Panthera tigris altaica (Amur tiger): 102963020
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Entry
102963020 CDS
T02988
Symbol
BRIP1
Name
(RefSeq) BRCA1 interacting protein C-terminal helicase 1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg03440
Homologous recombination
ptg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102963020 (BRIP1)
03460 Fanconi anemia pathway
102963020 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptg03400
]
102963020 (BRIP1)
Enzymes [BR:
ptg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
102963020 (BRIP1)
DNA repair and recombination proteins [BR:
ptg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
102963020 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
102963020 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
ARCH_RTEL1
Motif
Other DBs
NCBI-GeneID:
102963020
NCBI-ProteinID:
XP_007086817
LinkDB
All DBs
Position
Un
AA seq
1230 aa
AA seq
DB search
MMASMSEYTIGGVKITFPYKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSVALLCSA
LAWQQSFNGKPVDKSLSKKAEEPLSCCCACHSKNFTNIDLKQGTSHHFNCPSTPPSERYG
TSSTCQEDSPEKTTLAAKLSAKKQASIKRDENDDFQVEKKRIRPLETTQQIRKRHCFEKE
VRDLDAKVASGKTTKLNSPLGKINSFSPQNPPGHCSRCCCSTKQGNSQGYSNTTKKDHGG
KSKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEVVGNFNRNEKCM
ELLDGKNGKSCYFYHGVHKISDQHTLQTLEGMCKAWDIEELVSLGKKLKACPYYTARELI
EDAHIVFCPYNYLLDAQIRESMDINLKEQIVILDEAHNIEDCARESASYSVTEVQLWFAR
DELDTMVNNNIRKKDHEPLRAVCYSLINWLEANSEHLMERDYESSCKIWSGSEMLLNLHK
MGITTATFPILQGHFSSVLQKEEKVLPIHGREETREVPIISASTQIILKGLFMVFDYLFR
QNSKFADDYKVAIQQTYSWINQTDSSDKNEFFAQAKSRKRVRQKTAVRVLNFWCLNPAVA
FSDINGKVWTIVLTSGTLSPMKSFSSELGVTFSIQLEANHVINNSQVWVGTIGSGPKGRN
LCATFQHTETFEFQDEVGALVLSVCQAVSQGILCFLPSYKLLEKLKERWLSTGLWHNLEL
VKTVIVEPPAGEKIDFDELLQMYYDAIKYKGKKDGALLVAVCRGKVSEGLDFSDDNARAV
ITIGIPFPNVKDLQVVLKRQYNDQHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHKNDW
GALILVDNRFSSNPAQYISGLSKWIRQQVQYHSTFESAMESLAEFSKKHQKVIDVSKEDR
KFIQDSGSTLEVACLKDNTLTYLSEAASHLPPENPREGEAKMCVQELHCPKITTSLSLPG
DIISRKDQDDPILLEESAQTMKAERIVISRSTSPTFNKQTKRVNWSSFNSLGHYITDQIL
TATPKSRSPEDCASSASPFETEKGCKTVLPLTDKCESSSLTVDTSVEPCPQSEIVISPIK
IDATLLKENYSKQLFYEETLGPDIELSLVGKEAKLSTSNRASDTEAEDESIYFTPELYDP
EDTNEEKNEQVESDRDNRLANNSKCILAEDLFEIRTEKGVXQEIKAEDCTKLNRLVNIXS
KIDDNGSNIKTTHINELDLGKTRETDTKEY
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgatggcttcaatgtctgaatatacaattggtggggtgaaaattacctttccttataaa
gcttacccatcacagcttgctatgatgaattctattgtcagaggattaaatagtaagcaa
cattgtttactggagagccctacaggaagtgggaaaagtgtagccttactttgttctgct
ttagcatggcaacaatcttttaatggaaagccagtggacaaaagcttaagtaaaaaagct
gaggaaccattgtcatgttgttgtgcatgccattcaaagaattttacaaacattgacttg
aaacaaggaacttcacatcatttcaattgtccaagtacaccaccttctgaaagatatggc
acttcatcaacttgtcaagaagactctcctgaaaaaactacgttggctgcaaagctatct
gccaagaaacaggcttccataaaaagagatgaaaatgatgattttcaagtagagaagaaa
agaattcgacccttagaaactacacagcagataagaaagcgtcattgttttgaaaaggaa
gtgcgtgatttggatgcaaaagttgcttcaggaaagaccacaaaactcaactctccatta
ggaaagataaactccttttctccacaaaatccccctggtcactgttccaggtgttgttgt
tctactaaacaaggaaacagtcaaggttactcaaataccactaagaaggatcatgggggg
