Panthera tigris altaica (Amur tiger): 102965922
Help
Entry
102965922 CDS
T02988
Symbol
COL4A2
Name
(RefSeq) collagen type IV alpha 2 chain
KO
K06237
collagen type IV alpha
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg04151
PI3K-Akt signaling pathway
ptg04510
Focal adhesion
ptg04512
ECM-receptor interaction
ptg04820
Cytoskeleton in muscle cells
ptg04926
Relaxin signaling pathway
ptg04933
AGE-RAGE signaling pathway in diabetic complications
ptg04974
Protein digestion and absorption
ptg05146
Amoebiasis
ptg05165
Human papillomavirus infection
ptg05200
Pathways in cancer
ptg05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102965922 (COL4A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102965922 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102965922 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102965922 (COL4A2)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
102965922 (COL4A2)
09154 Digestive system
04974 Protein digestion and absorption
102965922 (COL4A2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102965922 (COL4A2)
09162 Cancer: specific types
05222 Small cell lung cancer
102965922 (COL4A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
102965922 (COL4A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
102965922 (COL4A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
102965922 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptg04147
]
102965922 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
ptg00536
]
102965922 (COL4A2)
Exosome [BR:
ptg04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
102965922 (COL4A2)
Glycosaminoglycan binding proteins [BR:
ptg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102965922 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
102965922
NCBI-ProteinID:
XP_015400130
LinkDB
All DBs
Position
Un
AA seq
1717 aa
AA seq
DB search
MPAEPARSWRSLSLPLSPSRWLLLGAVTVGILAQSVLAGVKKFDVPCGGRDCSGGCQCFP
EKGGRGQPGPVGPQGYTGPPGLQGFPGLQGRKGDKGERGSPGITGPKGDVGARGVSGFPG
ADGIPGHPGQGGPRGPPGHDGCNGTRGDVGHQGPVGPGGFIGPPGPQGPKGQKGEPYALS
SVDRDKYRGEPGEPGLVGFQGPPGRHGPMGQMGPVGAPGRPGPPGPPGPKGQPGNRGLGF
YGQKGEKGDMGQPGPNGIPSDIHHAIIGPMKEMFHPDQYKGEKGSEGEPGRKGIALKGEE
GVMGFSGTRGSPGLDGEKGSPGQKGSKGLDGYQGPDGPPGLKGEVGDRGPPGAPAYSPHP
SLAKGVRGDPGFPGAHGEPGSRGEPGDPGPPGPPGTSIGDEDGKRGLPGEMGPKGFIGDP
GIPALYPGPPGTNGKPGPRGPPGPPGLPGPDGFLFGLKGAEGNVGYPGPSGFPGARGQKG
WKGDAGDCKCAEGDQFIGGLPGPPGPKGLPGINGEPGKKGSQGDPGQHGIPGFPGFKGAP
GNVGPPGPKGVKGDSRAITTKGERGQPGVPGVPGLKGDDGVPGRDGLDGFPGLPGPPGDG
ITGPPGDTGYPGTPGTKGAPGERGPRGLGLPGPKGERGFPGDVGSPGPPGFPGPAGPPGA
PGQIDCDTGVKRPIGDDGQKTVRPDCVGGPKGAPGLRGPPGPTGAKGLQGIPGPSGADGV
PGLKGLPGDPGREGFPGPPGFVGPRGSKGVAGLRGPDGHPGPTGLPGPVGPPGDRGLPGE
VLGAQPGPRGDAGLPGHPGLKGPPGERGPPGFRGSQGMPGMPGLKGRPGFPGPSGQPGLP
GPPGLHGFPGAPGQEGPLGLPGAPGRGGLPGDRGDPGDIGIPGPVGMKGLSGDRGDPGLL
GERGPPGGPGFKGMSGIPGVPGPKGSRGSPGMDGFQGMVGLKGRAGLPGNKGEAGFFGIP
GLKGLAGEPGVKGSRGDPGPPGPPPIIQPGMKDIKGEKGDEGPMGLKGYLGLKGVPGMPG
IPGLSGIPGLPGKPGHIKGVKGDIGVPGVPGLPGFPGVPGPPGIIGFPGFTGSRGDKGAP
