Panthera tigris altaica (Amur tiger): 102964707
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Entry
102964707 CDS
T02988
Symbol
SCN11A
Name
(RefSeq) sodium voltage-gated channel alpha subunit 11
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
ptg
Panthera tigris altaica (Amur tiger)
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptg04040
]
102964707 (SCN11A)
Ion channels [BR:
ptg04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102964707 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
102964707
NCBI-ProteinID:
XP_007081080
LinkDB
All DBs
Position
Un
AA seq
1786 aa
AA seq
DB search
MKMDDRCYPVIFPDERNFRPFTSDTLATIEKRIAIQKEKKKCKDQTPAEPQPRPQLDLKV
SRKLPKLYGNIPHELIARPLEDLDPFYRNHKTFMVLNKKRTIYRFSANRALFIFGPFNPI
RSLAIRISVHSLFSMFIICTVIINCVFMATACGKDNSNIYTDNAEYVFTGIYIFEALIKI
LARGFVLDEFSFLRDPWNWLDSIVIATAFVSYSPSIRASGISLSSLRTFRVFRALKAISV
VSGLKVIVGALLRSVKKLVDVMILTLFCLSIFALVGQQLFKENLNQRCVRKDCKDMDNLD
DHCFEKKDSTEFRICGSWMGESACSEQFQCNHTKRNPDYNYTNFDNFGWSFLSMFRLITQ
DSWEKLYQQTLRTSGLFSVFFFVVVIFLGSFYLINLTLAVVTMAYEEQNRNVAAETEAKE
KMFQEAQRLLKEEKEALVAMGIDRSSLNSLEASSFSPKKRKLFGSRKRKSFFLRDSGKDQ
PPESDSDEDSTKKPHILEQTKRLSQNLSVDFCDEHGDPFQRQRALSAVSILTITMQEQEK
SQEPCLPCGGNVASRYLVWNCSPQWLCIKKALRVVMTDPFTELVITICIVINTVFLALEH
YKMDQSFEYMLYTGNLVFTGIFMAEMCLKIIALDPYNYFRRGWNIFDSIVALLSFADVMN
SVVVGKQSPLFFHSLRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVFIFSV
VGMQLFGSKFNSVRNNTKSCGPTVPCLRRWHMGDFYRSFLVVFRILCGEWIENMWECMQE
TSKPLCVVVFLLIMVIGKLVVLNLFIALLLNSFSNEERDGSLVGEAKKTKVQLALDRFHR
AFCFVIHTLVRFCHTWCRRQTLPQQKEVSGGPPAKSKDIIPLVAGVKRGSETWEEFGVVT
SAPKTLSVDHDRTWLAPLAEEEDDFESSGKINAQCVAPPEAGKQAYELPRETKTSTSPGA
QSVEIDVFSEGDIYLSAQNPRKKSDTTSVFSECSTIDPQDPFARIPEMVPKKEPERCFPK
GLGHCFPCCATDKRKSHWIIWWNLRKTCYQIVKHSWFESFVIFVILLSSGALVFEDIHLE
KRPNIQALLNCTDHIFTYIFILEMGLKWVAFGFGKYFTSVWCWLDFIIVIVSVTSLIDLK
SLKSFRTLRALRPLRALSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVNFFS
GKFGRCINVSDTNSVINYSVVANQSQCESGNFSWVTPPVNFDNVGMAYLALLQVATFKGW
MDIMYAAVDSRGKELQPGFEENPQNYLFFVAFIIFGSFFTLNLFIGVIIDNFNQQQKKIS
GEDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKCQGLAFDLVTNQVFDVIIIILIFLN
MVIMMAESNNHPEDTKAILEDLNLAFVVIFTIECLIKIFALRQYYFTNGWNLFDCVIVVL
SIVSAMVSALENQQHIPFPPTLFRVVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFN
IGLLLFLVMFIYAIFGMNCFCKVKEGFGIDDIFNFKTFVGSILCLFQITTSAGWDALLRP
MLQSNDSCNPNLDSRHLPAIAIAYFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLG
EDDFEIFYEVWEKFDPEATQFIKYPALSDFADALPEPLRVAKPNRFQFLMMDLPMVSGDR
LHCLDILFAFTTRVLGDSSGLDSMKAMMEEKFMEANPSKKLYEPIVTTTKRKEEERCAAV
IQKAFRKYKLKMSMCALEDGPRSPLQTLCNGDLSSSGVAEGKVHYD
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggatgacaggtgctacccggtgatctttccagatgaacgaaatttccgtccc
ttcacttcggacaccctggctacaattgagaagcggattgccatccaaaaggagaaaaag
