Panthera tigris altaica (Amur tiger): 102956458
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Entry
102956458 CDS
T02988
Symbol
PKD1
Name
(RefSeq) polycystin 1, transient receptor potential channel interacting
KO
K04985
polycystin 1
Organism
ptg
Panthera tigris altaica (Amur tiger)
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ptg03037
]
102956458 (PKD1)
04812 Cytoskeleton proteins [BR:
ptg04812
]
102956458 (PKD1)
04040 Ion channels [BR:
ptg04040
]
102956458 (PKD1)
04091 Lectins [BR:
ptg04091
]
102956458 (PKD1)
Cilium and associated proteins [BR:
ptg03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
102956458 (PKD1)
Cytoskeleton proteins [BR:
ptg04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
102956458 (PKD1)
Ion channels [BR:
ptg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102956458 (PKD1)
Lectins [BR:
ptg04091
]
C-Type lectins
Others
102956458 (PKD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REJ
PKD
PKD_4
Polycystin_dom
PLAT
LRR_8
K319L-like_PKD
LRR_4
Lectin_C
GPS
Motif
Other DBs
NCBI-GeneID:
102956458
NCBI-ProteinID:
XP_015400491
LinkDB
All DBs
Position
Un
AA seq
3041 aa
AA seq
DB search
MGLGRIGTSRVPSCSPLTFPELHGELKPVSTYKLPTVAETWKQPRCLAPVEQIHGMWSIH
TVEYHSAIKRNKALAPATAWMRLENMFGEGSQTRVPVLNDFTGYGTLASRVLGSLLVFSV
PCGPGSAQRPRPPASLSSDIRGSVPCPAHPGNHLAGSGLSSLGGPGTYTSRDVSHNLLRA
LDAGLLANLSALTELDISNNKISTLEEGLFANLFNLSEMGPTLLDKVFPASPGAALVGPP
GPLASGQPAAFHITASLPVSSTHWDFGDGSPKVDVAGPATTHRYSLPGHYQVTAVLALGA
GSAQLGAKVQVEAAPAALELECPVSVLSDETLKLGVRNRGGSGLEATYSIVSLGEEPGRV
VHPLCPSDTVIFPGNGHCYRLVAEKAAWLQAQEQCRAWAGAALAMVDSPAVQHFLVSQVT
RSLDVWIGFSAVEGAEAGPAVRGEAFSLESCQNWLPGEPHRQVAQSWVWPCLGPADTLFL
GPRPAPYCTRTVPGPVWDAENFLVGAPPGDLQGPLSPLAQQEALSAPQEPVERRVGSPLP
CKGESPVWGLXLSREAFLVAAEFGTQELHRPAQLRLQVFRPEGGAGAPGHGGEPQRVSLE
SQALPVPACTPEGRWCPQTGIPLSPDTLCRPRACANASTSGPGPPGTSCVLWKEFLFSVP
AGPPTQYSVPFQGQDGPLLPGDLVTLQHDAGPGALLHCSPALGPPGPEAPYLSAVASCRA
ACPAPVAALVPSCALEANTTLFSVLALPGLREGEHTVEVVVENSAGRANLSLQVKAEEPL
WGLRATPSPEARVLQGVLVRYSPMVEAGSDVVFRWTIDDKQSLTFHNVPTHCYLSPQLTA
SNHVSNVTVNYNVTVERMNRMRGLWVSAVPPVLPPNATLALAAHVLVDSAVEVAFLWTFG
DGAQVIGQFKPPYNESFPVPDPAVAQVLVAHSVTHTYAVPGEYNLTLLVSNAFENLTRRV
SVSVRATLPAVAVGHFGRWVESRVLVAGQSVTFAPHPLPSPGGILYTWDFGDGSPAVTQH
RPEVNHTYSSGGTYRVHLEVNNTVSSVAACVGIRVFEELRGLSVSLSPSVEQGAPVTVSA
