Panthera tigris altaica (Amur tiger): 102960538
Help
Entry
102960538 CDS
T02988
Symbol
ZC3H13
Name
(RefSeq) zinc finger CCCH-type containing 13
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
ptg
Panthera tigris altaica (Amur tiger)
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptg03019
]
102960538 (ZC3H13)
Messenger RNA biogenesis [BR:
ptg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
102960538 (ZC3H13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_2
zf-CCCH_4
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
102960538
NCBI-ProteinID:
XP_007085448
LinkDB
All DBs
Position
Un
AA seq
1664 aa
AA seq
DB search
MSKIRRKVTVENTKTISDSTSRRPSVFERLGPSTGSTAETQCRNWLKTGNCLYGNTCRFV
HGPSPRGKGYSSNYRRSPERPTGDLRERMKNKRQDVDTESQKRNTEESSSPVRKESSRGR
HREKEDIKITKERTPESEEENVEWETNRDDSDNGDINYDYVHELSLEMKRQKIQRELMKL
EQENMDKREEIIIKKEVSPEVIRSKLSPSPSLRKSSKSPKRKSSPKSSSSASKKDRKATA
VSSPLLDQQRNSKGNQSKKKGPRTPSPPPPLQEDIVLGKKYKEKYKVKDRIEEKPRDGKD
RGRDFERQREKRDKPRSTSPVGQHHSPLSSRHHSSSSQSGSSIQRHSPSPRRKRTPSPSY
QRTITPTLRRSASPYLSHSLSSPQRKQSPPRHRSPMREKGRHDHERASQSHDRRHERREE
TRSKRDREKDTREEREYEQDLSSSRDHRDDREPRDGRDRRDARDTRDRRELRDSRDIRDS
REMRDYSRDNKESRDPRDSRSARDTHDYRDRESRDTHRKEDAYQEESRSYGRNHLREESS
RTEIRNDARNESRSEIRNDRMGRSRGRGPELPEKGSRGTRGSQIDSHSSSSNYHDSWETR
SSYPERDRYPERDNRDQARDSSFERRHGERDRRDNRERDQRPSSPIRHQGRNDELERDER
REERRVDRVEDRRDERARERDRERERDRERERERERERDREREKERELERERARERERER
EREKERDRERERDRDHDRERERERERDREKEREREREERERERERERERERERERERERA
REREKEREGQRDWEDKDKGRDDRREKREDTREDRNPRDGHDERKSKKRYRNEGSPSPRQS
PKRRREHSPDSDTYNSGDDKNEKHRLLSQVVRPQESRSLSPSHLPEDRQGRWKEEDRKLE
RKESSRRYEEQELKEKVSSVDKQREQTEIPESSRTRPQDMMGHHPSDERDASDRAHDENK
KKAKIQKKPVKKKKEEDVGLERGNTETASEDGQVFSPKKGQKKKSIEKKRKKSKGDSDIS
DEEAVLQSKKKRGPRTPPLTAKEELVDLSNGKDGGLEDSQKKEDTAFSDWSDEDVPDRAE
VAEPERAATAATPGRTPSPSSLPPPPPPAAAASTTASAALSSSASAAFSASATSISSSAA
PTNSTGEDSHRKCHRTRAEKVEAPHVTIEDAPHRKPLDQKRSSSLGSNRSNRSHTSGRLR
SPSNDSAHRSGDDQSGRKRVLHSGSRDREKTKSLEITGERKSRIDQLKRGEPSRSTSSDR
QDSRSHSSRRSSPESDRQVHSRSGSFDSRDRLQERDRYEHDRDRDRERRDTRQREWDRDA
DKDWPRNRDRDRLRERERERDKXXXXXXXXXXXRERLIPASMERDRDRDRDRTFESSSQI
ESVKRSEAKLESEHERDLEGTSRDCLALDKEKMDKDLGSVQGFEDLNKAERTESVEGDDE
SKLDDAHSLGSGAGEGYEPISDDELDEILAGDAEKREDQQDEEKMPDPLDVIDVDWSGLM
PKHPKEPREPGAALLKFTPGAVMLRVGISKKLAGSELFTKVKETCQRLLEKPKDADSLFE
HELGALNMAALLRKEERASLLSNLGPCCKALCFRRDSAIRKQLVKNEKGTVKQAYTSAPV
VDNELLRLSLRLFKKKTACHAPGHEKTEDSKLSQSTVQQELCVS
NT seq
4995 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaattagaaggaaggtcacagtggaaaataccaagaccatatctgatagcaca
tcccgaagacccagtgtatttgagaggctcggacccagcactggcagtacagcagagaca
