Panthera tigris altaica (Amur tiger): 102959523
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Entry
102959523 CDS
T02988
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion molecule 1
KO
K06527
vascular cell adhesion molecule 1
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg04064
NF-kappa B signaling pathway
ptg04514
Cell adhesion molecules
ptg04668
TNF signaling pathway
ptg04670
Leukocyte transendothelial migration
ptg04933
AGE-RAGE signaling pathway in diabetic complications
ptg05143
African trypanosomiasis
ptg05144
Malaria
ptg05417
Lipid and atherosclerosis
ptg05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
102959523 (VCAM1)
04668 TNF signaling pathway
102959523 (VCAM1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102959523 (VCAM1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
102959523 (VCAM1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
102959523 (VCAM1)
05143 African trypanosomiasis
102959523 (VCAM1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
102959523 (VCAM1)
05418 Fluid shear stress and atherosclerosis
102959523 (VCAM1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
102959523 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ptg04090
]
102959523 (VCAM1)
04091 Lectins [BR:
ptg04091
]
102959523 (VCAM1)
CD molecules [BR:
ptg04090
]
Proteins
102959523 (VCAM1)
Lectins [BR:
ptg04091
]
I-type lectins (Siglecs)
102959523 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
C2-set
ig
Ig_2
V-set
C2-set_2
ICAM_N
Ig_6
Ig_4
Ig_5
ICAM1_3_5_D2
C1-set
Motif
Other DBs
NCBI-GeneID:
102959523
NCBI-ProteinID:
XP_007093691
LinkDB
All DBs
Position
Un
AA seq
748 aa
AA seq
DB search
MFSSQQQLKMPRKMFVIFGASNILCMVFTISQAFKIETFPENKIVAQIGDVVSLTCRTTG
CEPPSFSWRTHLDSPLNGQVRNEGSNSTLTMDPVGFRNEYSYLCTAICGSEKREKGIQVE
IYSFPKDPEIRLSGPLEVGKPVTVTCLVPDVYPFDRLEMNLLKGNHLLQNKDFVEPMERK
SLETKSLEVTFTPTNEDIGKALVCQAKLHIDEIDFKPKERETTKKLQVYISPKNTVISVN
PSTRLQEGGSVTMTCSSEGLPAPQIFWSKKLDNGNLQLLSGNSTLTLIAMRTEDSGIYVC
EGVNQVGKNGKEVELIVQEKPFTVEISPGPQIVAQIGDSVVLTCGVTGCESPSFTWRTQV
DSPLSGKVKTEGNKSTLTLSPVGFENEHSYLCTVTCGRKKVEKGIKVDLYSFPRDPEIEM
SGLPVNGNPVTVSCRVPNVYPSDRLEIELLKGESIIGNKNFLENIDKKYLETESLDMTFI
PTTEDTGTVLVCLAKLHIDEMEFEPKQRQSTQTLYVNVAPRDTTILVSPSSILEEGSSVN
MTCSSNGLPAPKILWSRQLNNGHLQPLSENSTLTLTSTKMEDSGVYVCEGINQAGIDRKE
VELIIQVAPKDIQLTAFPSESVKEGDTVIISCTCGNVPKTWIILKKKAETGDTVLQSRDG
AYTIHKVQLEDAGVYECESKNEVGLQLRSLTLDVKGRGNYQDYFSPELLVLYCSSSLIIP
AIGMIIYFARRANMKGSYSLVEAQKSKV
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgttctcatcacagcaacaactaaaaatgcctaggaagatgtttgtgatctttggagct
tcaaatatactttgcatggtgtttacaatttctcaagcttttaaaatagagaccttccct
gaaaacaaaattgttgctcagattggtgatgtcgtttcactgacttgcaggacaacaggc
tgtgagcccccatctttctcttggagaacccatttagatagtccactgaatgggcaggtg
agaaatgaggggtccaattccacgctgaccatggatcccgttggtttcaggaatgaatac
tcttacctgtgcacagcgatttgcggatctgagaaacgggaaaaagggattcaggtggag
atttactctttccctaaggacccagagatccgtctgagtggccccctggaagttgggaag
ccagtcacagtcacatgcttggtccctgatgtttatccatttgacaggctggagatgaat
ttgctgaaaggcaaccatctcttacagaataaggactttgtagaacctatggaaagaaag
tccctggaaaccaagagtttggaggtaaccttcactcctaccaatgaagatattgggaaa
gctcttgtttgccaagcaaaattacacattgatgaaattgactttaagcccaaagaaagg
gagactacgaaaaaactgcaagtctacatctcacccaagaacacagttatctctgtgaat
ccctccacaaggctgcaggaaggtggttctgtgacaatgacatgctccagtgaaggtcta
ccagctccacagattttctggagcaaaaaattagataatgggaatctacagctcctttct
gggaactcaactctcactttaattgctatgaggacagaagattctggaatttatgtgtgt
gaaggagtcaatcaagttgggaaaaatggaaaagaggtggaattaattgttcaagagaaa
ccattcactgttgagatctcccccgggccccagattgttgctcagattggtgactcagtt
gtgttgacatgtggtgtcacaggctgtgagtccccatctttcacttggagaacccaggta
gacagccctctgagtgggaaggtgaagactgaagggaacaagtccacgctgaccctgagt
cctgtgggttttgagaatgaacattcttatctgtgcactgtaacctgtggccgtaagaaa
gtggaaaagggaattaaagtggacctctactcattccctagagatccagagattgagatg
agtggtctgccagtgaatggaaacccagtgactgtaagctgccgggttcctaatgtgtat
ccttctgaccggctggagattgaattacttaagggggagagtattatagggaataaaaat
tttctggagaacatcgacaagaagtatctagagactgagagtttggacatgaccttcatc
cccaccactgaagatactggaacagttcttgtttgtctggctaagttacatattgatgaa
atggaatttgaacccaaacaaaggcagagtacacagacactttatgttaatgttgccccc
agggatacaaccatcttggtcagcccctcctccatcctggaggaaggtagttctgtgaat
atgacatgctccagcaatggccttccagctccaaaaatcctctggagcaggcagctaaac
aatgggcatctacagcctctttctgaaaattcaaccctcaccttaacttctacaaaaatg
gaagactctggtgtttatgtgtgtgaagggattaaccaggctggaatagacagaaaagaa
gtcgaattaattatccaagttgctccgaaagacatacaacttacagcttttccttctgag
agtgtcaaggaaggagacactgttattatctcctgtacatgtggaaatgttcccaaaact
tggataatcctgaagaaaaaagcagagacgggagacacagtgctacagtccagagatggt
gcatataccatccacaaggtccagttagaggacgctggagtgtacgaatgtgaatctaaa
aatgaggttggcttgcaattaagaagtttaacccttgatgttaaaggaagaggaaattac
caggactatttttctcctgaacttctcgtgctctattgttcatcttccttaataatacca
gccattggaatgatcatttactttgctagaagagccaacatgaaagggtcatacagtctt
gtagaagcacagaaatcaaaggtgtag
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