Panthera tigris altaica (Amur tiger): 102958110
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Entry
102958110 CDS
T02988
Symbol
SMC1A
Name
(RefSeq) structural maintenance of chromosomes 1A
KO
K06636
structural maintenance of chromosome 1
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg04110
Cell cycle
ptg04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102958110 (SMC1A)
04114 Oocyte meiosis
102958110 (SMC1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptg03036
]
102958110 (SMC1A)
Chromosome and associated proteins [BR:
ptg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
102958110 (SMC1A)
Meiosis-specific proteins
Cohesin complex and associated proteins
102958110 (SMC1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_hinge
SMC_N
AAA_23
Mce4_CUP1
Motif
Other DBs
NCBI-GeneID:
102958110
NCBI-ProteinID:
XP_015396947
LinkDB
All DBs
Position
Un
AA seq
1210 aa
AA seq
DB search
MFPDIVCVPLRGKSNLMDAISFVLGEKTSNLRVKTLRDLIHGAPVGKPAANRAFVSMVYS
EEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEELEKLGILIKARNFLVFQGAVESIAM
KNPKERTALFEEISRSGELAQEYDKRKKEMVKAEEDTQFNYHRKKNIAAERKEAKQEKEE
ADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKDKKRMDKVEDELKE
KKKELGKMMREQQQIEKEIKEKDSELNQNGPQYIKAKENTSHKIKKLEAAKKSLQNAQKH
YKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVKKYHRLKEEASKR
AATLAQELEKVHPDQKDDQDPAXXXEERKKVETEAKIKQKLREIEENQKRIEKLEEYITT
SKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQVMEQLGDARIDRQESSRQQRKAEIM
ESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMDAIIVDSEKTGRDCIQYIKEQR
GEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRYEPPHIKKALQYACGNALVCDNVED
ARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLKAKARRWDEKAVDKLKEKKERLTEE
LKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLEQTKTRHLALNLQEKSKLESELANF
GPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEFCREIGVRNIREFEEEKVKRQNEIA
KKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQTVKKDENEIEKLKKEEQRHMKIID
ETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGGANKEMTHLQKEVTAIETKLEQKRS
DRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGEDSVSGSQRTSSIYAREALIEIDYG
DLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRIAAPNMKAMEKLESVRDKFQETSDE
FEAARKRAKKAKQAFEQIKKERFDRFNSCFESVATNIDEIYKALSRNSSAQVGWSPLPGX
PLPSCCPSLYASCPHPHLAADPDPDSDPSAFSLALPLLFAIHSHKPAPFFVLDEIDAALD
NTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESLIGVYPEQGDCVISKVLTFDLTKY
PDANPNPNEQ
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgtttccagatattgtctgtgtccccctgagaggtaagtcaaatctcatggatgcgatc
agctttgtattgggtgagaaaaccagcaacctgcgagtaaagaccctgagggacctgatc
catggagctcctgtgggcaagccagctgccaatcgggcctttgtcagcatggtctactct
gaggagggtgctgaggaccgcacctttgcccgtgtcattgttgggggttcttctgagtac
aagatcaacaacaaagtggttcagctacatgagtacagtgaggaattagagaagttgggc
attctcatcaaagctcgtaacttcctcgtcttccagggtgctgtggaatctattgccatg
aagaatcccaaagagaggacagctctatttgaagagataagtcgctctggggagctggcc
caggagtatgacaagcgaaagaaggaaatggtgaaggctgaagaggacacacagtttaat
taccatcgcaaaaaaaacattgcggccgaacgcaaggaagccaaacaggagaaagaagag
gctgaccgctaccagcgcctgaaggatgaggtggtgcgagctcaggtgcagctgcagctc
