Panthera tigris altaica (Amur tiger): 102956822
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Entry
102956822 CDS
T02988
Symbol
SOX30
Name
(RefSeq) SRY-box 30
KO
K09271
transcription factor SOX15/30
Organism
ptg
Panthera tigris altaica (Amur tiger)
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptg03000
]
102956822 (SOX30)
Transcription factors [BR:
ptg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102956822 (SOX30)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
102956822
NCBI-ProteinID:
XP_007077656
LinkDB
All DBs
Position
Un
AA seq
676 aa
AA seq
DB search
METIYTAVSRWKIMEAWNRRSEGPPVKHGTYMYSGTSAGKYKAQLPIPRKRLTRLYPLEV
SGIEPHRSLGNTIVGLSRRGRARASREAKVEGPGPTLDCRRGGEKKGRLEAEEVMRDAAK
GGEGKNLVAIREGIIKTEEPERLREDCRLGTEPASNGLIHGSKEVILGQPSSAFGPHQQD
LRIPLTLHTVPPGARIQFQGPPPSELIRLTKVPLTPVPIKMQSLLEPSVKIETKDVPLTV
LPSDAGIPDTPFSKDRNGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNK
LSEEQKKPYYDEAQKIKEKHREEFPGWVYQPRPGKRKRFPLSVSNVFSGTTQNIMSTNPT
TIYPYRSPTYSVVIPSLQNTITQPVGDATPAIQLPTPAVQHPSPISLFQPTVSSTAQVAV
QAPSLPLRPVLPPQRFAGPSQTDTHRLHSGANRSVKRPTPVSLENTNRIPTSASTAHARF
ATSTIQPPKEYPSVSTCPRSAPIPQAPPIPHSHVYQASPLGHPATLFGTPPRFSFHHPYF
LPGPHYFPSSTCPYSRPPFGYGSFPSSMPECLGYYEDRYQKHEAMFSALNRDYPFRDYPD
ERTHSEDSRSCESVDGTSYYNSHSHSGEEYLNPMPQLDIGALENVFTAPTSTPSSIQQVN
VTDSDEEDEEKVLRNL
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggagactatttacacagcagtatccaggtggaagattatggaagcttggaatagaaga
tctgaagggccccccgtgaagcacgggacttacatgtattctggcacgtcagccggcaag
tacaaggcccagctccccatcccgcgtaagagactcactcgactttatcccctggaggtc
agtggcatagaaccgcaccgttccctgggcaacaccattgtcgggctctccaggcggggg
agggccagggcctccagggaggccaaggtggaaggccccgggccaaccctcgactgccgc
cgggggggcgagaagaagggcagattggaagcggaggaggtcatgagggatgcagcgaaa
ggcggggagggtaaaaacctggtggccatcagagaaggcatcatcaaaacggaggaaccc
gagagactccgcgaggactgcaggctgggcactgagcccgcatccaatggcctgatccat
ggcagcaaggaggtcatcctgggccagccatccagtgcctttgggccacaccagcaagac
ctcaggatccctttgactctacacacagtcccccctggggcccggatccagtttcaggga
cctccaccttcagagttgatacggttgaccaaggtccccttgacaccggtgcctattaaa
atgcaatctttactggagccttctgtaaaaattgaaactaaagatgtcccgctcaccgtg
cttccctcagatgcaggaataccagatactcccttcagtaaggacagaaatggtcatgtg
aagcgacccatgaatgcatttatggtttgggcaaggattcaccggccagcactagccaaa
gctaacccagcagccaacaacgcagaaatcagtgtccagcttgggttagaatggaacaaa
cttagcgaagaacaaaagaaaccctattatgatgaagcacaaaagattaaagaaaaacac
agagaggaatttcctggttgggtttatcaacctcgtccagggaagcgaaaacgcttccct
ttaagtgtttccaatgtattttctggtaccacacagaatatcatgtctacaaatcctaca
acaatatatccttatcgctcacctacctactctgtggtaattcccagcctacagaatacc
atcactcaaccagttggtgacgccacacctgccatccagctgcccacacctgcagtccag
cacccaagccctatctcacttttccagcccaccgtctccagtactgcccaggtggctgtc
caggctccaagtctgcccctccgaccggtactcccaccccagcgcttcgctgggccctcc
cagacagacactcatcggctacattctggagccaatcgctctgtgaagagacccactcct
gtctctctggagaacaccaacaggattccaacaagtgcaagtactgcccatgccagattt
gcaacctcaaccatccagcctcccaaggagtatcctagcgtttccacttgtcccagaagt
gctccaatcccccaggctcctcctattccacactcacatgtctaccaggcttctcccctt
ggccatccagccacattgtttgggacaccaccgcgattctcttttcatcacccttacttc
ctacctggacctcactacttcccatcaagcacgtgcccttatagtcggcctccctttggc
tatggaagttttccaagttcaatgccagaatgccttggttattatgaagacaggtaccaa
aaacacgaggctatgttttcagctttaaatagagactatccttttagagactacccagat
gaacgtacacacagtgaagattctcggagttgtgagagcgtggatgggacctcttactat
aacagtcatagccacagtggggaagaatacttaaatcctatgcctcagctggacattgga
gccttggagaacgtcttcacagccccaacgtcaactccctctagcatccagcaagtcaat
gtcactgacagtgatgaggaggatgaagaaaaagtgctcaggaatttataa
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