ALESGDNVTWTFDMGDGTVLTGPEATVEHVYLRARNCTVTVGASSPAGRLALSLPLQVFV
LEVLRIEPAACIPVQPLARLTAHVPGDPTHYIFDWTFGDGSSNATVSGDPTVTHNFTRSG
TFPLTLVLSSHVNKAHYFTSVCVEPELGNVTLWPERQSVRLGDEARWVARAWPPFLYRYT
WDFGTEDPARVGGPEALPGPRFSRSFPRAGDYTLSVQAENHVSRAQAQVRILVLEAVGGL
QVPNCCEPGIPTGTERNFTARVQRGSRVAYAWYFSLQKVQGDSLVILSGRDVTYTPVAAG
LLEIHVRAFNELGGVNRTLVVEVQDTIQHVVLRSGRCFTNRSARFEAATSPSPRRVAYRW
DFGDGAPAEDTEEPWAEHSYLQPGDYRMEVNASNLVSFFVAQATVTVHVLACREPEVDVA
LPPQVLMRRSQRNYLEAHVNLRDCVTYQTEYRWEVYRAAGCHRPVRVAPVALPSVDMSRP
QLVVPRLALPVGHYCFVFLVSFGDTPLARSIQANVTVVPERLVPIIEGGSYRVWSDTQDL
VLDGSKSYDPNLEDGDQTPLSFHWACVASTQSETGGCALTFGPRGSSVVTVPRERLQAGV
EYTFNLTVWKAGRKEEATNQTVLIRRGRVPLVSLECVSCKAQAVYAVSRSSYVYLEGRCD
NCSGGSQRGRWAARTFSNETLVLDETTTSTGSSGMRLVVRRGVLRDGEGYTFTLTVLGRS
GEEEGCASIRLSANRPPRGGSCRLFPLDAVHALTTKVHFECTGWQDAEDAGAPLVFALLL
RRCRQGHCEEFCVYRGSLSAYGAVLPPGFAPHFQVDLAVVVQDQLGAAVVALNRSLAITL
PELPSDLPGGPLDLTTWLHSLTESMLPRLLRQADPQHVIEYSLALITVLNEASAGHEQAL
ASSAESDPRRQLQAQIRKNVTEILVSLRVNTVDDIRQIAAALAQCTVSSRELVCRSCLKK
TLHKLEGMMHILQAETAEGTGTPDSWPLGRSASCFIGWPGPGPRAAGNKATVSAASNREL
SSPPAPGCREGATGLRERPPGCASCAGQPSNAVLVPLEHYLSREPEPYLAVYLHSGPQPN
EHNCSASRRITPEALAGGDHRPYTFFIAPGSRDPGGTYYLNLTSHFRWSALEVTVGLYTS
LCQYFSEKDMMWRTEGLVPLEETSPSQAVCLTRHLTAFGASLFVPPSHVRFIFPEPASGV
NYVVLLTCSVCLVTYVVMAVILRKLDQLDVSRVRVIPFCGKGGRFKYEILVKTGWGRGSG
TTAHVGIMLYGAEGRSGHRHLDGDRAFRRNSLDVFQIATPHSLGSVRKIRVWHDNKGLSP
AWFLQHVIVRDLQTACSTFFLVNDWLSVETEANGGLVEASKGLAAGDAAVRRFRRLLVAE
LQRGFFDKHLWLSLWDRPPRSRFTRVQRATCCVLLVCLFLGANAVWYGVVGDAAYSAGPV
SGLIPLSADTVAVGLVSSVVVYPVYLVILFLFRMSRSKVAGGPSPTPAGQPVLDIDSYLD
SSVLDSSFLAFPGLRAEAFAGQMKSDLFLDDCKSLVCWPSSEGTLNWPDLLSDPSIVGST
LQRLARGRLGPEEDGLSLLSPSSPAKSFSASDEDLIRRIVAEGAGSLAPARDAQVETDLL
AGLLAHGLSLLLVAVAVGVSGWVGAGFSPGVGVMWLLSSSSSFLASFFGWEPLKVLLEAL
YFSLVAKRLHPDEDDTLVESPAVTPVSERVPRVRPPHGFALFLAKEEARKVKKLHGMLRS
FLVYMLFLLVTLLANHGDASCHSHAYRLQSAIKQELGSQAFLAITRSEEFWPWMSHVLLP
YIHGNQSSPELGPPRLRQVRLQEALCPDPARPGVPMCAAAAGSFSTGDYGIGWGSAVHNG
SETWAYSAPDLLGVWSWGYCAVYDSGGYVQELGLSLEESRAQLGFLQLHNWIDNRCSRST
CPRLSTLRRFRRAHGGPHAALLRSPAPPRSTPPPRRFSLQP
NT seq
9126 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcgggaggattggcacctcccgcgtgcccagctgctctcctctcacgttcccc
gagctgcacggagaactgaaacccgtgtctacctataaactacccacggtagcagagacg
tggaaacagccccggtgtctagccccggtcgagcagatccacggaatgtggtccatccac
acggtggagtaccactcagccatcaaaaggaacaaagcgctggcacctgcaacagcctgg
