Panthera tigris altaica (Amur tiger): 102967358
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Entry
102967358 CDS
T02988
Symbol
LMO7
Name
(RefSeq) LIM domain 7
KO
K06084
F-box protein 20
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg04517
IgSF CAM signaling
ptg04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102967358 (LMO7)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
102967358 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptg04121
]
102967358 (LMO7)
Ubiquitin system [BR:
ptg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
102967358 (LMO7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ
PDZ_2
PDZ_6
CDR2_C
Prominin
Motif
Other DBs
NCBI-GeneID:
102967358
NCBI-ProteinID:
XP_007075172
LinkDB
All DBs
Position
Un
AA seq
1807 aa
AA seq
DB search
MEEAGADCALAFAEAQRWVEAVTEKNFETKDFRASLENGVLLCDLINKLKPGVIKKINRL
STPIAGLDNINVFLKACEQIGLKEAQLFHPGDLQDLSNRVTVRQEETDRRVKNVLITLYW
LGRKAQSNPYYNGPYLNLKAFENLLGQALTKALEDSRCLKRSGRDSGYGDIWCAERGEFP
TPPGNHKREDSFESLDSLGSRSFTSCSSDITLRGGREGCESDTDSEFPSKMQDYNKDDMS
YRRISAIEPKSALPFNRFLPNKSRQPSYVPAPLRKKKPDKYEDNRRSWASPVYTEADGTF
PSGHTENPLISHQISKAEWDFSNAASCQKEVYGSESGSDSEDERRLPDVVLDDLANRRFQ
VKKRPECFISKTTSPSSYSQRFSPADPLATGLYELTSNERRTWGTNVENWPTVQETSNSS
CYLEEKEAKTSTPNTVKDDLYVRKLSPIMPNPGHAFDQFLPKCWIPEDVNWKRIKRETYK
PWYKEFQGFSRRNSDSEDEDSGSHRSSSIFSRIQKAKRRLDSNCQRRSLLLELATRGAKN
SWDTQAARRASGASDEPSQFLLLQALQTYSDDILSSETNTKIDPTAGPRLITRRKNLFSA
PGYKRDDLEMSTLDPDLENDDFFVRKTGAFHANPYVLRAFEDLRRFSEQDDPVERDIILQ
CREGELVLPDLEKDDMVVRRLPAQKKEVPLSGAPDRYQPVPFPEPWTLPPEIQAKFLCVL
ERTRPSKEKRKSCRVLVPSYRQKKDDLLTRKIQSWQLGTTVPPVSFIPGPCSEADLQRWE
AIREASRLRHKKRLMVERLFQKIYGENGSKSMSDVSADDVQNLRQLRYEEMQKIKSQLKE
QDQKWQDDLAKWKDRRKSYTSDLQKKKEEREEIEKQALEKSERSSKTFKEMLQDRESRNQ
TSAVVSRRRLHSSDDILHEEKLSPRLTTSEASYQSERVEEKETTYSAEVPKQDSTTFAKR
EDAAAAEIQLSSQSPMEEQHPDPLSSQHSPSTQTESTRISASLPRSYQKTDTARLTSVVM
PRPFGSQARGISSLPRSYTMDDGWKYNGDVEYVKRIQSSLVSTSVHKPDTSQLATSKSSE
REGVTVGEGVMQLPSPTLSFSSLSQEEAATSKATLSSPSGPDLMSELGEGGSSPQTEVSR
SSQDQFSDMRISIHQTPGSGLDFGFTVKWVFSGIFVASIEAGSPAEFSQLQVDDEIIAVN
NTKFSYKDTKEWEATMANAQETGNLVMDIRRYGKSDWGRDQPSLPFTRHKTLNLTSMATK
IIGSPETKWIDTTSGIYNSDKSSNLSVTTDFSESLQHSNTESKEINGIRDESNTFESKAS
EPISLKNLKRRSQFFEQGSSDSVVPDLPVPTLSAPSRWAWDQEEERKRQERWQKEQDRLL
QEKYQREQEKLREEWQRAKQEAERENYKYLNEELMVLNSNSISLTAREPAVASWEATWGE
GSKSSDREGTRAGEEERSQQQKEGADEDQRKKLQEQLTLEKERTPEEPQYQEGQEQKRHP
AEAEEHKHQAERERETSVRIYQYRRPIDSYDLPKREEKSPGLLPSDRNKSRSTTELDDYP
TNKNGSSKYLDRIGSTSSSQRSSKKEQVPSEAELERQQILQEMRKRTSLHNDNSWIRQRS
SSVNKEPICLPGIMRRGESLDNLDSPRSNSWKPSPWLNQSSGVHASSSVQDFSRPPPQLV
STSNRAYMRNPSSSVPPPSTGSVKTTTTPSPTPRSHSPSASQLGSQLRNRSVSGKRMCSY
CNNILGKGAAMIIESLGLCYHLHCFKCIACECDLGGSSSGAEVRIRNHQLYCNDCYLRYK
SGRPTAM
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggccggggccgactgcgccctggcgttcgccgaggcccagagatgggtggag
