Panthera tigris altaica (Amur tiger): 102964427
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Entry
102964427 CDS
T02988
Symbol
EXOSC1
Name
(RefSeq) exosome component 1
KO
K07573
exosome complex component CSL4
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102964427 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptg03019
]
102964427 (EXOSC1)
Messenger RNA biogenesis [BR:
ptg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
102964427 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
102964427 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
102964427
NCBI-ProteinID:
XP_007080193
UniProt:
A0A8C9MAC9
LinkDB
All DBs
Position
Un
AA seq
195 aa
AA seq
DB search
MAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLTKSSENGALPVISVMRETE
SQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYK
SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPISWCEMQCPKTHTK
EFRKVARVQPEFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcgccacccgtgaggtactgcattccgggcgaacgtctgtgtaacctggaggagggc
agcccgggcagcggcacttacacgcgacacggctacatcttttcgtcgcttgctggctgc
ctgacgaagagcagcgagaacggagcgcttcctgtcatttctgtgatgagagaaacagaa
tcccaattactaccagatgtgggggctattgtaacctgtaaggtctctagcatcaattcg
cgctttgccaaagtgcacatcctatatgtggggtccacaccacttaagaactcttttcga
ggaactatccgcaaggaagatgtccgagctactgaaaaagacaaggttgagatttataag
agtttccgcccaggtgacattgtcctagccaaagtgatctccctgggtgacgcacagtcc
aattacctcctgaccactgctgaaaatgagcttggggtagtggtggcccacagtgaatcg
ggtgtccagatggttcccattagctggtgtgagatgcagtgccctaagactcacactaaa
gaattccggaaagtggctcgagtacagcctgaattcttgcagacctaa
DBGET
integrated database retrieval system