KEGG   Panthera tigris altaica (Amur tiger): 102964427
Entry
102964427         CDS       T02988                                 
Symbol
EXOSC1
Name
(RefSeq) exosome component 1
  KO
K07573  exosome complex component CSL4
Organism
ptg  Panthera tigris altaica (Amur tiger)
Pathway
ptg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ptg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102964427 (EXOSC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptg03019]
    102964427 (EXOSC1)
Messenger RNA biogenesis [BR:ptg03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     102964427 (EXOSC1)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     102964427 (EXOSC1)
SSDB
Motif
Pfam: EXOSC1 ECR1_N S1_RRP4
Other DBs
NCBI-GeneID: 102964427
NCBI-ProteinID: XP_007080193
UniProt: A0A8C9MAC9
LinkDB
Position
Un
AA seq 195 aa
MAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLTKSSENGALPVISVMRETE
SQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYK
SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPISWCEMQCPKTHTK
EFRKVARVQPEFLQT
NT seq 588 nt   +upstreamnt  +downstreamnt
atggcgccacccgtgaggtactgcattccgggcgaacgtctgtgtaacctggaggagggc
agcccgggcagcggcacttacacgcgacacggctacatcttttcgtcgcttgctggctgc
ctgacgaagagcagcgagaacggagcgcttcctgtcatttctgtgatgagagaaacagaa
tcccaattactaccagatgtgggggctattgtaacctgtaaggtctctagcatcaattcg
cgctttgccaaagtgcacatcctatatgtggggtccacaccacttaagaactcttttcga
ggaactatccgcaaggaagatgtccgagctactgaaaaagacaaggttgagatttataag
agtttccgcccaggtgacattgtcctagccaaagtgatctccctgggtgacgcacagtcc
aattacctcctgaccactgctgaaaatgagcttggggtagtggtggcccacagtgaatcg
ggtgtccagatggttcccattagctggtgtgagatgcagtgccctaagactcacactaaa
gaattccggaaagtggctcgagtacagcctgaattcttgcagacctaa

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