atgcgccttgaaaacatgttcggtgaaggaagccagactagagtccccgtgttgaatgat
ttcaccgggtatgggaccttggccagcagggtcctggggagcctgctggtgttttctgtg
ccctgtgggccaggctcggcccagaggcccaggccccctgccagcctcagttcagacatc
cgggggtccgtaccctgcccagcccatcccgggaaccacctggcagggtcaggcctctcc
agtcttggaggtcctgggacctacacgagcagagatgtgtcccacaacctgctccgggca
ctggacgctgggctcctggcgaacctctccgcactgaccgagctggatataagtaacaac
aagatttctactttagaagaaggattatttgctaatttatttaatttaagtgaaatgggc
cccaccctccttgataaagtcttccctgcctccccaggggccgccctggtggggcctcca
ggacccctggcctctggccagccagcagccttccatatcactgcctccctgcccgtcagc
tccacacactgggactttggtgacggctcccctaaggtggatgttgctggtcctgccacc
actcaccgctattccctgcccggccactaccaggtgacagccgtgctggccctgggggct
ggctcagcccagctaggggccaaggtgcaagtggaggcggcccctgctgccctggagctc
gagtgtccagtctcggtactcagtgatgagaccctcaagcttggcgtccgaaatcgtggt
ggctccggcctggaagccacctacagtattgtgtctttgggcgaggagccaggtcgagtg
gtgcatccgctctgcccctcggacaccgtgatcttccccggtaatgggcactgctaccgc
ctggtggccgagaaggccgcctggctgcaggcacaggagcagtgccgggcctgggccggg
gccgccttggccatggtggacagtcccgccgtccagcacttcctggtctcccaggtcacc
aggagcctggacgtgtggattggcttctcagctgtggagggggctgaggcgggccctgct
gtgcggggtgaggccttcagcctggagagctgccagaactggctgcctggggagccgcac
cggcaagtggctcagtcctgggtctggccctgcctggggcccgcggacactctcttcctt
ggcccgcgaccagcaccttactgtacacgcactgtcccaggtcctgtgtgggatgcggag
aacttcctcgtgggagcgccccctggagacctgcagggacccttgagtcccctggcacag
caggaggccctgtcagccccccaggagcctgtcgagagacgcgtaggaagcccactgccg
tgcaaaggggagagccctgtctgggggctcngcctgagtagagaagccttcctcgtcgct
gccgagttcggcactcaggagctccaccgacccgcccagctgcggctgcaggtgttccgg
cccgagggaggagcaggggccccaggacatggcggggagccccagagggtgtccctggag
agccaggctctgccggtgcccgcgtgcaccccagagggacgctggtgcccccaaactggt
atccccctgtcaccggacaccctctgccggccccgggcctgtgccaacgcgtccacgtca
gggccagggccccctgggacctcctgtgtgctctggaaggagtttctgttctccgtgccg
gcaggccctcccacccagtactcagtccccttccagggccaggacggccccctgctcccc
ggtgacctcgtcaccttgcagcacgacgctggaccaggtgccctcctgcactgctcgccg
gcgctcggaccccctggccctgaggcgccgtacttgtccgccgtggcctcgtgtagggcg
gcctgccctgccccggtggctgccctggtgcccagctgtgctctcgaggccaacaccacc
ctgttctcggtgctggccctgcccggcctccgtgagggcgagcacacggtggaggtggtg
gtggagaacagcgccggccgggccaacctcagcctgcaggtgaaggccgaggagcccctc
tggggcctccgggccacacccagccccgaagcccgggtgctgcaaggcgtcctggtgagg
tacagccccatggtggaggccggctcagacgtggtcttccgctggactatagacgacaag
