Panthera tigris altaica (Amur tiger): 102964197
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Entry
102964197 CDS
T02988
Symbol
SLC6A4
Name
(RefSeq) solute carrier family 6 member 4
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg04082
Neuroactive ligand signaling
ptg04721
Synaptic vesicle cycle
ptg04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
102964197 (SLC6A4)
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
102964197 (SLC6A4)
04721 Synaptic vesicle cycle
102964197 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptg02000
]
102964197 (SLC6A4)
Transporters [BR:
ptg02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
102964197 (SLC6A4)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
SNF
5HT_transport_N
DUF8005
Motif
Other DBs
NCBI-GeneID:
102964197
NCBI-ProteinID:
XP_007076148
UniProt:
A0A8C9JX83
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Position
Un
AA seq
630 aa
AA seq
DB search
MDTTPLNSQKELSACKDKDDCQENGVLQKGVPVPEDKVESGQISNGYSAVPSPGAEDDTQ
HSIPAATTSLVAEAHRGERETWGKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAVFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIM
AWALYYLISSFTDQLPWTSCKNSWNTGNCTNYFSEDNVTWTLHSTSPAEEFYTRHILQIH
RSKGLQDLGGISWQLALCIMLIFTVIYFSIWKGVKTSGKVVWVTATFPYIILSVLLVRGA
TLPGAWRGILFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSGVNCMTSFVSGFVIFTVLGYMAEMRNEEVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVIDEFPHIWSERREWFVLGVVITCFFGSLVT
LTFGGAYVVKLLEEYATGPAVLTVVLIEAVAVYWFYGITQFCSDVKEMLGFSPGWFWKIC
WVAISPLFLLFIICSFLMSPPQLRLFQYNYPQWSIVLGYCIGTSSFICIPTYITYRLIIT
PGTFKERIIKGITPETPTEIPYGDVHLNAI
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggataccacgcccttaaattcccagaaggagctgtcagcctgtaaggataaagacgat
tgtcaggaaaatggagttctacagaagggtgtgcctgtccccgaggataaggtggagtct
ggccaaatctccaatgggtactcagcagttccaagccctggtgcagaagatgacactcag
cactccattccggctgccaccacctccctagtggctgaggctcatcgaggggaacgggag
acctggggcaagaagatggatttcctcctctcggtcattggctatgccgtggacctgggc
aacgtctggcgctttccttacatatgttaccagaatggagggggagcgttcctcctaccc
tacaccatcatggctgtttttggggggatcccgctcttctacatggagctcgcactaggc
caataccaccgaaacggatgcatttcgatatggaggaaaatctgcccaattttcaaaggg
atcgggtatgccatctgcatcattgccttctacatcgcttcctactacaacaccatcatg
gcctgggcgctctactacctcatctcctccttcacggaccagctgccctggaccagctgc
aagaactcgtggaacactggcaactgcaccaactacttctccgaggacaacgtcacctgg
acgctccactcaacgtcccctgcagaagaattttacacgcgccacatcctgcagatccat
cggtctaagggacttcaggacctggggggcatcagctggcagctcgctctctgcatcatg
ctgatcttcactgtgatctacttcagcatctggaaaggtgtcaaaacgtctggcaaggtg
gtgtgggtgacagccaccttcccttacatcatcctttcagtcctgctggtaagaggcgcc
accctccccggagcctggaggggtattctcttctacttgaaacccaactggcagaaactc
ctggagacaggggtgtgggtggatgctgccgcacagatcttcttctctcttggtcctggc
tttggggtcttactagctttcgctagctacaacaaattcaacaacaactgttatcaagat
gccctggtgaccagtggggtgaactgcatgacgagcttcgtttccggatttgtcatcttc
acggtgctcgggtatatggcagagatgaggaacgaagaggtgtctgaggtggctaaagat
gcaggccccagcctcctcttcatcacatatgcagaagccatagccaacatgccagcgtcc
acattctttgccatcatcttcttcctgatgctaatcacactgggcctggacagcaccttt
gcaggcttggagggggtgatcacagctgtgatagatgagtttccgcacatctggtccgag
cgccgagagtggtttgtgcttggcgtggtcattacctgcttcttcggatccctcgtcacc
ctgacttttggaggggcgtacgtggtaaagctgctggaggaatatgccacaggccctgca
gtgctcaccgttgtacttatagaagcagttgctgtctattggttttacggcatcactcag
ttttgcagtgatgtgaaagaaatgcttggcttcagccctggatggttttggaagatctgc
tgggtagccatcagccctctgtttctcctgttcatcatttgcagttttttgatgagccca
ccacagctacgacttttccaatataattatcctcagtggagtatcgtcctgggttactgc
ataggaacctcgtcttttatctgcatccccacatatataacgtatcggctgatcatcact
ccagggacatttaaagagcgtatcattaaaggtatcactcccgaaacaccaacagaaatt
ccctatggggacgtccacttgaacgccatataa
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