cagtgccgtaattggctgaagactggcaactgcctctatggaaacacatgtagattcgta
catggcccttcaccccgtggtaaaggttatagcagcaattatagaaggtcaccagaaaga
cctacaggggatcttagagaaagaatgaagaataagcgccaagatgtggacactgagtcc
cagaaacgaaacacagaggagtcatcctcacctgttaggaaagaatcttcgagagggaga
catagggaaaaggaagacattaaaatcactaaggagagaactcccgaaagtgaagaagaa
aatgtagaatgggaaactaatagagatgattctgacaatggagatattaattatgattat
gttcatgagttgtcgttggaaatgaagcgtcagaagatacagagggaattaatgaagctt
gaacaagaaaacatggacaaaagagaagaaattattattaaaaaggaggtttcaccagaa
gtgattcgatcaaaattatctccatctccttctctaagaaagtcaagcaaatctccaaag
cgaaagtcaagccctaaatcgtcatcttcagcaagcaagaaagacaggaaggcaactgca
gtatcctcacccttgttggaccagcagaggaattcaaaaggcaaccagagtaaaaagaaa
ggacctcgaacgcctagtccaccccctcctttacaggaagatattgttctggggaaaaaa
tataaagaaaagtataaagtaaaagacaggatagaagaaaaaccaagagacggaaaggac
agaggacgagattttgaaagacaaagagaaaaaagagacaagccaaggtctacttcccca
gtaggacagcatcattctcctctatcttctagacatcactcatcttcctcacagtcagga
tcatctattcaaagacattctccttctcctcgtcgaaaaaggactccttcgccatcatat
cagaggacaataactccaactttacggcgctctgcttctccttacctttcacattctctg
tcttctcctcagagaaagcaaagtcccccaagacatcgctctccaatgcgagagaaaggg
aggcatgaccatgaacgagcttcacagtctcatgatcggcgtcatgaaagaagggaagag
accagaagcaaaagagatagagaaaaggacacaagagaagaacgagagtatgaacaggat
ctgagctcttctagagaccacagagatgaccgagaacctcgagatggccgggatcgaaga
gatgccagggatactagagaccgacgggaactgagggactccagagacattcgggactcc
agggagatgagagattatagcagagataacaaagagagccgtgatcccagagattctcgg
tctgctcgtgatacccacgactacagggaccgtgaaagtcgagacacccatcgaaaggag
gatgcctatcaggaagaatcccgaagttatggcagaaaccatttgagagaagaaagctct
cgtactgaaataaggaatgatgccagaaatgagtctcgaagtgaaattaggaatgaccgg
atgggcagaagtagggggagaggtccagaattacctgaaaagggaagtcgaggcacaaga
ggttctcaaattgatagtcacagtagtagtagcaactatcatgacagctgggaaactcga
agtagctatcctgaaagagacagatatcctgaaagagacaacagagatcaagcaagggat
tcttcgtttgagagaagacatggagagagagaccgtcgtgacaacagagagagagatcaa
agaccaagctcaccaattcgacatcagggaaggaatgacgagcttgagcgtgatgaaaga
agagaggaacgaagagtagacagagtggaggacagaagagatgaaagggctagagaaaga
gacagggagcgagagcgagaccgagagcgcgagagggagagggagcgtgagcgggaccgg
gaaagagagaaggagagagaactagagagagagcgcgccagagagcgggagagagaaaga
gaaagagaaaaggagagggaccgcgaaagagagcgagatcgtgaccatgatcgagagagg
gagagagagagggaacgagatagggaaaaagagcgggagcgagaaagagaagagcgggag
agagagagagagcgagaacgggagagggagagagagcgagagcgggaacgagagagagcg
agggaaagagagaaagaacgagaggggcagagggattgggaagacaaagacaaaggacga
gatgaccgcagagaaaagcgggaagatacccgagaagaccggaatcccagagatggacac
gatgagagaaagtccaagaagcgctatagaaatgaagggagtcctagccctcgtcagtca
cctaagcgccggcgagaacattctcccgacagtgacacctacaacagtggagatgataaa