cagtcccttaccttccacaatgtgcccacacactgctacctgtccccacagctgacggcc
tccaaccacgtgagcaatgtcaccgtgaactataacgtcactgtggagcggatgaacagg
atgaggggcctctgggtgtctgcagtgccacccgtgttgccccccaatgccacgctggcg
ctggctgcccacgtgctggtggactcggctgtggaggtggcttttctgtggacctttggg
gacggggcccaggtgattggccagttcaagcctccgtacaatgagtccttcccggtgcca
gaccctgcagtcgcccaggtgctggtggcgcacagtgtcacacacacctacgccgtccca
ggtgagtacaacctgaccctgctggtgtccaacgccttcgagaacctgacgcggcgagtg
tctgtgagcgtgcgcgccaccctgcctgctgtggctgtgggccattttgggaggtgggtg
gaaagccgtgtcctggtggctggccagtctgtcacctttgccccacacccactgccctcc
cctgggggcatcctgtatacgtgggacttcggagatggctccccagctgtgacgcagcac
cggccggaggtcaaccacacatacagctcagggggcacgtaccgcgtccatctggaggtc
aacaacacggttagcagcgtggcggcatgtgtcggcatccgtgtctttgaggagctccgg
ggcctgagcgtgagcctcagcccgtccgtggagcagggcgcgcctgtgaccgtcagcgcc
gccctggagtcgggagacaacgtcacgtggacttttgacatgggggacggcacggtgctc
acgggccccgaggccacggtggagcacgtgtacttgcgggcacggaactgcacggtgact
gtgggagcgtccagccccgcgggccgcctggcgctgagcctgcccctgcaggtgtttgtc
ctggaggtgctgcggatcgagcctgcggcctgcatccctgtgcagcccctcgcccggctc
acggcccacgtccctggggaccccacccactacatctttgactggacgttcggggatggc
tcctccaacgccaccgtctcgggggacccgacggtgacgcacaacttcacacggagcggc
acgttccccttgacgctggtcctctcaagccacgtgaacaaggcccattacttcaccagc
gtctgcgtggagcccgagctgggcaacgtgaccctgtggcccgagaggcagtccgtgcgg
ctcggggacgaggcccgttgggtggctcgtgcctggcccccgttcctctaccgttacacc
tgggacttcggcactgaggatcccgcccgtgtcgggggccccgaggcactgcccgggccc
cgcttctcccgcagtttcccccgggccggggactacacgctgagcgtgcaggcggaaaac
cacgtgagccgggcccaggcgcaggtgcgcatcttggtgctagaggcggtgggggggctc
caggtgcccaactgctgtgagccgggcatccccacgggcacggagaggaacttcacggcc
cgcgtgcagcgggggtcccgcgtggcctacgcgtggtacttctccttgcaaaaggtccag
ggggactcgctggtcattctgtcaggccgcgacgtcacctacacccccgtggccgcgggg
ctgctggaaatccacgtgcgcgccttcaacgagctgggaggcgtgaaccgcacgctcgtg
gtcgaggtccaggacaccatccagcacgtggtgctgcgcagcggccgctgctttaccaac
cgttcggcccggttcgaggccgccacgagccctagcccccggcgtgtggcctatcgctgg
gacttcggggatggggccccggcggaggacacggaggagccctgggccgaacactcctac
ctgcagcccggggactaccggatggaggtgaatgcttccaacctggtgagcttcttcgtg
gcccaggccacggtcaccgtccacgtgctggcctgtagggagcccgaggtggacgtggcc
ctgcccccgcaggtgctgatgcggcgctcccagcgcaactacctggaagcccacgtcaac
ctccgcgactgcgtcacctaccagacggagtaccggtgggaggtgtaccgtgctgctggc
tgccatcggccggtgcgcgtggcccccgtggctctgcccagcgtggacatgagccggccc