GRAGLYGEVGPTGDFGDIGDTIDLPGSPGLKGERGVAGAPGLKGFFGEKGTEGEVGFPGI
TGVPGVQGPPGPKGQAGFPGLTGLQGPQGEPGRAGAPGDKGDYGWPGGPGSPGFPGIRGI
SGLHGLPGTKGFPGSPGVDAHGDPGFPGPAGDRGDPGEANTRPGPVGAPGQKGEQGNPGE
RGPVGSPGLQGFPGITPPSNISGSPGDKGAPGIFGPEGYRGPPGPPGPAALPGRKGDEGN
PGAPGNPGTKGWGGDPGPQGRPGVFGLPGVKGPRGEPGLMGNTGATGSVGDPGPKGPKGD
RGLPGAPGSMGSPGIVGIPQKITVQPGPVGPHGRRGPPGAQGEMGPQGPPGEPGFRGAPG
KAGPQGRGGISAVPGFRGDQGPMGQQGPIGQEGEAGRTGXXXXXXSPGRSVSIGYLLVKH
SQTDQEPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVC
YYASRNDKSYWLSTTAPLPMMPVAEDEIKPYISRCSVCEAPAVAIAVHSQDVSIPHCPAG
WRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGGRGTCHYYANKYSFW
LTTIPERSFQGSPSADTLKAGLIRTHISRCQVCMKNL
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgagccggcgcgctcatggcgctccctctccctccctctctctccctccagg
tggctgctgctgggggctgtgacagtggggatcctggcccagagcgtcctggcgggcgtg
aagaagttcgacgtgccctgcgggggcagagactgtagcgggggctgccagtgtttccct
gagaaaggagggcggggccagccagggccagtgggcccccaggggtacaccgggccccca
ggcctgcagggattcccaggactgcagggccgcaaaggtgacaagggcgagagggggtca
ccggggatcacaggaccgaaaggagatgtgggagcaagaggcgtttccggattccctggt
gccgacggaattcccggacacccggggcaaggtgggcccagagggccacctggtcacgat
ggctgcaacgggacgagaggagacgtgggccaccagggacccgtcggccccggggggttc
attggccctcctgggccccaaggacccaaggggcagaaaggtgagccgtacgcgctttcc
agtgtggaccgcgacaaatacaggggtgaacctggggagcctggattggtcggtttccag
gggcctcctggccgccacgggcctatgggacagatgggtccggttggagctccaggaaga
ccaggcccgcctggaccccctggacctaaaggacagccgggcaacagaggacttggtttt
tatggacagaagggagagaagggtgacatgggacagccgggacccaatgggattccatca
gacatccaccatgccatcatcgggcccatgaaggagatgttccacccagatcagtataag
ggcgaaaaggggagtgagggggagccgggaagaaagggcatcgccttgaagggagaagaa
ggagtcatgggcttctcgggcacacggggttctcctggcctcgatggcgagaaaggttca
ccaggacaaaagggaagcaaaggactggatggttatcaaggcccggatggacccccggga
ctcaagggagaagtgggcgaccgcggccccccaggtgcccctgcgtactcgcctcatccc
tccctggccaaaggtgtcaggggtgacccaggattcccaggggcccacggggagccagga
agccggggtgaaccaggagacccgggcccaccaggcccccctggcacgtccatcggagac
gaagatggcaagagaggtttaccaggtgaaatggggcccaaaggcttcataggagaccca
ggcatccccgcgctgtaccccggccctccgggaaccaacggaaagccagggccccgagga
ccgccagggcctcccggactacctgggccagacggtttccttttcggccttaaaggagcg
gaaggaaatgtgggctaccctggcccttctggtttcccgggggctcgcggacagaaaggc
tggaaaggtgacgctggggactgtaagtgcgcagaaggcgaccagttcatcgggggcctc
ccggggccaccaggacccaagggccttccaggcatcaacggggagcctgggaagaaaggg
agccagggagaccccggccagcatggcatccctgggttcccagggttcaagggcgcccct
ggcaacgtcgggcctccagggcccaaaggggtgaagggcgattctcgggcaatcaccacc
aaaggtgagaggggacagccaggtgtcccaggcgtgcctggcctgaaaggtgacgacggt
gtcccagggcgtgatgggctggatggattcccaggcctcccaggcccccctggtgacggc
atcacaggccccccaggggacaccggttacccaggaacaccgggcacgaagggcgctcca
ggagagaggggcccccggggattgggcctgcccggccccaaaggcgagcgcggtttcccc
ggagatgtgggatcacctggaccaccaggctttcccgggcccgctggtcccccgggtgct
cccggacagatagactgcgatacaggtgtgaaaaggcccatcggagatgacggacagaag
accgtgcggccagattgcgtcggaggacccaagggagcgccaggcctgcggggaccccca
ggccccacaggtgccaagggcctccaagggataccaggaccctcaggagctgacggagta
ccggggctcaagggtctcccaggagacccaggtcgtgaaggattcccaggacccccaggg
ttcgtggggccccgaggatccaaaggcgtggcgggcctccgtggcccagatgggcaccca
