttgctccatccagaacgatcttccctttctcttgaaacccacattcaagaacttttac
accctagttacagaaaagccactggacagagaaagccaagccgagtacaacatcaccatc
acggtcaccgacttggggacccccaggctgaaaacgcagcacaacataaccgtgacggtc
tccgacgtcaacgacaacgcccccgccttcagccaaaccacctacaccctgcgcgtccgc
gagaacaacagccccgccctgcacatcggcagcgtgagcgccacggacagggactcgggc
gccaacgcccaggtcacctactcgctgctgccgcccgcggacccgcagctgcccctggcc
tccctggtgtccatcaacgcggacaacgggcagctgttcgcgctcaggtccctggattac
gaggcgctgcaggcgttcgagttcggcgtgcgcgcgttggtggtggccttggcgtccgtg
tcgtctctcttcctgttctcggtgctggtgttcgtggcggtgcggctgtgcaggcggagc
cgggcggcgtctgcgggtcgctgctcggggcccgagggccactttccgggccacctggtg
gacgtcagcggcgcggggacgctgtcccagagctaccagtatgaggtgtgtctgacggga
ggctcggagactagtgagttcaagttcttgaagccgattatcccgaacttccctccccag
ggcattggaaaggaaatggaggaaaacgccaccttccggaatagctttggattcaattag

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