Panthera tigris altaica (Amur tiger): 102965530
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Entry
102965530 CDS
T02988
Symbol
NXF3
Name
(RefSeq) nuclear RNA export factor 3
KO
K14284
nuclear RNA export factor
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg03008
Ribosome biogenesis in eukaryotes
ptg03013
Nucleocytoplasmic transport
ptg03015
mRNA surveillance pathway
ptg05014
Amyotrophic lateral sclerosis
ptg05164
Influenza A
ptg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102965530 (NXF3)
03015 mRNA surveillance pathway
102965530 (NXF3)
03008 Ribosome biogenesis in eukaryotes
102965530 (NXF3)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
102965530 (NXF3)
05168 Herpes simplex virus 1 infection
102965530 (NXF3)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102965530 (NXF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptg03019
]
102965530 (NXF3)
03009 Ribosome biogenesis [BR:
ptg03009
]
102965530 (NXF3)
Messenger RNA biogenesis [BR:
ptg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102965530 (NXF3)
mRNA cycle factors
Stress granule specific factors
102965530 (NXF3)
Ribosome biogenesis [BR:
ptg03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
102965530 (NXF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tap-RNA_bind
NTF2
TAP_C
Motif
Other DBs
NCBI-GeneID:
102965530
NCBI-ProteinID:
XP_007090582
LinkDB
All DBs
Position
Un
AA seq
682 aa
AA seq
DB search
MHRNSISFTISFFKEKGWGVCIHVGTILEMCETTCLTGESSERVVKLTDSQLLSLCSISR
SSKRIHASLMLTRRTAHDLGVWEDLYTQEEVTGDLLGGTLECGSAALPGSQCLSHPRCDV
DYFFKALQTMKELWDTLIPLTLSRWHNNTGNSLQRRARCSGIYRRRYNNWSGHVRSGIDS
SSHQQQDGDPATNDSCMSTRGRYAPYAIPSCHWRGSFQMQDQMQANMEGEQKGPETRMEG
ERQDETSRSWFKITIPFGIRYDEKWLLNLIQKQCSVPFTPVQFHYEKMQAQFFVENASSA
FALKSVNGKIWNENNEMISIFVHPSDAPQPVKKELKPENVDQIKLTTNKRCVVSXQSFNI
QKVRFAPDMVTRDIEMVPNPRNSMAASRQTHEKNMFKSAGELDKGKRLQREDMSANRSPL
CTTFPNKSTNISSILELFSKLLCLDGQESPSPTSIGIAAHKRLPTCKGSFFGSDALKSLV
LQFLQQYYLIYDSGDRQGLLGAYHDEACFSLTIPFNPKEPAPSSLCKYLKESRNMKKVQD
PYLRVQLLKHTKHDIVHSLCVLPKTQHDLSSFVVDIWCQTDLMLCFSVNGVFKEGECVEX
MSQDSVHAFTRTFIASPVNNYSLSIVHDDLFARDTRLKDTQNAFPITVPTPSCISCPXPQ
KQQEMVHTFITQSVMNFQWSQK
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgcaccggaattccatcagcttcaccatcagcttcttcaaagagaagggctggggagtg
tgtatccacgtgggcacaatactggaaatgtgtgaaactacatgcctcacgggagagtct
tctgagagggtcgtcaaacttacagattcacagctcttgtccctctgcagtatctccagg
agctcaaagagaatacatgcttctttgatgttaacccgcaggactgcacatgacctgggt
gtctgggaagatctttatacccaggaagaggtgactggggatctgctgggagggacactg
gaatgcgggtcagcagctcttcctgggtctcagtgcctgagccatcccaggtgtgatgtg
gattacttctttaaagctcttcagacaatgaaggaactttgggacactttgattcctctc
accctctcccgatggcataataacacaggtaactccttacaaagaagagcaagatgctcg
ggtatttaccgaaggaggtataacaattggtctgggcatgtccgttctggcattgattct
tcatcccaccagcagcaagatggagatccagcaacaaatgacagttgcatgagcacccga
ggaagatatgccccctatgccattccatcctgtcattggagaggcagttttcagatgcaa
gaccaaatgcaagctaacatggagggagagcaaaagggtccagagacaagaatggagggg
gagaggcaggatgagacctccagaagctggttcaagatcacaattccatttggcatcaga
tatgatgagaagtggctgctgaatctgattcagaaacaatgcagtgtccccttcacccca
gtgcaatttcactatgagaaaatgcaggcccagttctttgttgagaatgccagcagtgcc
ttcgcattgaagagtgtcaacggcaagatctggaatgagaataatgaaatgatatctatc
tttgtccacccctctgatgcaccccagcctgtgaagaaggagctgaagccagaaaatgtg
gatcagataaagttgaccacaaacaaaagatgtgtagtctcctagcaatcttttaacatc
cagaaagtccgctttgcccctgacatggtcacccgagatattgaaatggtaccaaatcct
agaaacagcatggctgcctcccggcagactcatgaaaagaacatgttcaagtctgcaggg
gagttggacaagggcaaaagactgcagcgagaagacatgagtgcaaacagaagccccttg
tgcaccacctttcccaataaatcaaccaacataagctccatcctggaactgttttccaag
ttattgtgcctggatggccaggagtcaccttcaccaaccagcattggtattgcagcccac
aagaggttaccaacctgcaagggaagcttctttggatctgatgcgctgaagagtctggtc
ctgcaattcctgcagcagtactacttgatctatgactctggagatcgtcagggtctcctt
ggtgcttaccacgatgaggcctgcttctccctgaccattcccttcaaccccaaggagcca
gccccaagcagcttgtgcaagtacctcaaggaaagcaggaacatgaagaaggtccaggac
ccctacctgcgtgttcagctgctgaagcatacaaaacatgacattgtgcactccctctgt
gtgctgcccaaaactcagcatgacctcagctcctttgtggtggacatatggtgccagacg
gacttgatgctctgcttctctgtcaacggagtgttcaaggaaggtgagtgtgtagaatga
atgtctcaggattctgttcatgccttcacccggaccttcatcgctagccctgtcaacaat
tacagtctaagcatcgtgcacgatgacctgtttgcgagggacaccaggctcaaggacacc
cagaatgcattccctatcacagtgcccacaccttcctgcatctcttgccccnncccccag
aagcagcaggaaatggtgcatactttcataacccagtccgtaatgaacttccagtggtct
caaaagtga
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