Panthera tigris altaica (Amur tiger): 102967260
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Entry
102967260 CDS
T02988
Symbol
SF3B3
Name
(RefSeq) splicing factor 3b subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102967260 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptg03021
]
102967260 (SF3B3)
03041 Spliceosome [BR:
ptg03041
]
102967260 (SF3B3)
03036 Chromosome and associated proteins [BR:
ptg03036
]
102967260 (SF3B3)
Transcription machinery [BR:
ptg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
102967260 (SF3B3)
Spliceosome [BR:
ptg03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
102967260 (SF3B3)
Complex B
102967260 (SF3B3)
Complex C
U2 SnRNP specific factors
102967260 (SF3B3)
Chromosome and associated proteins [BR:
ptg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
102967260 (SF3B3)
TFTC complex
102967260 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
102967260
NCBI-ProteinID:
XP_007074955
LinkDB
All DBs
Position
Un
AA seq
1214 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGWGRLXFLSG
TPGGGAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENPMFA
CLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPGGSD
GPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFFFLA
QTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIAH
LGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDTPQL
YVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATL
VLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPGKKT
IVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSR
FLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIGFL
YLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSY
SYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQY
TPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFL
NENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGDDW
YVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGV
GKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQLII
FADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLN
GASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQH
VEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPE
VSKKLEDIRTRYAF
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgtttctatacaacttgaccttgcagcgagccactggcatcagctttgccattcatggc
aacttctctggaaccaaacaacaggaaatagttgtttcccgtgggaagatactggagctg
cttcgtcccgaccccaacactggcaaagtacacactctactaactgtggaagtatttggt
gttatccggtcactcatggcctttaggctgacgggtggcaccaaagactacattgtggtt
ggcagtgactcaggtcggattgttatcctggaataccagccatctaagaatatgtttgag
aaaattcaccaagaaacctttggcaagagtggatgggggcggctgnnttttttgtcgggg
accccgggggggggagccgttatgattagtgccattgaaaaacagaaattggtatatatc
ttgaacagagacgctgcagcccggcttaccatttcatctcccttggaagcccacaaagcg
aacactttagtatatcatgtggttggagtagatgtaggatttgaaaatccaatgtttgct
tgtctggaaatggattatgaggaagcagacaatgatcccacaggggaagcagcagctaat
acccagcagacgcttactttctatgagttagaccttggtttaaatcatgtggtccgaaaa
tacagtgaacctttggaggaacatggcaactttcttattacagttcccggagggtcagat
ggtcccagtggagtgctgatctgctctgaaaactatatcacctataagaactttggtgac
caaccagatatccgctgtccaattcccaggagacggaatgacctggatgaccctgaaaga
ggaatgatttttgtttgctctgccacccataagaccaaatcgatgttcttctttttggcc
caaactgagcagggagatatcttcaagatcactttggagacagatgaagatatggttact
gagattcggctcaagtattttgatactgtgcctgttgctgctgccatgtgtgtgcttaaa
acaggcttcctttttgtagcatcagaatttggaaatcattacttataccaaattgcacat
cttggagatgatgatgaagagcctgagttttcatctgccatgcctctggaagaaggagac
acgttcttcttccagccaagaccacttaaaaaccttgtgctggtcgatgagttggacagc
ctctctcccattttgttttgccagatagctgatctggccaatgaagacacaccacagctc
tatgtggcctgcggtaggggaccccgatcatctctgagagtcctacggcacggacttgag
gtgtcagaaatggctgtctctgagttacccggtaaccccaatgctgtctggacagtgcgt
cggcacattgaagatgagtttgatgcctatatcattgtgtctttcgtgaacgccacactt
gtactatccatcggagagactgtggaagaagtgactgactctgggttcctgggcacaacc
ccaaccttatcctgctccttgttaggagatgatgccttggtacaggtgtatcctgatggc
attcggcatataagagcagacaagcgagtcaatgagtggaagacccctgggaagaaaacg
attgtgaaatgtgctgtgaaccagcgacaagtggtgattgccctgacaggaggagagctg
gtctattttgagatggatccttcaggacagctgaatgagtacacagagcggaaggagatg
tcagccgatgtggtgtgcatgagtctggccaacgtgcctcctggagagcagcggtctcgc
ttccttgctgtggggctggtggacaatactgtcagaatcatctccctggacccctcagac
tgtttgcagcctctgagcatgcaagctctcccagcccagcctgagtccttgtgtattgtg
gaaatgggtgggactgagaagcaagatgagctgggtgagaggggctctattggcttccta
tacttgaatattgggttacagaatggtgtgctgctgagaactgtcctggaccccgtcact
ggggatctgtctgacacccgcactaggtacctggggtctcgtcctgtgaaactctttcgt
gtccggatgcaaggccaagaggcagtgttggccatgtctagccgctcgtggttgagctat
tcttaccagtctcgtttccatctcacccccttgtcttatgagaccctggaatttgcgtct
ggcttcgcctctgaacagtgtcccgagggcattgttgccatctccaccaataccctgagg
attttagcattggagaagctaggtgctgtcttcaatcaggtagcctttccattgcagtat
acacccaggaaatttgtcattcacccagagagtaacaaccttatcatcattgagacagac
cacaatgcctacacagaagctacaaaagctcagagaaagcaacagatggcagaggaaatg
gtagaagcagcaggggaggacgagcgggagcttgctgcagagatggcagcagcgttcctg
aatgaaaacctccctgaatccatttttggagctcctaaggctggcaatgggcagtgggcc
tctgtgatccgagtcatgaatcctattcaagggaacacactagaccttgtccagctagaa
cagaatgaggctgcttttagtgtggctgtttgtaggttctccaatactggtgatgattgg
tatgtgttggtgggcgtggccaaagacctgatactcaatccccggtctgtagcagggggc
tttgtctatacctacaagcttgtgaacaatggggaaaaattggagtttttgcacaagact
ccagtggaagaggtccctgctgccattgccccattccaggggagggtgttgattggtgtg
gggaagcttctgcgagtctatgacttggggaagaagaagttactccgaaagtgtgagaac
aagcatattgccaattacatctctgggatccagactattggacacagggtaattgtgtct
gacgtccaagaaagtttcatctgggttcgatacaagcgtaatgagaaccagctcatcatt
tttgctgatgatacttacccacgatgggtcactacggctagccttctggactatgacact
gtggctggggcagataagtttggcaacatttgtgtggtaaggctcccacctaacaccaat
gatgaagtggatgaggatcccacaggaaacaaagccctgtgggaccggggcttgctcaat
ggggcctctcagaaggcagaggtgatcatgaactaccatgtaggcgagacagtgctgtca
ttacagaagaccacactgatccccggaggctcagaatcgcttgtctataccaccttgtca
ggaggaattggcatccttgtcccattcacatcccatgaggaccatgacttcttccagcat
gtggaaatgcacctacggtctgagcatccccctctctgtgggcgagaccacctcagcttt
cgttcctattacttccctgttaagaatgtgatagacggagacctctgtgagcagttcaac
tccatggagcccaacaaacagaagaatgtctctgaagaactggaccgaaccccacctgag
gtgtccaagaagcttgaggacatccggacccgttatgccttctga
DBGET
integrated database retrieval system