Panthera tigris altaica (Amur tiger): 102960247 Help Entry 102960247         CDS       T02988                                  Symbol VPS39 Name (RefSeq) VPS39, HOPS complex subunit   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism ptg  Panthera tigris altaica (Amur tiger) Pathway ptg04140   Autophagy - animal ptg04148   Efferocytosis ptg05132   Salmonella infection Brite KEGG Orthology (KO) [BR:ptg00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     102960247 (VPS39)    04148 Efferocytosis     102960247 (VPS39)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     102960247 (VPS39)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ptg04131]     102960247 (VPS39) Membrane trafficking [BR:ptg04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     102960247 (VPS39) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C TPR_Vps41 Clathrin Beta-prop_RIG_2nd Lgl_C SAM_CEP-1_C DUF4145 Motif Other DBs NCBI-GeneID:  102960247 NCBI-ProteinID:  XP_007081757 LinkDB All DBs Position Un AA seq 875 aa AA seqDB search MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDAGCNRFEVTLEKSNK NFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDLEHTETGE EVLRMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVD GKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQKCALNWTDIPVAME HQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGSNIIYVASNHFVWRLIPVPM ATQIQQLLQDKQFELALQLAEMKDDSDSEKQQQIHHIKNLYAFNLFCQKRFDESMQVFAK LGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPVLSGAELEKAHLALIDYLTQKRSQLVKKL NDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEE SEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTENL HLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLVENFKSLAIPYLEHVIHVW EETGSQFHNCLIQLYCEKVQGLMKEYLLSFPAGKTPVPAGEEEGELGEYRRKLLIFLEIS GYYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTKMAEEYCHKHYDQNK DGNKDVYLSLLRMYLSPPSVHCLGPIKLELLEPQANLQAALQVLELHHSKLDTTKAINLL PANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKV CMVCKKKIGNSAFARYPNGVVVHYFCSKEVNPADT NT seq 2628 nt NT seq  +upstreamnt  +downstreamnt atgcatgacgccttcgagccagtgccgatcctggaaaagctgcctctgcagatcgactgt ctggctgcctgggaggaatggcttcttgttggcaccaaacaaggacatcttcttctctat aggatccggaaagatgctggttgcaacaggtttgaagtgacactagagaaatccaataaa aacttctccaaaaagattcaacagatccatgtggtttcccagtttaagattctggtcagc ttgttagaaaataacatttatgtccatgacctgttgacatttcaacaaatcactacggtt tcaaaggcaaagggagcatcactgttcacatgtgaccttgagcacacagagactggtgag gaggtgttgcggatgtgtgtggcagtgaaaaagaagctgcagctctatttctggaaggac agggaatttcacgaattgcagggggactttagtgtaccagatgtgcccaagtccatggca tggtgtgaaaattctatctgtgtgggtttcaagagagactactacctaataagggtggat ggaaaggggtccatcaaagagctctttccaacaggaaaacagctggagccgttagttgca cctctggcagatggaaaagtggctgtgggtcaggatgatctcaccgtggtgctcaatgag gaggggatatgcacacagaagtgtgccttgaactggacagacataccagtggccatggag caccagcctccctacatcattgcagttttgcctcgatatgtggagatccgaacattcgaa ccgaggcttctggtccagagtattgaattgcaaaggccccgcttcattacctcgggagga tcaaatattatctatgtggccagcaatcattttgtttggagactcattcctgtccccatg gcaacccaaatccaacagcttctccaggacaagcagtttgaactggctctacagcttgca gaaatgaaagatgattccgacagtgaaaagcagcaacagatccatcacattaagaacttg tatgccttcaacctcttctgccagaagcgttttgatgagtccatgcaggtctttgctaag cttggcacagatcctacccatgtgatgggcctgtacccggacctgctgcccacagactac aggaaacagctgcagtaccctaacccactgcctgtgctctcgggggctgaattggagaag gcacacttagctctgattgactacctgacacagaaacgaagccaactggtaaagaagctg aatgactctgatcaccagtctagcacctccccgcttatggaaggcactcccaccattaaa tccaagaagaagctgttgcaaatcatcgacaccaccttgctcaagtgctacctgcatacg aacgtggccctggtggcccctctgctgcgcctggagaacaatcactgccacatcgaagag agcgagcatgtgctgaagaaggcgcacaagtacagcgaattgataatcctgtatgagaag aaggggctccatgagaaagctctgcaggtgctggtggaccagtccaagaaagcaaactcc cctctgaaaggccatgagaggaccgtgcagtatctgcaacatttgggcacagaaaacctg catttgattttttcctactcagtgtgggtgctgcgagacttcccagaggatggcctgaag atatttaccgaagatctcccagaggtagagtccctgccacgagaccgagtgcttggcttc ttggtggagaattttaagagtctggctattccttatctggaacatgtcatccacgtttgg gaggagacaggctctcagttccacaactgcctaatccagctgtactgtgagaaggtgcaa ggtctgatgaaagagtatctcctgtccttccctgcaggcaaaactccagttcctgctgga gaggaagaaggtgagctgggagaataccgacggaagctccttatattcttggaaatttct ggctactatgatccaggccggctcatctgtgacttcccttttgatggcctcttagaagag cgcgcactgctgctggggcgcatggggaagcatgagcaagccctcttcatctacgtccac atcctgaaggacacaaagatggctgaggagtactgccacaaacattatgaccaaaataaa gatggcaacaaagatgtgtatctgtccctgctccggatgtacctgtcaccccccagtgtt cactgcctgggaccaatcaagctggaactgctggagccacaagccaacctccaggctgcc ctgcaggtcctcgagctgcaccacagcaagctggacaccactaaggccatcaaccttctc ccagcaaacactcagattaatgatatacgcatctttctggaaaaggtcttggaagaaaat gcacaaaagaaacggttcaatcaagtgctcaagaaccttctccatgcggaatttctgagg gtccaggaagagaggattttacaccagcaggtgaagtgcatcatcaccgaggagaaggtg tgcatggtgtgtaagaagaagatcgggaacagtgcatttgcaagataccccaatggcgtg gtcgtgcactacttctgttccaaagaggtaaacccagctgacacctga

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