tttaagctttatcacaatgaagtggagattgagaagctcaataaggaactggcctctaag
aacaaggagatcgagaaggacaagaagcgtatggacaaggtagaggatgagctgaaggag
aagaagaaggagctgggcaaaatgatgcgggagcagcagcagattgagaaggagatcaag
gagaaggactcagagctgaaccagaatgggcctcagtacatcaaagccaaggagaatacc
tcccacaaaatcaagaagctggaagcagccaagaagtccctacagaatgctcagaagcat
tacaagaagcgtaaaggtgacatggatgagctggaaaaggagatgctgtcagtagagaaa
gcccggcaggagtttgaggaacggatggaagaggagagtcagagtcagggcagagactta
accttggaggagaatcaggtaaagaaataccaccggttgaaagaagaagccagcaagaga
gcggctacgttggcccaggagctggagaaggtccatccagatcagaaagacgaccaggac
ccggcnnnnnnnnnngaagagcggaagaaagtagagacagaggccaagatcaagcaaaag
ctgcgggagattgaagagaatcagaaacggattgagaaactagaggaatacattaccact
agcaagcagtccctagaggagcagaagaagttagagggggagctgacagaggaggtggag
atggccaaacggcgtattgatgagatcaataaggagctgaaccaggtgatggagcagcta
ggtgatgcccgtattgaccgccaggagagcagccgccaacagcgaaaggcagagattatg
gaaagcatcaagcgcttgtaccctggctctgtgtatggacgcctcattgacctctgtcag
cccacacaaaagaagtaccagattgccgtgaccaaggttttgggcaagaacatggatgcc
attatcgtggactctgagaagacaggccgggactgtattcagtatatcaaggaacagcgt
ggggagcctgagaccttcttgcctcttgactacttggaggtgaaacctacagatgagaag
ctccgggaactgaagggggccaagctggtgattgacgtaattcgctatgagccaccccac
atcaaaaaggccctgcaatatgcttgtggcaacgcccttgtgtgtgacaatgtggaggat
gcccgccgcattgcctttggcggccaccagcgtcacaagacggtggcactggatgggacc
ctgttccagaagtcaggggtgatctctggtggagccagtgacttgaaagccaaggctcgg
cgctgggatgagaaagcggtagataagttgaaagagaagaaggagcggttgacagaggag
ctgaaagagcagatgaaggcaaagcggaaagaggcagagctacgtcaggtgcagtctcag
gcccatggactacagatgcggctcaagtactcgcagagtgacctggaacagactaagaca
agacatctagccctgaatctgcaggaaaagtccaagctggagagtgagctagccaacttt
gggcctcgcattaatgatatcaagaggatcatccagagccgagagagggaaatgaaagac
ttgaaggagaagatgaaccaggtagaggatgaggtatttgaagagttttgtcgcgagatt
ggtgtgcgcaacatccgagagtttgaggaagagaaggtgaagcggcagaacgaaattgcc
aagaagcgtttggagtttgagaatcagaagactcgcttgggcatccagttggattttgaa
aagaaccaactgaaagaggaccaggataaagtgcacatgtgggagcagacagtgaaaaag
gatgaaaatgagatagaaaagctcaagaaggaggagcaaagacacatgaagatcatagat
gagaccatggcccagctacaagacctgaagaatcagcacctggccaagaagtcggaggtg
aatgataagaatcatgagatggaggagattcgtaagaaactggggggcgccaacaaggaa
atgacccacttacagaaggaggtaacagccattgagaccaagcttgaacagaaacgcagt
gaccgccacaacctgctacaggcctgcaagatgcaggacatcaagttgccactgtctaaa
ggcactatggacgacattagtcaggaagagggaagctcccagggggaggattcagtgagt
ggttctcagcgaacttccagtatctatgcacgagaggccctcatcgagattgactacggt
gacctgtgtgaggatctgaaggatgcccaggccgaggaggagatcaaacaggagatgaat
acactgcagcagaagctcaatgagcagcagagtgtactccagcgtattgctgcccctaac
atgaaagccatggaaaagctggaaagtgtccgagacaagttccaggagacctcagatgaa
tttgaggcagcccgaaagcgagccaagaaagccaagcaggcattcgaacagatcaagaag
gagcgctttgaccgcttcaattcttgttttgaatccgtggccaccaacattgatgagatc
tacaaggccctatcccgcaacagcagtgcccaggtaggctggagccccttacccggctag
cccctaccatcctgttgcccttccctttatgcatcctgtccccatcctcatttagctgca
gacccagacccagattctgatccatctgccttctccctagctctgcccttgctctttgcc
atccacagccacaagccagcccccttcttcgtcctggatgagatcgatgctgccttggat
aacaccaacattggcaaggtggcaaattacatcaaggagcagtcgacttgcaacttccag
gccatcgtcatctctctcaaggaggagttctacaccaaggctgagagcctcattggagtc
taccccgagcaaggggactgtgtgatcagcaaagtcctgaccttcgacctcaccaagtac
ccagatgccaaccccaaccccaatgagcagtag
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