aagtgcaaagaccagacaccagcagaaccccagcctcggcctcagcttgacctaaaggtc
tccaggaagttgcccaaactctatggcaacattccccatgagctgatagcaaggcccctg
gaagacttggacccgttctacagaaatcataagacgtttatggtgttgaacaaaaagagg
accatctatcgcttcagtgccaatcgtgccttgttcatatttgggcctttcaatccaatc
cgaagtttagccattaggatctcagtccattcattgttcagcatgttcatcatctgcacc
gtcatcatcaactgcgtgttcatggccaccgcctgtgggaaggacaacagcaacatatat
accgacaatgccgagtatgtcttcactgggatttatatttttgaagctttgataaaaata
ttggcaagaggttttgttctggatgagttttcttttcttcgagatccatggaactggctg
gactccattgtcattgcaacagcgtttgtatcatactcaccaagtatcagggccagtggc
atcagtctgtcgtccctacgtacctttcgggtgttcagagctttgaaagcaatttcggtg
gtttcaggtctgaaggtcatcgttggggccttgctgcgctctgtgaagaagcttgttgac
gtgatgatcctgaccctcttttgcctcagcatcttcgccctggtaggtcagcagctcttt
aaggaaaatctgaaccagagatgtgtcaggaaggactgtaaggatatggataaccttgac
gaccattgctttgaaaagaaagattccactgaattcagaatatgtggcagctggatgggt
gaaagtgcctgttctgaacagtttcagtgcaaccacaccaaaaggaatcccgactataat
tataccaattttgacaactttggctggtcttttctgtccatgtttcggctgataacccaa
gattcctgggagaagctttatcaacagaccttgcgtacctcagggcttttctcagtcttc
ttcttcgtggtggtcatcttcctgggctccttctacctgattaacttaaccctggctgtt
gtcaccatggcttacgaggagcagaacagaaacgtagctgccgagaccgaggccaaggag
aagatgttccaggaagcccagcggctgctgaaggaggaaaaggaggctctcgttgccatg
ggaattgacagaagttcacttaattcccttgaggcatcatctttttccccaaagaagaga
aagctctttggtagtaggaaacgaaagtccttttttttgagagactctgggaaagatcag
cctccagaatcagattctgatgaagattccacgaaaaagccacacatcctagagcaaacc
aaacggctgtcccagaatctgtcagtggatttctgtgatgagcacggggaccccttccaa
aggcagagggccctgagtgccgtcagcatcctcaccatcaccatgcaggagcaagagaaa
tcacaggagccttgcctcccgtgtgggggaaacgtggcgtccagatacctcgtgtggaac
tgcagcccccagtggctgtgcattaagaaggccctgcgagtcgtgatgaccgaccccttt
actgagctggtcatcaccatctgcatcgtaatcaacactgtcttcttggccttggagcat
tacaaaatggaccagagttttgagtatatgttgtatacagggaatttggttttcactggc
attttcatggcagaaatgtgcctaaaaatcatcgcgctcgatccctacaactacttccgc
cgaggctggaacatttttgacagcatcgtcgctcttctgagttttgcagatgtgatgaac
agtgtggttgtaggaaaacaaagccctctgtttttccattccttaagagtgctaagggtt
ttcaagctagccaaatcctggccgactttaaacacactgataaagataattggtcactcc
gtcggagccctgggaaacctgaccgtggtcctggccattgtggtcttcattttctcagtt
gttggcatgcagctttttggctctaaattcaattctgtaaggaataacaccaaatcctgt
ggccctacagtcccatgtttacgacgctggcacatgggggacttctaccgttcctttctg
gtggtattccgcatcctctgtggagaatggatcgaaaacatgtgggaatgtatgcaagaa
actagtaaaccactgtgcgtcgtcgtctttctgttgatcatggtgataggaaaactcgtg
gtactcaacctcttcattgccttgctgctcaattccttcagtaatgaggagagggatgga
agcttggttggagaggccaaaaaaaccaaagtccagttagccctggatcggttccaccgg
gctttttgctttgtaatccacactcttgtgcgtttttgtcacacgtggtgcaggaggcaa
acgttaccgcagcaaaaagaggtgtcgggaggccctcctgccaaaagcaaagacatcatt
ccactggtcgcaggggtgaaaaggggctcggagacctgggaggagttcggtgtagtcacg
tctgcaccaaagaccttgagtgtagaccatgaccggacttggttggccccacttgcagag