cagctggtggtgccacggctggcgctgcctgtgggccactactgctttgtgttcctggtg
tcatttggggacaccccgctggcacggagcatccaagccaatgtgacagtggtccctgag
cgcctggtgcccatcatcgagggaggctcgtaccgtgtgtggtcagacactcaggacctg
gtgctggatgggagcaagtcctatgatcccaacctggaggacggtgaccagacgccactc
agcttccactgggcctgtgtggcctcaacgcagagtgagactggcgggtgcgctctgacc
tttgggccccggggcagcagcgtggtcaccgtcccccgggagcgcctgcaagctggtgtg
gagtacaccttcaacctgaccgtgtggaaggcaggccggaaggaggaggccacaaaccag
acggtgttgatccgcaggggtcgggtgccccttgtgtccttggagtgtgtgtcctgcaag
gcgcaggccgtgtacgcagtgagccgtagctcctatgtgtacctagagggccgctgtgac
aactgtagcgggggctcccagcgagggcgctgggcggcgcgtactttcagcaacgagacg
ctggtgctggacgagacgaccacgtcgacaggcagctcaggcatgcggctggtggtacgg
cgcggcgtgctgcgggacggcgagggttacacgttcacgctcacggtgctgggccgctcg
ggcgaggaagagggctgcgcctccatccgcctctccgccaaccggcccccgcgcggaggc
tcttgccgcctcttcccgctggacgccgtgcacgccctcaccaccaaggtgcatttcgag
tgcacaggctggcaggatgcggaagacgcaggcgccccactcgtgttcgccctgttgctc
cggcgctgtcgccagggccactgcgaagagttctgcgtctacaggggcagcctctctgcc
tacggagccgtgctgccgcctggttttgcaccacacttccaggtggacttggccgtggtc
gtgcaggaccagctaggcgccgctgtggttgctctcaataggtctctggccatcaccctg
cccgaactccctagtgacctgccaggtggccccctggacctcacgacttggctgcacagc
ctcacggagagcatgcttcccagactactgagacaggctgacccccagcacgtcatcgag
tactctctggccctcatcactgtgctcaacgaggccagcgcagggcacgagcaggcgctg
gcctcgtcagcagagtcggaccccaggcggcagctgcaagcccagatacgcaaaaacgtc
acagagattctggtctccctgcgggtcaacaccgtggatgacatccggcagattgccgcg
gcgctggcccagtgcacggtctccagcagggagctcgtgtgccgctcgtgtctgaagaag
acgctgcacaagctcgagggcatgatgcacatcctgcaggccgagaccgccgagggcacc
ggcacccccgactcgtggcctttaggaaggtctgcctcctgcttcataggctggccgggg
cctggccccagggcagcggggaacaaggcaacagtgagtgctgccagcaacagagagctc
tccagccccccagccccaggctgcagggagggcgccacagggctccgggagcgtccccca
gggtgtgcgagctgcgcggggcagccgtccaatgctgtccttgtgcccctagaacactac
ctgtcccgggagcccgagccctacctggctgtgtacctgcactcggggccgcagcccaac
gagcacaactgctcagccagcaggaggatcaccccggaggcgctggcgggcggggaccac
aggccctacacattcttcatcgccccagggagcagagacccaggcgggacttattacctg
aacttgaccagccacttccgttggtcggcactggaagtgaccgtgggcctgtacacatcc
ctgtgccagtacttcagcgagaaggacatgatgtggaggacagagggccttgtgcctttg
gaagagacgtcacccagccaggccgtctgcctcacccgccacctcactgccttcggggcc
agcctcttcgtgcctcccagccacgtgcggttcatctttccagaaccggcctcaggcgtg
aactacgtcgtcctgctgacctgttccgtgtgcctggtgacctatgtggtcatggccgtg
atcctgcgtaagctggaccagctggacgtcagccgtgtccgcgtgatccctttctgtggg
