KEGG   Panthera tigris altaica (Amur tiger): 102958706
Entry
102958706         CDS       T02988                                 
Symbol
VCP
Name
(RefSeq) valosin containing protein
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
ptg  Panthera tigris altaica (Amur tiger)
Pathway
ptg04137  Mitophagy - animal
ptg04141  Protein processing in endoplasmic reticulum
ptg05014  Amyotrophic lateral sclerosis
ptg05022  Pathways of neurodegeneration - multiple diseases
ptg05134  Legionellosis
Brite
KEGG Orthology (KO) [BR:ptg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    102958706 (VCP)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    102958706 (VCP)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05134 Legionellosis
    102958706 (VCP)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    102958706 (VCP)
   05022 Pathways of neurodegeneration - multiple diseases
    102958706 (VCP)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptg03019]
    102958706 (VCP)
   03009 Ribosome biogenesis [BR:ptg03009]
    102958706 (VCP)
   04131 Membrane trafficking [BR:ptg04131]
    102958706 (VCP)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ptg04147]
    102958706 (VCP)
Messenger RNA biogenesis [BR:ptg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     102958706 (VCP)
Ribosome biogenesis [BR:ptg03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    102958706 (VCP)
Membrane trafficking [BR:ptg04131]
 SNARE
  SNARE associated proteins
   Others
    102958706 (VCP)
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    102958706 (VCP)
Exosome [BR:ptg04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102958706 (VCP)
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_16 CDC48_2 AAA_5 AAA_33 AAA_2 TIP49 AAA_22 AAA_14 NPHP3_N RNA_helicase Vps4_C AAA_28 nSTAND3 Parvo_NS1 Mg_chelatase AAA_17 ATPase_2 IstB_IS21 AAA_18 AAA_7 ATPase DUF815 ABC_tran AAA_24 NB-ARC TsaE ResIII NACHT Sigma54_activat Viral_helicase1 SLFN-g3_helicase KAP_NTPase Zot DUF3944
Other DBs
NCBI-GeneID: 102958706
NCBI-ProteinID: XP_015390504
UniProt: A0A8C9JTJ4
LinkDB
Position
Un
AA seq 761 aa
MDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQPC
PDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKV
VETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLR
HPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESN
LRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMA
ATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHG
HVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALR
ETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKT
LLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKA
RGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI
PLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIES
EIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQS
RGFGSFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDLYG
NT seq 2286 nt   +upstreamnt  +downstreamnt
atggatgagctgcagttgttccgaggtgacacagtgttgctgaaaggaaagaagaggcgg
gaagctgtgtgcattgtgctttctgatgacacatgttccgatgagaagattcgaatgaat
agagttgttcggaataaccttcgtgtacatctaggggatgtcatcagcatccagccgtgc
cctgatgtgaagtacggcaaacgtatccatgtgctacccattgatgacacagtggaaggc
atcactggcaatctcttcgaggtctaccttaagccatacttcctggaagcttatcgaccc
atccggaaaggagatattttccttgtccggggtggaatgcgtgctgtagagttcaaagta
gtggagacagatcccagcccttactgcattgttgctccagacacagtgatccactgtgaa
ggggagcctatcaaacgagaggatgaggaagagtccttgaatgaagtaggctatgatgac
attggtggctgcaggaaacagctagctcagataaaggagatggtggagctacccctgaga
catcctgccctttttaaggcaattggtgttaagcctcctcggggaatcctgctctatgga
cctcctgggactgggaagaccctaattgccagagctgtggcaaatgagactggagccttc
ttcttcttgatcaatggtcccgagatcatgagcaagttggctggtgagtctgagagcaac
cttcgtaaagcctttgaggaggctgagaagaatgctcccgccatcatcttcattgatgag
ctagatgccattgctcccaaaagagagaaaacccatggggaggtggagcggcgtattgta
tcacagttgttgactctcatggatggcctaaagcagagagcacatgtgatcgtcatggca
gcaaccaacagacccaatagcattgacccagcccttcgacgatttggtcgctttgacagg
gaggtagatattggaatccctgatgctacaggacgcttggaaattcttcagatccatacc
aagaacatgaaattggcagatgatgtggacctggaacaggtagccaatgagacccacggg
catgtgggcgctgacttagcagccttgtgctctgaggctgctcttcaggctatccgcaag
aaaatggatctcattgacctagaggatgagaccattgatgctgaagtcatgaactctctg
gcagttactatggatgacttccggtgggccctgagccagagcaacccatcagcactgcgg
gaaactgtggtggaggtaccacaggtaacctgggaggatattgggggcctggaggatgtc
aaacgtgaacttcaggagctggtccagtatcctgtggagcacccagacaaattcctcaaa
tttggcatgacaccctccaagggagtactcttctatggacctcctggctgtgggaaaacc
ttgctggccaaagccattgctaatgagtgccaggccaactttatctccatcaagggtcct
gagctgctcaccatgtggtttggggagtctgaagccaatgtcagggaaatctttgacaag
gcccgccaagctgccccctgcgtactattctttgatgagctggattcaattgccaaggct
cgtggtggtaacattggagatggtggtggagctgcagaccgagtcatcaaccagatcctg
acagaaatggatggcatgtctacaaaaaagaatgtgtttattattggggctaccaataga
cctgacatcattgatcctgctattctgcgacctggccgtcttgatcagctcatctatatt
ccacttcctgatgagaagtcccgtgttgccatcctcaaggccaacctgcgcaagtcccca
gttgccaaggatgtagatttggagtttctggccaagatgactaatggcttctctggagct
gacctgacagagatttgccaacgtgcttgcaagctggccatccgtgaatccatcgagagt
gagattaggcgagaacgggagaggcagaccaacccatctgccatggaggtagaagaagat
gatccagtgcctgagattcgccgagatcactttgaggaagccatgcgctttgctcgccgt
tctgttagtgacaatgacatccgaaagtatgagatgtttgctcagacccttcagcagagt
cggggctttggcagcttcagattcccttcaggaaaccagggtggagctggccccagtcag
ggcagtggaggcggcacaggtggcagcgtgtacacagaagacaatgatgatgacctgtat
ggctaa

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