gcagtaacagagaagaattttgagacaaaggattttcgagcttctctagagaatggtgtt
ctgttgtgtgatttgattaataaacttaaacctggtgtcattaagaagattaatagactg
tccacaccaatagcaggtttggataatataaacgtttttttgaaagcttgtgaacagatt
ggattgaaagaagcccagcttttccatcctggggatctacaggatttatcaaaccgagtc
actgtcaggcaagaagagactgataggagagtgaaaaatgttttgataacactgtactgg
ttgggaagaaaagcacaaagtaacccctactataatggaccctatcttaatttgaaagca
tttgagaatcttttaggacaagctctgactaaggctcttgaagactccaggtgcctgaaa
aggagtggcagggacagtggttacggtgatatctggtgtgctgaacgtggagaatttcct
actcctccaggcaaccataagagagaagactcgtttgaaagcttggactctttggggtct
aggtcattcacaagctgctcctctgatatcacgctgagagggggacgtgagggttgcgaa
agcgacacagattctgaatttccatccaagatgcaggattataataaagacgatatgtcc
tatcgaaggatttcagctattgaaccaaaatctgctttaccattcaatcgttttttaccc
aacaaaagtagacagccatcctatgtgccagcgccgttgaggaagaaaaagccggacaaa
tacgaggataacagaagaagttgggcaagcccggtctatacagaagcggatggaacattt
ccaagtggacacacagagaatcctttaatttcccatcaaattagcaaagcagagtgggat
ttttccaatgcagcttcctgtcagaaggaggtatacggttctgaaagtggttcggactcc
gaggatgaacgaaggttgcctgatgtagttttggatgacttagccaaccgtagattccaa
gtgaaaaagaggcctgagtgtttcatctcgaaaaccacctctcctagctcttattcgcaa
aggttttctcctgctgacccattagccactgggctgtacgagttgacgagtaatgagagg
agaacttggggtaccaatgtggagaattggccaacagtacaagaaacttcaaactcctct
tgttacttggaagagaaagaagcaaagacaagtacacccaacaccgtaaaggatgatctt
tatgtgcgaaagctaagtccaatcatgccaaacccagggcatgcttttgatcagtttctt
cccaaatgttggatcccagaagatgtgaactggaaaagaataaaaagagaaacttacaaa
ccatggtataaagaatttcagggattcagtaggaggaattcagattctgaggatgaggat
tcaggctctcacagaagctcctccatttttagtagaatccaaaaagcaaagcgtaggcta
gacagcaactgccaaagacgttcactcttgctggaactggctaccagaggggccaagaac
tcctgggacacccaagcagccaggagagccagtggtgcctcggacgagcccagtcagttt
ttattacttcaggccctccaaacatattctgatgacatcttgtcttctgaaacaaatacc
aaaattgatcccactgccggccccaggctcataacacgcagaaagaatctcttttctgca
ccagggtataaaagagatgacctcgagatgtcaaccctagaccctgatttagagaatgat
gatttctttgtcagaaagactggtgctttccatgcaaatccgtatgttctccgggctttc
gaggatcttagaaggttttctgagcaagatgatcctgtcgagcgagatataattctgcag
tgtagagaaggtgaacttgtacttccggatctagaaaaagatgatatggttgttcgccga
cttccagcacagaaaaaagaggtgcctctgtcaggggccccagacagataccagccagtt
cctttccctgaaccctggactcttcctccagaaattcaagccaagtttctgtgtgtactt
gaaagaacacgcccatccaaagaaaaaagaaagagctgtagagtgttagtgccttcctac
cggcagaagaaagatgacctgttgactcgcaagatccagtcctggcagctggggacgacc
gtgcctcccgtcagcttcatccctggcccctgcagcgaggcagacctgcagaggtgggaa
gccatccgggaggccagcagacttaggcacaagaaacggctcatggtcgagagactcttt
caaaagatttatggtgagaatgggagcaagtccatgagtgatgtcagcgcagacgatgtt
cagaacttgcgtcagctgcgttatgaggagatgcagaaaataaaatcacaattaaaagaa
caagatcagaaatggcaagatgaccttgcaaaatggaaagatcgtcgaaaaagctacact
tcagatctgcagaagaaaaaagaagagagggaagaaattgaaaagcaggcacttgagaag
tctgagagaagctctaagacatttaaggaaatgctgcaggacagggaatcccgaaatcaa
acatctgcagttgtatcaagaaggaggttgcattcttctgatgatatcttgcacgaagaa
