KEGG   Panthera tigris altaica (Amur tiger): 102958513
Entry
102958513         CDS       T02988                                 
Symbol
YBX1
Name
(RefSeq) Y-box binding protein 1
  KO
K09276  Y-box-binding protein 1
Organism
ptg  Panthera tigris altaica (Amur tiger)
Brite
KEGG Orthology (KO) [BR:ptg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ptg03000]
    102958513 (YBX1)
   03019 Messenger RNA biogenesis [BR:ptg03019]
    102958513 (YBX1)
   03041 Spliceosome [BR:ptg03041]
    102958513 (YBX1)
Transcription factors [BR:ptg03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   Cold-shock domain factors, YB-1/DbpB-like
    102958513 (YBX1)
Messenger RNA biogenesis [BR:ptg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Other mRNA localization factors
     102958513 (YBX1)
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     102958513 (YBX1)
Spliceosome [BR:ptg03041]
 Common components
  Common spliceosomal components
   General mRNP proteins
    102958513 (YBX1)
SSDB
Motif
Pfam: CSD OB_RNB S1CSD-TOTE-2
Other DBs
NCBI-GeneID: 102958513
NCBI-ProteinID: XP_015390898
LinkDB
Position
Un
AA seq 301 aa
MAAAEAGTVVERTSGNRAFFVFVCVCVCFFPPATKVLGTVKWFNVRNGYGFINRNDTKED
VFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADRN
HYRRYPRRRGPPRNYQQNYQNSESGEKNEGSESAPEGQAQQRRPYRRRRFPPYYMRRPYG
RRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEED
KENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDGKETKAADPPAENSSAPEAEQSGA
E
NT seq 906 nt   +upstreamnt  +downstreamnt
atggcggcggcggaggcaggaacggttgtagaaaggacgtctggtaatcgtgcgtttttt
gtttttgtgtgtgtgtgtgtgtgttttttccctccagcaacgaaggttttgggaacagta
aaatggttcaatgtaagaaacggatatggtttcatcaacaggaatgacaccaaggaagat
gtatttgtacaccagactgccataaagaagaataaccccaggaagtaccttcgcagtgta
ggagatggagagactgtggagtttgatgttgttgaaggagaaaagggtgcggaggcagca
aatgttacaggccctggtggagttccagtgcaaggcagtaaatatgcagcagaccgtaac
cattatagacgctatccacgtcgcaggggtcctccacgcaattaccagcagaactaccag
aatagtgagagtggggaaaagaacgagggatcggagagtgctcccgaaggccaggcccaa
cagcgccggccctaccgcaggcgacggttcccaccttactacatgcggagaccctatggg
cgtcgaccacagtattccaaccctcctgtgcagggagaagtgatggaaggtgctgacaac
cagggtgcaggagaacaaggtagaccagtgagacagaatatgtatcggggttatagacca
cgattccgcaggggtcctcctcgccaaagacagcctagagaggacggcaatgaagaagat
aaggaaaatcaaggagatgagacccaaggtcagcagccacctcaacgtcggtaccgccgt
aacttcaattaccgacgcagacgcccagaaaaccctaaaccacaagatggcaaagagaca
aaagcagccgatccaccagctgagaattcgtccgctcccgaggctgagcagagcggggct
gagtaa

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