aaatccaagatacccaaaatatattttgggacgcgcacacacaagcagattgctcagatt
actagagagctccggagaacagcatactcaggggtcccaatgactattctttccagcagg
gatcatacttgtgtccatccagaagtagtgggcaacttcaacagaaatgaaaagtgcatg
gagttgctggatggaaaaaatggcaaatcctgctatttttatcatggcgtacataaaatt
agtgatcaacacacattacagactctggaagggatgtgcaaagcctgggatatagaagaa
cttgtcagcttgggaaaaaaactaaaggcatgtccgtattacacagcacgggaactaata
gaagatgctcacatagtattttgtccctacaactatcttctagatgcacaaataagggaa
agtatggatatcaatctgaaagaacagattgtcattttagatgaagctcataacattgag
gactgtgctcgggagtcagcaagttacagtgtaacagaagttcaactttggtttgctcga
gatgaattagataccatggtcaacaataatataaggaaaaaagatcatgaacccctacga
gctgtgtgctatagcctaattaattggttagaagcaaactctgaacatcttatggaaagg
gattatgaatcatcctgtaaaatatggagtggaagtgaaatgctcttaaatttacacaaa
atgggtatcaccactgctacttttcccattttgcagggacatttttcttctgtccttcaa
aaagaagaaaaagtcttaccaattcatggtagagaggagacaagagaagtaccgattatt
agtgcttcaactcaaataatactcaaaggactttttatggtgtttgactatctttttagg
caaaacagcaaatttgcagatgattataaagttgctattcaacagacttattcttggata
aatcagactgattcttcagataaaaatgaattctttgctcaagcaaaaagtaggaaacgt
gtaagacagaaaactgcagttcgtgtgctaaatttttggtgcttaaatccagctgtggcc
ttttcagatattaatggcaaagtttggaccattgttttgacatctgggacattatcacca
atgaaatccttttcatcagaacttggtgttacttttagtatccaactggaggctaatcat
gtcattaataactcacaggtttgggttggcaccattgggtcaggtcccaagggtcggaat
ctctgtgctaccttccagcacacagaaactttcgagtttcaggatgaagtgggcgcactt
gtgttatctgtgtgtcaggctgtgagccaaggaattttgtgcttcttgccatcttacaag
ttgttagaaaagttaaaagaacgttggctgtctactggtttatggcataatctagagttg
gtgaaaacagtcatcgtagaaccaccggcaggagaaaaaattgattttgatgaattacta
cagatgtactatgatgcaatcaaatacaaaggaaagaaagatggagccctcttggtagca
gtttgtcgtggtaaagtgagtgagggtctggatttctcagatgacaatgcccgtgctgtt
ataacaatagggattccttttccgaatgtgaaagatctacaggttgtactaaagcgacag
tacaatgatcagcactccaaactgagaggtcttttacctggtcgtcagtggtatgaaatt
caagcatatagggccttaaaccaggccctaggcaggtgtattcgacacaaaaatgattgg
ggagctcttattcttgtggataatcgctttagtagtaaccctgcacagtatatatctgga
ctttctaaatggatacggcagcaggttcagtaccattcaacctttgaaagtgcaatggag
tccttggctgaattttccaaaaagcaccagaaagtcattgatgtatccaaagaggacaga
aagtttatacaggacagtgggtctacacttgaagtggcctgtttgaaggacaatacctta
acttacttatcagaagcagcaagccatctaccaccagaaaatcctagggaaggtgaagca
aaaatgtgtgtccaagaactacactgtcctaaaataaccacaagtctatctctaccagga
gacatcatctcccgaaaggaccaagatgatcctatattattggaagagtctgcccagaca
atgaaagcagaaagaattgtgatttccagatcgacaagcccaaccttcaacaaacagaca
aagagagttaattggtctagctttaattctttgggacattatattactgatcaaattctg
actgcaacacctaaatccaggtcaccagaggactgtgcctctagcgcttccccttttgaa
acagaaaaaggatgcaaaacagtcttaccactcactgataaatgtgagtcctcatctctg
acggtagacacatcagttgaaccatgccctcaatcagaaatcgttatttcaccaataaag
attgatgctactcttcttaaagaaaattattccaaacagctgttctatgaagaaaccctg
ggtccggacattgaattgtctctagttggtaaagaagctaaactttctacttcaaataga
gcttctgacacagaagcagaggatgaatctatctattttacacctgaactttatgatcct
gaagatacaaatgaagaaaagaatgaacaagttgaaagtgatagagataatagattggct
aataattcaaaatgcattttagctgaagatctttttgaaattagaactgagaaaggagtc
nnccaagaaataaaagctgaggattgcacaaagttgaatagactcgtgaatattnaaagt
aaaattgatgacaatggtagtaatataaaaacaactcatataaatgaattagacctggga
aaaactcgtgaaacagatacaaaagaatattaa
DBGET
integrated database retrieval system
