Panthera tigris altaica (Amur tiger): 102956409
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Entry
102956409 CDS
T02988
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA processing factor 40 homolog B
KO
K12821
pre-mRNA-processing factor 40
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102956409 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptg03041
]
102956409 (PRPF40B)
Spliceosome [BR:
ptg03041
]
Complex A
U1 snRNP components
U1 related factors
102956409 (PRPF40B)
Complex B
102956409 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DUF4936
RhoGAP-FF1
WW_2
Motif
Other DBs
NCBI-GeneID:
102956409
NCBI-ProteinID:
XP_007073047
LinkDB
All DBs
Position
Un
AA seq
849 aa
AA seq
DB search
MMPPPFMPPPGIPPPFPPMGLPPMSQRPPAIPPMPPGIMPPMLPPMGAPPPLTQIPGMVP
PMMPGMLMPAVPVTAATAPGADTASSAVAGTGPPRALWSEHVAPDGRIYYYNADDKQSVW
EKPSVLKSKAELLLSQCPWKEYKSDTGKPYYYNNQTLVKQEAAGKPQPQPPQPQPEPPPV
PPGPTPMPLGLLEPEPGGSEDCDMSEAALSVEQGFLQQPEEGPSSAAGQHQPPQQEEEES
KPEPERSGLSWSNREKAKQAFKELLRDKAVPSNASWEQAMKMVVTDPRYSALPKLSEKKQ
AFNAYKAQREKEEKEEARLRAKEAKQTLQHFLEQHERMTSTTRYRRAEQTFGELEVWAVV
PERDRKEVYDDVLFFLAKKEKEQAKQLRRRNIQALKSILDGMSSVNFQTTWSQAQQYLMD
NPSFAQDHQLQNMDKEDALICFEEHIRALEREEEEERERARLRERRQQRKNREAFQTFLD
ELHETGQLHSMSTWMELYPAVSTDVRFANMLGQPGSTPLDLFKFYVEELKARFHDEKKII
KDILKDRGFCVEVNTAFEDFAHVISFDKRAAALDAGNIKLTFNSLLEKAEAREREREKEE
ARRMRRREAAFRSMLRQAVPALELGTAWEEVRERFVCDSAFEQITLESERIRLFREFLQV
LETECQHLHTKGRKHGRKGKKHHRKRSHSPSGSESEEEELPPPSLRPPKRRRRNPSESGS
EPSSSLDSVESGGAALGGRGSPSSRLLLGSDHGLRKAKKPKKKTKKRRHKSNSPESETDP
EEKAGKESDEKEPEQDKDRELRRAELPNRSPGFGIKKEKTGWDTSESELSEGELERRRRT
LLQQLDDHQ
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgatgccaccacccttcatgccccctccaggaatccccccaccctttcctccgatggga
ctacctcccatgagtcagagaccgccagccatccccccaatgccacctggcatcatgccc
ccaatgcttccaccaatgggggcgccaccaccactcacacagataccaggaatggtacct
cccatgatgccaggaatgctgatgccagcggtgcctgtcaccgcagcgacggctccgggt
gcggacacagccagctctgctgtggctgggacaggccctccgagggccctgtggagtgag
catgtggcccctgatgggcgcatctactactacaatgctgacgacaagcagtccgtgtgg
gagaagcccagcgtgctcaagtccaaggcagagttgctgctgtctcagtgtccctggaaa
gagtacaagtcagacacgggcaaaccttactactataacaaccagactctagtcaaacaa
gaggctgcagggaagccccagccgcagccacctcagccccagcctgagcccccacctgtg
ccgcccggccccacccctatgcctctgggccttctagagcctgagccaggtggcagtgaa
gattgcgatatgtcagaggctgccctgtctgtggagcaagggtttctgcagcagccggag
gagggccccagcagtgctgctggacagcatcagccaccgcagcaggaggaagaggaatca
aagccagaaccagagaggtctggcctcagttggagcaaccgggagaaagcaaagcaggcc
ttcaaggagctgctgagggacaaggctgtcccctccaacgcctcgtgggaacaggccatg
aagatggtggtcaccgacccccgttacagtgccttgcccaaactgagtgagaaaaagcag
gcattcaatgcctacaaggctcagcgggagaaggaggagaaggaagaggcccggctaagg
gccaaggaggccaagcagaccttgcagcatttcctggagcagcacgaacgcatgacctct
accacccgctaccggcgggcagaacagacctttggggagctggaggtatgggctgtggtc
cctgagagggatcgaaaagaggtttatgatgatgtcctcttcttcctggccaagaaggag
aaggaacaggccaagcagctccggcgccgcaacatccaggccctgaagagcatcctggat
gggatgagtagtgtcaacttccaaaccacatggtcccaggcccagcagtacctcatggat
aaccccagctttgctcaggaccaccagctgcagaacatggacaaggaagatgcactgatc
tgctttgaggagcacatccgagctttggagagggaggaggaggaagagcgggagcgggcc
cgccttcgggagcggcgtcagcaacgcaagaaccgggaggccttccagaccttcctggat
gagctgcatgagacagggcagctgcactccatgtccacctggatggagctgtacccagcg
gtcagcactgatgtccgctttgccaacatgctgggccagccgggctccacccctctggac
ttgttcaagttctatgtggaggagttgaaggcacgattccatgatgagaagaagatcatt
aaggacattcttaaggaccggggcttctgcgtggaggtgaacacagcctttgaggacttc
gcccacgtcataagctttgacaagagggctgctgcgctggacgcaggcaacatcaagctg
accttcaatagtctgctggagaaagcagaggcacgggagagagagcgggagaaggaggag
gcgcgaaggatgcggcgcagggaagctgccttccgaagcatgctgaggcaggccgtgcct
gctctggagctgggcactgcctgggaagaggtccgtgagcgctttgtgtgcgactcagcc
tttgagcagatcaccctggagtcggagcggatccggctcttccgggagttcctgcaggta
ctggagactgaatgccagcacctccacaccaaaggccgaaaacatggcagaaagggcaag
aagcaccatcgaaagcgttcccattcgccatcaggttctgagtcggaagaggaggagttg
cccccgccgtctctccgaccccccaaacggagaaggcggaacccctcggagtcaggctct
gagccctcttcctcacttgattcggttgaaagtgggggtgctgcccttggaggacggggt
tccccatcttctcgccttctccttggatcagatcatggccttcggaaagccaagaaacca
aaaaagaaaactaagaagagaagacacaagtcgaacagtcctgagagcgagacagaccct
gaggagaaagctggcaaggagagtgatgagaaagaaccagaacaggacaaggacagggag
ctccggcgggcagaactccccaaccgctccccaggttttggaatcaagaaggagaagacg
ggctgggacacgtcggaaagtgagctgagcgagggtgagctggaaagacggcggcggaca
ctcctgcagcagctggatgaccaccagtga
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integrated database retrieval system