gaagaggatgattttgaatcttctggcaaaatcaatgcacagtgcgttgcaccacctgag
gctggaaaacaggcctatgaactccctcgggagaccaagacgtctaccagcccaggagct
caaagtgtggaaatcgatgtgttctctgaaggtgacatttatctgtcagcacagaacccc
cgaaagaagtctgataccaccagtgttttctcagaatgtagcaccattgatccacaggat
ccttttgcaaggataccggaaatggttcccaaaaaagaaccagagagatgttttcccaaa
ggcctgggtcactgcttcccatgctgtgccacggacaagagaaagtcccactggatcatt
tggtggaacctgcggaaaacctgctaccaaatagtgaaacacagttggtttgagagcttt
gttatctttgtgattctgctgagcagtggggcactggtatttgaagatattcaccttgag
aaacgacccaatatccaagcattacttaattgtactgaccatattttcacctacattttt
atcctggagatgggtctaaaatgggtagcctttggatttgggaagtatttcaccagtgtc
tggtgctggcttgacttcatcattgtaattgtctctgtgaccagtctcatcgacctaaag
agcttgaagtccttcaggactctacgagcactgaggcccctgcgcgcactgtcccagttt
gaaggaatgaaggtggtcgtcaatgctctcataggtgctatacctgccattctgaatgtt
ttgcttgtctgcctcattttctggctcatattttgtatcctgggagtaaacttcttctct
ggaaaatttggaagatgcattaatgtatcagatacaaactcagttataaattacagcgtc
gtcgcaaaccaaagtcaatgcgaaagtggaaatttctcttgggtcaccccgccggtcaac
tttgacaatgtgggaatggcttaccttgccctcttgcaagtggcaacatttaagggctgg
atggatatcatgtatgcagctgtcgattccagagggaaagaactacagccagggtttgag
gagaacccacaaaactaccttttcttcgtggcttttatcatctttggctcattctttact
ctgaatctcttcatcggtgttattatcgacaacttcaaccaacagcagaaaaagataagt
ggtgaagatatttttatgacagaagaacagaagaaatactataatgcaatgaaaaaatta
ggatccaaaaaacctcaaaagcccattccgaggcctctgaataaatgccagggtctcgcg
ttcgacctggtcacaaaccaggtctttgacgtcatcatcatcatcctcattttcctcaac
atggttatcatgatggctgaatcaaataaccatcccgaagatacaaaagccatccttgag
gatctcaacctggcctttgtggtcatctttacaattgagtgtctcatcaaaatctttgct
ttgaggcaatactacttcaccaatggctggaacttattcgactgtgtgatcgtggttctc
tctattgttagtgccatggtttctgccttggagaaccagcagcacattcccttccctcca
acgctcttcagagttgtgcgcttggctcggattggtcggatcctgagacttgttcgggca
gcacgaggaattagaaccctcctttttgctctgatgatgtcccttccctctctattcaac
atcggtcttctgctttttctggttatgtttatctatgccatttttggtatgaactgcttt
tgcaaagtgaaggaagggtttggaattgatgacatattcaacttcaagacttttgttggc
agcatactctgtctcttccagatcaccacctcggcaggctgggatgccctcctcaggccc
atgctgcaatcaaacgattcatgcaaccccaacttagacagccgtcacctccctgccata
gccatagcctactttgttagttacatcatcatttccttcctcattgttgtcaacatgtac
attgctgtgatcttagagaacttcaatactgccactgaagaaagcgaggaccctttgggt
gaagatgactttgaaatattctatgaagtctgggaaaagtttgacccagaagcaacacag
tttatcaagtatcctgccctttctgactttgccgatgcccttcctgagcctttacgggtg
gcaaagccaaacagatttcagttcctaatgatggacttgcccatggtgagtggagatcgc
ctccactgcctggatattctcttcgcgttcaccaccagggtacttggtgactccagcggc
ctggacagtatgaaagcaatgatggaggagaagttcatggaggccaacccttccaagaag
ttgtatgaacccatagtcaccaccaccaagaggaaggaagaggaaagatgtgctgctgtt
atccaaaaggcctttcgaaaatacaagctgaagatgtccatgtgtgccttagaagacggg
cctcgttcaccactccagacactctgcaatggagacctctccagctccggggtggccgag
ggcaaggtccactacgactga
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