ggtcccaccggtctgccggggcccgtcgggcccccaggggacaggggccttcccggagaa
gttctgggagcccagcctgggcccaggggagatgctgggctccccggacaccctgggctg
aaaggccctccgggagagagaggtccacctggattccggggaagccagggcatgccggga
atgccaggcctgaagggccggccgggcttcccaggaccctcgggccagccaggcctgccc
gggccaccaggactgcatggcttcccaggagctcctggccaggaggggcccttggggctg
ccaggcgccccaggccgcggaggtctgcctggggacagaggggacccaggtgacataggc
atccccggccctgtgggcatgaagggtctttctggcgacagaggtgaccctggtttgttg
ggtgagaggggtcccccaggaggccccggatttaaaggaatgagtggaattcccggtgtc
cccggacccaaaggcagtagaggttcacccgggatggacggtttccaaggcatggttggg
ctcaagggaagagctgggcttccgggaaacaaaggagaggccggattttttggaattcca
ggactgaagggtctggctggtgagccaggtgtgaaaggcagccgcggggacccggggccc
ccaggaccacctcccatcatccagccaggaatgaaagacatcaaaggggagaaaggagac
gaggggcctatggggttgaaaggctacctgggcctaaaaggtgtcccggggatgccaggg
atccccgggctgtctggaatccccggcttgccagggaagccgggccacatcaaaggagtc
aaaggagacatcggagtcccaggcgtgcccggattgccaggattccccggcgtgcccggc
ccccccggaatcatcgggtttcccgggttcacaggaagtcggggcgacaagggagctccg
gggagagcgggtctttacggcgaggttggccccacaggtgatttcggtgacattggagac
accatagacctgccaggaagcccaggcctgaagggggagcggggcgtcgctggagcacca
ggtctaaagggattctttggggaaaaaggaacggagggtgaagtcggcttccctgggata
acaggcgtgccaggcgtccaaggccctccaggacctaaagggcaagcaggcttcccagga
ctgacagggctacaggggccgcagggagagccagggcgggcaggagcgcccggtgacaaa
ggagactatggctggcccgggggcccaggctcaccaggttttccgggcatccgaggcatc
agcggactccacggcttgccaggcaccaaaggctttccaggatccccaggtgtggacgcc
cacggagaccccggctttcccggtcctgccggggacaggggtgacccaggagaggccaac
acccgcccaggccctgtcggagccccaggacagaaaggggagcaaggaaatccaggggaa
cgaggcccagtcgggagtccgggacttcagggatttccaggaatcaccccaccttccaac
atctctgggtcacctggtgacaaaggggcgccgggcatatttggcccagaaggttatcga
gggcccccggggccacctggacctgctgctctccctggaaggaaaggagacgagggcaac
ccaggagccccaggaaaccccgggaccaaagggtggggcggggaccccgggccccagggc
cggcctggcgtgttcgggctcccgggagtaaaaggacccagaggggagccaggactcatg
ggaaacacaggagccaccgggagtgtgggcgacccaggccccaaggggcccaaaggagac
aggggactcccaggtgcccccggttctatgggatcccctgggattgtgggaatcccccag
aagatcaccgtccagccagggccagtgggtccacacggaaggagaggccccccgggggca
cagggagagatggggccccagggccccccaggagagccaggtttccgcggggctccaggg
aaggcagggccccagggaagaggtggcatttctgctgttcctggattccgaggagaccag
gggcccatgggacagcaggggcccatcggccaggaaggggaggccggccgcacggggnnn
nnnnnnnnnnnnnncagcccgggccgcagcgtcagcatcggctacctcctggtgaagcac
agtcagacggaccaggagcccatgtgccccgtgggcatgaacaagctctggagtgggtac
agcctgctgtactttgaaggccaggagaaggcgcacaaccaggacctggggctggcgggc
tcctgcctggctcggtttagcaccatgccctttctgtactgcaacccgggtgacgtgtgc
tactacgccagccgcaacgacaagtcctactggctctccaccacggccccgctgcccatg
atgccagtggccgaggacgaaatcaagccttacatcagccgctgttccgtgtgtgaggcc
ccagccgtcgccatagcggtacacagtcaagatgtctccatcccccactgcccagctgga
tggcggagtctgtggattggatattctttcctcatgcacacggcggccggcgacgaaggc
ggtggccagtcgctggtgtctccgggcagctgcctggaggacttccgcgcgacgcccttc
atcgagtgcaacgggggccgtggcacctgccactactacgccaacaagtacagcttctgg
ctcaccaccatccccgagcgcagtttccagggctcgccgtccgccgacaccctcaaggcg
gggctcatccgcacgcacatcagccgctgccaggtgtgcatgaagaacctgtga
DBGET
integrated database retrieval system