aatgaaaaacatagactcttgagccaggttgtacgacctcaagagtctcgttctctcagt
ccatcacaccttccagaagacaggcagggtagatggaaagaggaagatcgtaaactggaa
agaaaagagagttcaaggcgctatgaagagcaggagcttaaagagaaagtttcttctgta
gataaacagcgagaacagacagaaatcccggaaagctcaagaactcgcccacaagacatg
atgggacaccacccgtctgacgagcgagacgcctctgatcgagctcatgatgagaacaag
aaaaaagccaaaattcagaagaaacctgttaagaaaaagaaggaggaggatgtcgggtta
gagaggggtaacacagagacagcatctgaagacggtcaagtattttcaccaaaaaagggc
cagaagaagaaaagtatagagaagaaacgtaagaaatccaaaggcgattctgatatttct
gatgaagaagccgtcctgcagagtaagaagaagagaggcccgcggacgccccctctaaca
gccaaagaggaattggttgacctgtccaatggtaaggatggcggtctggaggattctcag
aaaaaggaagacacggcgttcagcgactggtctgacgaggacgtgcctgaccgggcggag
gtggcggagccggagcgcgccgccacggctgccactcccggaaggactccttccccgtcc
tctcttcctccccctccgcctcccgccgctgccgcttctaccaccgcctctgctgctctc
tcctcgtctgcctccgccgccttcagcgcgtccgccaccagcatttcctcgtctgccgct
cccaccaacagcaccggtgaagactcgcacaggaagtgccatagaacccgcgccgagaag
gtggaggcgccgcacgtcactatagaagatgcgccgcatcgcaagccgctggatcaaaag
aggagtagcagcctcggcagcaatcggagcaatcggagccatacgtctggtcgtctccgc
tccccgtccaatgattccgcccatcgaagtggggatgaccaaagtggtcgaaagagagta
ctgcatagtggctcgagagatagagagaaaacaaaaagtctggagatcacaggagagagg
aaatctaggattgatcagttaaagcgtggagagcccagtcgaagtacttcttcagatcgc
caggattcaaggagccatagttcaagaagaagttctcctgaatcagatcgacaggtccat
tcaagatccgggtcgtttgatagcagagataggcttcaagaacgtgatcgatatgagcat
gatagagaccgggacagagagaggagagacacaagacagagagaatgggaccgagatgct
gataaagattggccacggaacagggaccgagatagattgcgggaacgagagagagaacga
gacaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaagagagagactaattcctgct
tccatggaaagggacagggacagagacagagacagaacttttgagagttcttctcaaata
gagtctgtaaaacgcagtgaagcaaaactggagagtgaacatgaaagagacctagaaggc
acttcccgagactgtcttgctttggataaagaaaaaatggataaagatctaggatctgtg
cagggatttgaagatctaaacaaagcggagagaactgagagtgtggaaggagatgacgaa
tccaagttagatgatgcacattcattaggatctggtgctggagaaggatatgagccaatc
agtgatgatgaactagatgaaattctagcaggtgatgctgaaaagagggaagaccaacag
gatgaggagaagatgccagatccattagatgtgatagatgtggattggtctggtcttatg
ccaaagcatccaaaagaaccacgagagcccggggctgccctcttaaaattcacacctgga
gctgttatgctaagagtggggatttctaaaaagttggcaggttctgaactcttcaccaaa
gtcaaagaaacatgtcagagacttttagaaaaacccaaagatgcagacagtctttttgaa
catgaactgggggctctcaacatggctgcattactacgaaaagaagagcgagcaagtctt
cttagtaatcttgggccctgttgtaaagcgttatgcttcagacgggattcagcaatccgg
aagcaacttgttaaaaatgagaagggcaccgtgaaacaggcttacacaagtgctccagtg
gtagacaatgaattactgcgattgagtcttcggttatttaagaagaagactgcttgtcat
gccccaggacacgagaagactgaagatagtaaactctcgcagtccaccgtccagcaggaa
ctgtgtgtgtcttag
DBGET
integrated database retrieval system