aaggggggccgcttcaagtacgagatcctggttaagactggctggggccggggctcagga
accacggcacacgtgggcatcatgctgtatggggctgagggccgcagcggccaccggcac
ctggatggggacagggccttccgccgcaacagcctggacgtgttccagatcgccacgccg
cacagcctgggcagcgtgcggaagatccgcgtgtggcacgacaacaaagggctcagcccc
gcctggttcctgcagcacgtcatcgtccgggacctgcagaccgcctgcagcaccttcttc
ctggtcaacgactggctgtcggtggagactgaggccaatggcggcctcgtggaagcaagt
aagggcctggctgcaggcgacgcggctgtgcggcggttccggcgcctcctggtggccgag
ctgcagcgtggcttttttgacaagcatctctggctctccctctgggaccggccaccccgg
agccgcttcacccgcgtccagcgggccacctgttgcgtcctcctcgtctgcctcttcctg
ggtgccaatgctgtgtggtacggggtcgtgggagacgccgcctacagcgcggggcccgtg
tccggtctgatcccgctgagtgccgacaccgttgccgtcggcctggtgtccagtgtggtg
gtctatcccgtctacctggtcattctgtttctcttccggatgtcccggagcaaggtggct
gggggcccgagccccacccccgcggggcagccggtcctggacatcgacagctacctggac
tcgtctgtgctggacagctccttcctggccttcccggggctccgcgctgaggcctttgcc
ggacaaatgaaaagtgacttatttttagatgattgcaaaagcctggtgtgctggccgtcc
agtgaaggcacgctgaattggccggacctgctgagtgacccatctatcgtgggcagcacc
ctgcagcggctggcacggggccgcctgggcccggaggaggacgggctctccctgctcagc
ccctcctcacctgccaagtccttctcagcttcggacgaggacctcatccggcggatcgtg
gctgaaggggccggcagcctggcccctgcccgggacgcacaagtagaaacggatctgctc
gctggcctcctggcccacggactcagcctgctcttggtggctgtggctgtgggggtctcc
ggctgggtgggtgccggcttctcccctggtgtgggtgtgatgtggctcctctcgagcagc
tccagcttcttggcctccttcttcggctgggagccgctcaaggtcctgctggaggccctg
tacttctccctggtggccaagcggctacaccccgacgaggatgacaccctggtggagagc
ccggctgtgacccctgtgagcgagcgtgtgccccgtgtgcggcccccacacggctttgcg
ctcttcctggcgaaggaagaggcccgaaaggtcaagaagctgcacgggatgctgaggagc
ttcctggtatacatgctcttcctgctggtgacgctgctggccaaccatggggacgcttcc
tgccacagccatgcctaccgcctgcagagtgccatcaaacaggagctcggcagccaggcc
ttcctggccatcacccggtctgaggagttttggccgtggatgtcccacgtcctgctcccc
tacatccatgggaaccagtccagcccagagttggggcccccgcgactgcggcaggtgcgg
ctgcaggaagcactctgcccagaccctgctcgcccgggcgtgcccatgtgcgcggcagcc
gcaggctccttcagcacaggcgactatggcatcggctggggcagtgctgtccacaacggc
tccgagacgtgggcctactctgcgccagacctgctgggggtctggtcctggggctactgc
gccgtgtacgacagcggaggctacgttcaggagctggggctgagcctggaagagagccgc
gcgcagctgggcttcctgcagctgcacaactggatcgacaacaggtgctcgcgctccacc
tgtccccgcctttccacactgcggcgcttccggcgggcacacgggggtccccacgcggcc
ctcctccggagccctgcccctccgcggtccactcccccaccccgccgcttttccctacag
ccttga
DBGET
integrated database retrieval system
