Panthera tigris altaica (Amur tiger): 102956788
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Entry
102956788 CDS
T02988
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg03082
ATP-dependent chromatin remodeling
ptg04714
Thermogenesis
ptg05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102956788 (SMARCC1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
102956788 (SMARCC1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
102956788 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptg03021
]
102956788 (SMARCC1)
03036 Chromosome and associated proteins [BR:
ptg03036
]
102956788 (SMARCC1)
Transcription machinery [BR:
ptg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102956788 (SMARCC1)
Chromosome and associated proteins [BR:
ptg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102956788 (SMARCC1)
PBAF complex
102956788 (SMARCC1)
GBAF(ncBAF) complex
102956788 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Chromo
DUF919
BRCT_2
SpeFL
Motif
Other DBs
NCBI-GeneID:
102956788
NCBI-ProteinID:
XP_015395849
LinkDB
All DBs
Position
Un
AA seq
1203 aa
AA seq
DB search
MNSKKPKRQRGRAVQVAPTAGARAPEAGKSWWCGWGHEGEVKCVPLEQLRVVVPDGCLQR
LRRLDVEGLRAREGRRRFPPFPWVPRPALDTLNGLPPRNFSPGLFSPAVAGDDRSSLHWL
TGRRKELGCSKTRRGPGWVAEEVRSLPRLAGEGGVKIPVFILQYVHADAPTNKTLAGLVV
QLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCHILGAAYKYKNEQGWRRFDLQNP
SRMDRNVEMFMNIEKTLVQSNCLTRPSIYLIPDIDLKLANKLKDIIKRHQGTFTDEKSKA
SHHIYPYPSSQEDEEWLRPVMRKDKQVLVHWGFYPDSYDTWVHSNDVDAEVEDPPIPEKP
WKVHARWILDTDVFNEWMNEEDYEVDENRKPVSFRQRISTKNEEPVRSPERRDRKASANA
RKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRSQKEEDEQEDLTKDMEDPTPVPNIEE
VVLPKNVNPKKDSENTPVKGGTVADLDEQDEETVTTGGKEDEDPSKGDQSRSLDPGEDNV
TEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNP
QEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDPESRPMAMGPPPTPHFNVLADT
PSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPIDLQNFGLRTDIYSKKTLAKSKGASAGRE
WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASLGPLA
YQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPLELVEAHVKKVQ
EAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEKMETDTDVQQPEKAENKGENETD
EGDKAQDGENEKHSEKEQDSEVSEDTKSEEKETEENKELTDTCKERESDLGKKKVEHEIS
EGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMD
REKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQQQHGQNPQQAHQHSGGPGLAPL
GAAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGPGSMIPGQPMPGRMIPTVAANIH
PPGSGPAPPGMPPMPGNILGPRVPLTAPNGMYAPPPQQPPPPPPPTDGVPPPPAPGPPAS
AAP
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgaaaaagcctaagcgacaaaggggaagagctgtccaggtggcgccaacagct
ggtgctagggcccccgaggcaggaaagagctggtggtgcggctggggccacgagggggaa
gtaaagtgtgtgccgctggagcagctccgggtggtggtcccagatggatgtttacaaagg
ctacggcgccttgatgtagaaggtctgagggcaagagaaggcagacgcagattcccaccc
ttcccgtgggttcctcggccagcactcgacaccctaaacgggcttccccctcggaacttc
tcgccaggtcttttctccccggctgtagcaggggatgacagaagctccctgcactggttg
acgggacgcaggaaggaacttggatgcagcaagacacgcagaggcccaggctgggtagcg
gaggaggtacgcagcctgcctcgactggcgggagaggggggcgtcaaaattcctgtcttt
atcttgcagtatgttcacgcagatgctcctaccaacaaaactctggctgggctagtggta
cagcttctccagttccaggaagatgcctttgggaagcatgtcaccaacccggccttcacc