aagctttcccctagactgaccacgtcagaagcaagttaccagagtgaaagagtagaagag
aaggaaacaacgtattctgcagaagttcctaagcaagattctacaacttttgcaaaaaga
gaggacgctgcagcagctgaaattcagctttcttctcagagccccatggaagaacaacac
ccagaccctttgtcttctcagcattcaccgagtacacaaaccgagtcgactcgaatttca
gcctctctccccagaagttaccagaaaactgatacagccaggttaacatctgtggtcatg
cctagaccttttggctctcaggcaaggggaatctcatcactcccgagatcctacacgatg
gatgatggctggaagtataacggagatgttgaatatgtgaagagaattcagagcagtttg
gtcagcacctctgtgcacaaacctgacacgagccagcttgctaccagcaagtccagtgag
agagagggagtaacggtgggagaaggtgtgatgcagctgccctctcctaccctctccttc
tcatcgctttcccaggaagaggctgccacttctaaagccacactgtcttcaccatctggc
cctgacttaatgtccgagcttggagaagggggaagctcaccacagacagaggtctccaga
tcctcacaggatcagttcagtgatatgagaatcagcatacaccagacgcctgggagcggt
cttgactttgggtttacagtaaaatgggtgttttctgggatcttcgttgcgtcaattgaa
gcaggtagcccagcagaattttctcagctgcaggtagatgatgaaattattgctgttaac
aacaccaagttttcatataaggacacaaaagagtgggaggcgaccatggctaatgctcaa
gaaactggaaacctagtaatggatatcaggcgctatggaaagtctgactggggcagagac
caaccttccctgccatttacacggcataaaaccctcaatctcaccagtatggctaccaaa
attataggttcacctgaaacaaagtggattgatacaacttctggaatttacaactcagac
aaatcttcaaatctgtcagtaacgactgatttctcagaaagcctccagcattctaatact
gaatccaaggaaataaatggaattcgtgatgaaagtaatacttttgaatcaaaagcatct
gaacctatttctttgaaaaacttaaaaaggcgatcacaattttttgaacaaggaagctcc
gattctgtggttcctgatcttccagttccaaccctcagtgccccgagtcgctgggcatgg
gatcaagaggaggagcggaagcggcaggagcggtggcagaaggagcaggaccgccttctg
caggaaaaatatcaacgtgagcaggagaaactcagggaagagtggcaaagggctaagcag
gaagctgagagagagaattacaagtacttgaatgaggagctgatggtcctgaactcaaac
agcatttctctgactgcacgggagcctgccgttgccagctgggaagccacctggggcgag
gggtccaagtcctccgaccgggaaggaacccgagcaggagaagaggagaggagccagcag
caaaaggagggtgcggacgaggaccagagaaagaagctgcaggagcaactaactcttgag
aaagagaggacaccggaggagccacagtatcaggaagggcaggagcagaagaggcatccg
gcggaggccgaggagcacaagcaccaggcagagagagagagggaaacttcagtcagaata
taccagtatagaaggccaattgattcctatgatctaccaaagagagaggaaaaatcccca
gggttgcttcctagtgacaggaataaatccagatccactactgaactggatgattaccct
acaaataaaaatggaagcagtaaatatttagaccgaattgggagcactagctcatcacag
aggagctccaagaaggaacaggtgccgtcagaagcagagttagagagacagcaaatcctt
caagaaatgaggaagagaacatctcttcacaatgacaacagctggatccgacagcgcagt
tccagtgtcaacaaggagcccatttgtctgcctgggattatgagaagaggtgaatctcta
gataacctggattccccaagatccaattcttggaaaccatccccttggctcaatcagtct
tcaggagtccatgcttcctcctccgttcaagacttcagtcgcccaccacctcagctggtg
tccacgtcaaaccgtgcctacatgcggaatccatcctccagcgttccccctccttccact
ggttctgtgaagaccaccaccacgccttctcccacaccacgcagccattctccttcagca
tcacagctgggctcccagctacgcaacaggtcagtcagtgggaagcgcatgtgctcctac
tgtaataacattctgggcaaaggagccgccatgatcatcgagtccctgggtctttgttat
catttgcattgttttaagtgcattgcctgtgagtgtgacctcggaggctcctcctcagga
gctgaagtcagaatcagaaaccaccaactgtactgcaatgactgctatctcagatacaaa
tctggacggccaaccgccatgtga
DBGET
integrated database retrieval system
