Panthera tigris altaica (Amur tiger): 102959212
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Entry
102959212 CDS
T02988
Symbol
SRRM1
Name
(RefSeq) serine and arginine repetitive matrix 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg03013
Nucleocytoplasmic transport
ptg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102959212 (SRRM1)
03015 mRNA surveillance pathway
102959212 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptg03019
]
102959212 (SRRM1)
03041 Spliceosome [BR:
ptg03041
]
102959212 (SRRM1)
Messenger RNA biogenesis [BR:
ptg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102959212 (SRRM1)
Spliceosome [BR:
ptg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
102959212 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
102959212
NCBI-ProteinID:
XP_007083729
LinkDB
All DBs
Position
Un
AA seq
877 aa
AA seq
DB search
MSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAR
EFMGELWPLLLSAQENIAGIPSAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEK
ESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEK
TPELPEPSVKVKEPSVQEATSTSDILKVPKPEPVPEPKEPSPEKNSKKEKEKEKTRPRSR
SRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHR
RSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRH
RPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSVTKHKGTEKRESPSPAPKPRKVE
LSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRR
RHSPSRSASPSPRKRQKETSPRMQMGKRWQSPMTKSGRRRRPPPPPPTRRRRSPSPAPPP
RRRRSPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASP
SPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREPRSPQPNKRHSPSPR
PRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKTKKAASPSPQSVRRV
SSSRSVSGSPEPAVKKPPAPQSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPARNSDPEGG
GKKKKKKKDKKHKKDKKHKKHKKHKKEKAVAAAAAAAVTPAAIAAPTTTSAQEEPEAEPE
PKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPQS
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagtaaatttggaggttataaagccttggataacaaaacgagtaacggaaatc
cttgggtttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaat
ccagactccaaaatgatgcaaatcaacctgactgggtttttgaatggaaaaaatgctaga
gaatttatgggagaactgtggcccctgctcttaagtgcacaagaaaacatcgctggaatc
ccttctgcttttctagaactgaagaaagaagaaataaaacaaagacaaattgaacaagaa
aagttggcatctatgaaaaagcaagatgaagacaaggataagagggataaggaagaaaaa
gaaagcagcagagaaaaaagggagaggtctcggagcccaagaagacgcaaatccagatct
ccttcccctagaagacgatcttcccctgtcaggagagagagaaagcgcagtcattctcgg
tctccccgccacagaaccaagagccggagtccttcccctgctccagaaaagaaggaaaaa
actccagagctcccagaaccatcagtgaaagtaaaagaaccttcagtacaagaggccact
tctactagtgacatcctgaaagttcccaaacctgaacctgtaccagagcctaaagaacct
tctccggagaaaaattccaaaaaagaaaaggagaaggagaagacccgaccaagatctcgg
tcacgttccaaatcaagatcccggacacggtctcgctctccttctcatactcgacctaga
cggcgtcatagatcccgatcaagatcatactccccgagaaggcggccaagcccgagaagg
cggccatctcctcgaagaagaactccaccaagacgaatgccacctccacccaggcataga
agaagtagatctccagtgagacgaagaaggcgttcatcagcgtccttgtctggaagtagt
tcgtcatcttcttcgtctcgttcccggtcaccgccaaagaagcctcctaagaggacatcc
agcccccctcggaaaactcgtaggttatctccttcagcaagtcctccgaggcgaaggcat
aggccatcacctccagcaactccaccgccaaaaactcgtcattccccaacaccccagcag
tcaaaccgtacaagaaaaagtcgggtttctgtctctccagggagaacttcagtgacaaaa
cacaaaggtactgagaaaagagagtccccttcaccagcacctaagcctagaaaagtagag
ttatctgaatcggaagaagataaaggtggcaaaatggctgcagcagattctgtgcagcag
agacgtcagtacagacgacagaaccagcagtcttcatctgattctggctcctcttcttcc
tcagaagatgagcgacccaaaaggtcccatgtgaagaatggtgaggtaggcaggcggcgg
agacattccccttcccggagtgcctctccatcacctcgaaagcgccagaaagagacttcc
cctcggatgcaaatgggaaagcgatggcaatcgccaatgactaaaagtggtagacggagg
aggcccccccccccgccacccaccagaaggcgccgttctccttctcctgcccctcctcct
cgaaggcgcaggtctcccacaccaccacctcgacgaaggactccttctcctcccccccgg
cgccgctcaccttccccaagaagatactctcctccaatacagaggagatactctccttct
ccgcctccaaagagaagaacggcttctccacctccccctcctaaacgtagggcatcgcca
tctccaccaccaaagcgccgggtctcccattctccacctcccaaacaaagaagctccccg
gtcaccaagagacgttcgccttcgttatcatcaaagcataggaaagggtcttccccgagc
cgatctacccgggagccccggtcgccacaaccaaacaaacggcattcgccctcaccacgg
cctcgagctcctcagacctcctcaagtcctccacctgttcgaagaggagcatcatcgtca
ccccaaagaaggcagtccccatctccaagtactaggcccattaggagagtctccaggact
ccggaacccaaaaagacaaagaaggctgcctcaccaagccctcagtctgtaaggagggtt
tcatcctcccgatctgtctcaggatctcctgagccggcagttaaaaaacccccagcacct
cagtctcctgtccagtctcagtcaccctctaccaactggtcaccagcggtaccggtcaaa
aaggctaaaagcccaacaccaagcccatctccggcaaggaactcagaccccgaaggaggt
ggaaagaaaaagaagaaaaagaaggacaagaaacacaaaaaggataagaagcacaagaag
cacaaaaaacacaagaaggaaaaggccgtggctgcagccgctgcggctgctgtaacccct
gcagccatcgctgctcccacaaccacatcagcacaggaggaaccagaagcggagcccgag
cctaagaaggagaccgaaagcgagcccgaagacaacctcgatgacttagaaaagcacctg
cgtgaaaaggcgctgaggtcgatgcggaaggctcaagtgtccccacagtcttag
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