Panthera tigris altaica (Amur tiger): 102959273
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Entry
102959273 CDS
T02988
Symbol
CDC40
Name
(RefSeq) cell division cycle 40
KO
K12816
pre-mRNA-processing factor 17
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102959273 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptg03041
]
102959273 (CDC40)
Spliceosome [BR:
ptg03041
]
Complex C
Other components
Step II factors
102959273 (CDC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
EIF3I
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_NWD2_C
WD_LRWD1
WDR54
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
102959273
NCBI-ProteinID:
XP_007078792
UniProt:
A0A8C9M2P5
LinkDB
All DBs
Position
Un
AA seq
579 aa
AA seq
DB search
MSAAIASLAASYGSGSGSESDSDSEGGRCSLPASDSLMHLTKSASAKPSLAVAVDSAPEV
AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI
NDFMFEQQRRTFATYGYALDPSLDNHQVSTKYIGSVEEAEKNQGLTVFETGQKKIEKRKK
FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI
LHVKEMYDYQGRSYLHIPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS
GHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD
TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA
VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS
MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTT
KLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgcgattgcatctttggctgcgtcctatggttcgggttcagggtccgaatcg
gactcggacagtgagggtggacggtgttcgctgccagcttccgactccctcatgcacttg
actaaatcagcttcggccaagccgtctctggcagtggcggtggactcggctccggaggtg
gcagttaaggaagatttggagaccggagttcaccttgaccctgcagtcaaagaggttcag
tataatcctacctatgagaccatgtttgctcctgagtttggaccagaaaatccctttagg
acacagcagatggctgcccctagaaatatgctttctggatatgctgaaccagctcatatc
aatgactttatgtttgaacagcaaagaagaacttttgccacctatggttatgcattagac
ccttcattagataatcaccaagtgtctactaaatatattggttctgtagaagaagctgaa
aaaaatcaaggtttaactgtgtttgaaactggtcagaaaaaaatagaaaaaagaaaaaag
tttaaagaaaatgatgcatctaatattgatggtttcttgggaccatgggcaaaatatgtg
gatgaaaaagatgtagccaaaccctcagaagaagaacaaaaagaattagatgaaatcacg
gccaagaggcagaaaaaaggcaaacaggaagaagagaaacctggggaggagaagacaatc
ttacatgttaaagaaatgtatgactaccaaggcagatcctatcttcacatacctcaggat
gttggtgttaatctgcggtctactgtgccacctgagaagtgttatcttcccaagaaacaa
attcatgtgtggtctggacatacgaagggcgtcagtgctgtcagattgtttcctctctct
ggccatttattgctgtcttgttccatggactgtaaaattaagctatgggaggtttatgga
gacaggcgctgtctacgaacatttattggtcacagtaaagctgttagggacatctgcttt
aatactgcaggaacacagttcctcagtgcagcttatgacaggtatcttaagctctgggac
actgagacaggacagtgtatatcaaggtttacaaaccgaaaagtgccctattgtgtcaaa
tttaatcctgatgaagataagcaaaatctctttgtagctggcatgtctgataagaagatt
gtgcagtgggacattcgaagtggagaaattgtgcaggagtatgaccggcatttgggagcc
gtcaacaccattgtttttgttgatgagaacaggagatttgtgagcacatctgacgataag
agcctccgagtttgggaatgggacatccctgtggatttcaagtacatagcagagcccagt
atgcactcgatgcctgcagtgactttgtctccaaatgggaaatggctagcgtgccaatcg
atggacaaccaaatcttaatttttggagcacagaatagatttagattaaataagaaaaaa
atttttaagggccatatggtagcaggttatgcttgtcaggtggacttttcgccagacatg
agctatgtgatttcaggagatggaaatggaaaattgaatatctgggactggaagaccaca
aaactctacagtcgatttaaagctcatgataaggtgtgcataggtgcagtgtggcatcct
catgaaacatctaaagtcatcacatgtggttgggatggtctcattaaattgtgggattaa
DBGET
integrated database retrieval system