Panthera tigris altaica (Amur tiger): 102961830
Help
Entry
102961830 CDS
T02988
Symbol
TMF1
Name
(RefSeq) TATA element modulatory factor 1
KO
K20286
TATA element modulatory factor
Organism
ptg
Panthera tigris altaica (Amur tiger)
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptg04131
]
102961830 (TMF1)
Membrane trafficking [BR:
ptg04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
102961830 (TMF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
CCDC39
ATG16
Rab11-FIP3
Motif
Other DBs
NCBI-GeneID:
102961830
NCBI-ProteinID:
XP_015399362
LinkDB
All DBs
Position
Un
AA seq
1176 aa
AA seq
DB search
MRGLGLFVSAVREGPRPVHECSFASKWVFVVFRREIPAPVLPCLGPRVRVLPSSEARVAI
CWACSPPSFDVASCKHEQTRKLGLLRAPGTGEPRRVGNQQGREAPCPTLNERSVLGSAEC
AFLWLSHLPDSSSRISPPVSGGWDTSTWGLKSNSEPQSQPVASPKAITKPVRRTVVDESE
NFFSAFLSSTDVQTIQKSPVVSKPPAKSQRPEEEVKSTLQESLPTGQSRTSETTESKVKD
STPCVSGETLAVDTLSPKTEGKHEETVNKESDMKVSTVRLKVSENVINVKTTRENIPNMS
TAETKDVALEPKEQKHEDRQSNTPSPPVSTFSSGTSTTSDIEVLDHESVISESSASSRQE
TTDSKSSLHLMQTSFQLLSASACPEYNRLDDFQKLTESCCSSDAFERIDSFSVQSLDSRS
VSEINSDDELSGKGYALVPIIVNPSTPKTKVIESVEGKSEEEVNETLIVPTEETEMEESG
RSATPVNCEQPDILVSSTPVSEGHTVSDKVAEPHETAERKPEAHSEKEDVCKRVEFLNEK
LDKREAQLLSLSKEKALLEEAYDNLKDEMFRVKEESSSISSLKDEFTQRIAEAEKKVQLA
CKERDAAKKESKCIKEELATRLNSSETSELLKEKDEQIRGLMEEGEKLSKQQLHNSNIIK
KLRAKDKENENIIAKLNKKVKELEEELQHLKQVLDGKEEVEKQHRENIKKLNSVVERQEK
DLGRLQVDMDELEEKNRSIQAALDSAYKELTDLHKANAAKDSEAQEAALSREMKAKEELS
AALEKAQEEARQQQETLAIQVGDLRLALQRAEQAAARREDYLRHEISELQQRLQEAENRN
QELSQSVSSTTRPLLRQIENLQATLGSQTSSWEKLEKNLSDRLGESQTLLAAAVERERAA
TEELLANKIQMSSMESQNSLLRQENSRFQAQLESEKNKLRKLEDENSRYQVELENLKDEY
VKTLEETRKEKTLLNSQLEMEKMKVEQERKKAVFTQEAVKEKERKPFSVSSTPTMSRSSS
ISGVDMAGLQTSFLSQDEPHDHSFGPMSVSANGNNLYDAVRMGAGSSIIENLQSQLKLRE
GEITHLQLEIGNLEKTRSIMAEELVKLTNQNDELEEKVKEIPKLRTQLRDLDQRYNTILQ
MYGEKAEEAEELRLDLEDVKNMYKTQIDELLRQRLS
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcttgggccttttcgtctcagctgtgcgcgaagggccgaggcccgtccacgaa
tgctcgtttgcctccaagtgggtctttgttgttttccggagggagatcccagccccggtt
cttccgtgcctggggccccgggtgcgggtcctgccgtcctcggaggcgcgggtggcgatt
tgttgggcttgttccccgccctcgttcgacgtagctagctgcaagcacgagcagaccaga
aaactgggattgctccgcgctccgggcactggggagccgcgacgtgtaggaaatcagcag
ggacgggaggcaccgtgcccaacgcttaacgagcgctccgtgctcggcagcgcggaatgt
gcttttttatggctttctcatctcccagacagctcctcgagaataagtccccctgtcagt
ggaggatgggatacttcaacctgggggttaaaatcaaacagtgaacctcagagtcagcct
gtagcctctcctaaagcaataacaaagccagttcggagaactgtggtagatgaatctgaa
aatttctttagtgcctttctctcttcaacggatgtccagaccattcagaagagtccagtg
gtatcaaaaccaccagctaaatcacaacgaccagaagaagaagtaaaaagcactttacag
gaatccttgcccactggacagtcaagaacctcggaaacaactgagtcaaaagtgaaagac
tctactccatgtgtgtcaggggaaactctggcagtagatactctgtcgccaaaaactgag
ggcaagcatgaagaaactgttaataaagaatctgatatgaaggtatcaactgtacgtttg
aaggtatccgaaaatgtaattaatgtgaaaacaactagggaaaacatacctaatatgtca
