KEGG   Panthera tigris altaica (Amur tiger): 102965530
Entry
102965530         CDS       T02988                                 
Symbol
NXF3
Name
(RefSeq) nuclear RNA export factor 3
  KO
K14284  nuclear RNA export factor
Organism
ptg  Panthera tigris altaica (Amur tiger)
Pathway
ptg03008  Ribosome biogenesis in eukaryotes
ptg03013  Nucleocytoplasmic transport
ptg03015  mRNA surveillance pathway
ptg05014  Amyotrophic lateral sclerosis
ptg05164  Influenza A
ptg05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ptg00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102965530 (NXF3)
   03015 mRNA surveillance pathway
    102965530 (NXF3)
   03008 Ribosome biogenesis in eukaryotes
    102965530 (NXF3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    102965530 (NXF3)
   05168 Herpes simplex virus 1 infection
    102965530 (NXF3)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    102965530 (NXF3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptg03019]
    102965530 (NXF3)
   03009 Ribosome biogenesis [BR:ptg03009]
    102965530 (NXF3)
Messenger RNA biogenesis [BR:ptg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102965530 (NXF3)
   mRNA cycle factors
    Stress granule specific factors
     102965530 (NXF3)
Ribosome biogenesis [BR:ptg03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    102965530 (NXF3)
SSDB
Motif
Pfam: Tap-RNA_bind NTF2 TAP_C
Other DBs
NCBI-GeneID: 102965530
NCBI-ProteinID: XP_007090582
LinkDB
Position
Un
AA seq 682 aa
MHRNSISFTISFFKEKGWGVCIHVGTILEMCETTCLTGESSERVVKLTDSQLLSLCSISR
SSKRIHASLMLTRRTAHDLGVWEDLYTQEEVTGDLLGGTLECGSAALPGSQCLSHPRCDV
DYFFKALQTMKELWDTLIPLTLSRWHNNTGNSLQRRARCSGIYRRRYNNWSGHVRSGIDS
SSHQQQDGDPATNDSCMSTRGRYAPYAIPSCHWRGSFQMQDQMQANMEGEQKGPETRMEG
ERQDETSRSWFKITIPFGIRYDEKWLLNLIQKQCSVPFTPVQFHYEKMQAQFFVENASSA
FALKSVNGKIWNENNEMISIFVHPSDAPQPVKKELKPENVDQIKLTTNKRCVVSXQSFNI
QKVRFAPDMVTRDIEMVPNPRNSMAASRQTHEKNMFKSAGELDKGKRLQREDMSANRSPL
CTTFPNKSTNISSILELFSKLLCLDGQESPSPTSIGIAAHKRLPTCKGSFFGSDALKSLV
LQFLQQYYLIYDSGDRQGLLGAYHDEACFSLTIPFNPKEPAPSSLCKYLKESRNMKKVQD
PYLRVQLLKHTKHDIVHSLCVLPKTQHDLSSFVVDIWCQTDLMLCFSVNGVFKEGECVEX
MSQDSVHAFTRTFIASPVNNYSLSIVHDDLFARDTRLKDTQNAFPITVPTPSCISCPXPQ
KQQEMVHTFITQSVMNFQWSQK
NT seq 2049 nt   +upstreamnt  +downstreamnt
atgcaccggaattccatcagcttcaccatcagcttcttcaaagagaagggctggggagtg
tgtatccacgtgggcacaatactggaaatgtgtgaaactacatgcctcacgggagagtct
tctgagagggtcgtcaaacttacagattcacagctcttgtccctctgcagtatctccagg
agctcaaagagaatacatgcttctttgatgttaacccgcaggactgcacatgacctgggt
gtctgggaagatctttatacccaggaagaggtgactggggatctgctgggagggacactg
gaatgcgggtcagcagctcttcctgggtctcagtgcctgagccatcccaggtgtgatgtg
gattacttctttaaagctcttcagacaatgaaggaactttgggacactttgattcctctc
accctctcccgatggcataataacacaggtaactccttacaaagaagagcaagatgctcg
ggtatttaccgaaggaggtataacaattggtctgggcatgtccgttctggcattgattct
tcatcccaccagcagcaagatggagatccagcaacaaatgacagttgcatgagcacccga
ggaagatatgccccctatgccattccatcctgtcattggagaggcagttttcagatgcaa
gaccaaatgcaagctaacatggagggagagcaaaagggtccagagacaagaatggagggg
gagaggcaggatgagacctccagaagctggttcaagatcacaattccatttggcatcaga
tatgatgagaagtggctgctgaatctgattcagaaacaatgcagtgtccccttcacccca
gtgcaatttcactatgagaaaatgcaggcccagttctttgttgagaatgccagcagtgcc
ttcgcattgaagagtgtcaacggcaagatctggaatgagaataatgaaatgatatctatc
tttgtccacccctctgatgcaccccagcctgtgaagaaggagctgaagccagaaaatgtg
gatcagataaagttgaccacaaacaaaagatgtgtagtctcctagcaatcttttaacatc
cagaaagtccgctttgcccctgacatggtcacccgagatattgaaatggtaccaaatcct
agaaacagcatggctgcctcccggcagactcatgaaaagaacatgttcaagtctgcaggg
gagttggacaagggcaaaagactgcagcgagaagacatgagtgcaaacagaagccccttg
tgcaccacctttcccaataaatcaaccaacataagctccatcctggaactgttttccaag
ttattgtgcctggatggccaggagtcaccttcaccaaccagcattggtattgcagcccac
aagaggttaccaacctgcaagggaagcttctttggatctgatgcgctgaagagtctggtc
ctgcaattcctgcagcagtactacttgatctatgactctggagatcgtcagggtctcctt
ggtgcttaccacgatgaggcctgcttctccctgaccattcccttcaaccccaaggagcca
gccccaagcagcttgtgcaagtacctcaaggaaagcaggaacatgaagaaggtccaggac
ccctacctgcgtgttcagctgctgaagcatacaaaacatgacattgtgcactccctctgt
gtgctgcccaaaactcagcatgacctcagctcctttgtggtggacatatggtgccagacg
gacttgatgctctgcttctctgtcaacggagtgttcaaggaaggtgagtgtgtagaatga
atgtctcaggattctgttcatgccttcacccggaccttcatcgctagccctgtcaacaat
tacagtctaagcatcgtgcacgatgacctgtttgcgagggacaccaggctcaaggacacc
cagaatgcattccctatcacagtgcccacaccttcctgcatctcttgccccnncccccag
aagcagcaggaaatggtgcatactttcataacccagtccgtaatgaacttccagtggtct
caaaagtga

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