aaacttccagcaaaatgtttcatggatttcaaagctggaggcaccttgtgtcacattctt
ggggctgcttacaagtataaaaatgaacagggatggcgtaggtttgatctacagaatcca
tctcgaatggatcgtaacgttgaaatgtttatgaatattgaaaaaacattggtgcagagc
aattgtctgaccagacccagcatctacctcattccagacattgatctgaagttggctaac
aaattgaaagatatcatcaaacgacatcaggggacatttactgatgagaagtcaaaggct
tcccaccacatttatccatatccttcctctcaagaggatgaagaatggttgagaccggtg
atgagaaaagataagcaggtgttagtgcactgggggttttacccagacagctatgatact
tgggtccatagtaatgatgttgatgcagaagttgaagatcccccaattccggaaaagcca
tggaaggttcatgcaagatggattttggatactgatgttttcaatgaatggatgaatgag
gaggattatgaggtggatgagaacaggaagcctgtgagttttcgtcagcgaatttcaaca
aagaatgaagagccagtcagaagtccagagagaagagataggaaagcatcagctaatgct
cgaaagaggaaacattcgccttcccctccacctccaacacccacagaatcccggaagaaa
agtggaaagaaaggccaagctagtctttatggcaagcgcagaagtcagaaagaggaagat
gagcaagaagatcttaccaaggacatggaagacccaacaccagtacccaacatagaggaa
gtggtacttccaaaaaatgtgaacccaaagaaagatagtgaaaatacacctgttaaagga
ggaactgtggcagatctagatgagcaggatgaagaaacagtcacaacaggaggaaaggaa
gatgaagatcctagcaaaggtgatcagagtcgttcacttgacccaggagaagataatgtg
acagagcagaccaatcacattattattcctagttatgcatcatggtttgattataactgt
attcacgtgattgaacggcgtgctcttcctgaatttttcaatgggaaaaacaaatccaag
actccagaaatatacttggcatatcgaaattttatgattgacacatatcgcctaaacccc
caagaatatttaaccagcactgcttgtcggcgaaacttgactggagatgtgtgtgctgtg
atgagggttcatgcctttttagagcagtgggggcttgtcaattatcaagtggatccagaa
agtcgacccatggcaatgggacctcctcctactcctcatttcaatgtattagctgatacc
ccttctgggcttgtgcctctacatcttcgatcacctcaggtccctgctgctcagcagatg
ttaaattttcctgagaagaacaaggaaaaaccaattgatttgcagaactttggtcttcgt
actgacatttactccaagaaaaccttagcaaagagtaaaggtgctagtgctggaagagaa
tggactgaacaggagacccttctgctcctggaggccctggagatgtacaaggatgattgg
aacaaagtgtcagagcatgtcggaagtcgtactcaggatgaatgcatcctccactttctg
aggcttcctattgaggacccgtaccttgagaattcggatgcctccctggggcccctagct
taccagcctgtccctttcagtcagtcaggaaacccagtcatgagcactgttgcttttttg
gcatccgtggtggaccctcgtgtggcatctgctgcagcaaaagcagctttggaggagttt
tctcgggtccgagaggaggtaccactggaattggttgaagctcacgtcaagaaagtacaa
gaagcagctcgagcctctgggaaagtggaccccacgtatggcctggagagcagttgcatt
gcaggcacgggacctgatgagccagagaagcttgaaggggctgaggaggaaaaaatggaa
acagataccgatgttcagcagcctgaaaaggcagaaaacaaaggggaaaacgaaacagat
gaaggtgataaagcacaagatggagaaaatgaaaaacatagtgagaaggagcaggacagt
gaagttagtgaggataccaaatcagaagaaaaggaaactgaagagaacaaggaactcact
gatacttgtaaagaaagagaaagcgatctcgggaagaagaaagtagaacatgaaatttcc
gaaggaaatgtggccacggccgcagcagctgctcttgcttcagctgcaaccaaagccaag
cacctggctgcagtggaagagagaaagatcaagtctctggtggccctgctggttgagaca
caaatgaagaaattggagatcaaactgcgacattttgaggagctggaaactatcatggac
agagagaaggaggctttagaacaacagaggcagcagttgcttactgaacgccagaacttc
cacatggaacagctgaaatacgctgaattgcgagcccgacagcaaatggaacagcagcag
catgggcagaaccctcagcaggcacaccagcactcaggaggacctggcctggcaccactc
ggagcagcggggcaccccggcatgatgcctcatcagcagcctcctccctaccctctcatg
caccaccagatgccaccacctcatccaccccagccaggtcagataccaggcccaggttcc
atgatccctgggcagcccatgccaggccgcatgattcccaccgttgcagccaacatccac
ccgcctgggagtggcccagctcctcccggtatgcctccaatgccaggaaacatcttagga
ccccgggtacccctcacggcacctaacggcatgtatgcccctccgccgcagcagccgcca
ccgcctccgccgcccacggatggagtccctccgcctcctgctccaggcccaccagcctcg
gccgccccctag
DBGET
integrated database retrieval system