actgcagaaacaaaggacgtggctttggaacctaaggaacaaaaacatgaagacagacag
agtaacacaccttctcctccagttagtaccttctcgtccggtacttctaccaccagtgac
attgaagtcttagatcatgaaagtgtgataagtgagagctcagcaagttcgagacaagag
actacagattcaaaatcaagtcttcacttgatgcagacatcttttcagcttctctcagca
tctgcttgtcctgaatataatcgtttagatgatttccagaaactcactgagagttgctgt
tcatctgatgcttttgaaagaatagactcgtttagtgtgcagtcattagatagtcgtagc
gtaagtgaaatcaattcagatgatgaactgtcaggcaagggatatgctttagtacctatt
atagttaatccttcaactccaaagactaaagtaattgaatctgttgaaggaaaatctgaa
gaagaagtaaatgaaacattaattgtacccactgaagaaacggaaatggaagaaagtgga
cgaagtgcaacacctgtcaattgtgaacagcctgatatcttggtttcttctacaccagta
agtgaaggacatactgtctcagacaaagtggccgagccgcacgaaactgctgaaaggaag
ccagaagcacattctgagaaggaagatgtttgcaagagagtcgaatttctgaatgagaaa
ctggataaaagggaggctcagttattatctcttagtaaagaaaaagcacttctagaagaa
gcctatgataatctgaaagatgaaatgtttagagtgaaagaagaaagcagcagcatttct
tccttgaaagatgaatttactcaaagaattgcagaagcagaaaagaaagttcagctagcc
tgtaaagagagagatgctgctaaaaaggaaagcaaatgtataaaagaagaacttgctact
agattaaatagtagtgaaacttcagaacttttgaaagagaaagatgagcagatccgaggg
ttaatggaagaaggagaaaaactttcaaaacagcagctgcataattctaacatcattaag
aaattaagagctaaagacaaagaaaatgaaaatattattgcaaaactgaacaaaaaagtt
aaagagctagaagaagagttgcaacatttaaaacaggtccttgatggcaaagaagaggtt
gagaaacaacatagagaaaacattaaaaaactaaattctgtggtagaacgccaagagaag
gatcttggccgacttcaggtagacatggatgaacttgaagaaaagaaccgaagtattcaa
gctgctctggatagtgcatacaaagaacttactgatctccacaaagccaatgctgcaaaa
gatagcgaggcacaggaagctgctctgagtcgtgaaatgaaagccaaagaagaactttct
gcagcactagagaaggcccaagaagaagcccgtcagcagcaagaaacgttagcgattcaa
gtgggagacctcaggctggcactgcaacgtgcagagcaggcggctgccagaagagaggat
tatttacgccatgagatcagtgaactccagcagagacttcaggaagcagagaatcgaaac
caagagctgagtcaaagtgtttcatcaacaacaagaccattgcttcgacagatagaaaat
ttgcaagcaactctagggtcccagacatcatcgtgggagaagttagagaagaatctttct
gataggcttggtgaatcccagaccttgctggcagcagcagttgaaagagaacgtgcagct
acagaagaactccttgccaacaaaattcaaatgtcctccatggagtcacagaattctctc
ttaaggcaggaaaatagtagatttcaggcccagctagaatcagagaaaaataagctaaga
aaactggaggatgaaaatagtaggtaccaggttgaattagaaaacctaaaagatgaatat
gtaaaaacacttgaagaaacaaggaaagaaaagacactattgaatagtcagttagaaatg
gagaaaatgaaagttgaacaagaaaggaagaaagcagttttcacccaagaagcagtaaaa
gaaaaggaacggaagccattttctgtttctagcactcccacaatgtcacgatcaagttca
ataagtggagttgatatggcagggctacagacatcttttctgtctcaggatgagcctcat
gatcattcatttggaccaatgtctgtatcagcaaatggaaacaatctttatgatgctgta
agaatgggagcaggatccagcattattgaaaatctacagtctcagctaaagctaagggaa
ggagaaattactcatttacagctggaaattggcaatctagaaaaaacccgctcaataatg
gctgaagagctcgttaaattaactaatcaaaatgatgaacttgaagagaaagtgaaggag
atacccaaacttcgaactcagctaagagatttggatcagagatacaacactattctgcag
atgtatggagagaaagcagaagaggcagaagaacttcgattagatcttgaagatgtaaaa
aatatgtataagactcaaatagatgaacttttaagacaaagactcagttaa
DBGET
integrated database retrieval system
