Panthera tigris altaica (Amur tiger): 102967512 Help Entry 102967512         CDS       T02988                                  Symbol COL1A1 Name (RefSeq) collagen type I alpha 1 chain   KO K06236   collagen type I alpha Organism ptg  Panthera tigris altaica (Amur tiger) Pathway ptg04151   PI3K-Akt signaling pathway ptg04510   Focal adhesion ptg04512   ECM-receptor interaction ptg04611   Platelet activation ptg04820   Cytoskeleton in muscle cells ptg04926   Relaxin signaling pathway ptg04933   AGE-RAGE signaling pathway in diabetic complications ptg04974   Protein digestion and absorption ptg05146   Amoebiasis ptg05165   Human papillomavirus infection ptg05205   Proteoglycans in cancer ptg05415   Diabetic cardiomyopathy Brite KEGG Orthology (KO) [BR:ptg00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     102967512 (COL1A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     102967512 (COL1A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     102967512 (COL1A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     102967512 (COL1A1)  09150 Organismal Systems   09151 Immune system    04611 Platelet activation     102967512 (COL1A1)   09152 Endocrine system    04926 Relaxin signaling pathway     102967512 (COL1A1)   09154 Digestive system    04974 Protein digestion and absorption     102967512 (COL1A1)  09160 Human Diseases   09161 Cancer: overview    05205 Proteoglycans in cancer     102967512 (COL1A1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     102967512 (COL1A1)   09174 Infectious disease: parasitic    05146 Amoebiasis     102967512 (COL1A1)   09166 Cardiovascular disease    05415 Diabetic cardiomyopathy     102967512 (COL1A1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     102967512 (COL1A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ptg00536]     102967512 (COL1A1) Glycosaminoglycan binding proteins [BR:ptg00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    102967512 (COL1A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI IL8 Motif Other DBs NCBI-GeneID:  102967512 NCBI-ProteinID:  XP_015395059 LinkDB All DBs Position Un AA seq 1231 aa AA seqDB search MFSFVDLRLLLLLAATALLTHGQEEGQEEEDSPGGPAGPPGRDGIPGQPGLPGPPGPPGP PGPPGLGGNFAPQMSYGYDEKSAGGISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPG EPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRG FSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNGGAPG AAGPPGPTGPAGPPGFPGAVGAKGEAGPQGARGSEGPQGVRGEPGPPGPAGAAGPAGNPG ADGQPGAKGANGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTG PPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGEDG EAGAQGPPPPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSG ARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERG AAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGEAGPSGPAGPTG ARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPTGPPGPIG NVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPVGKEGGKGPRGETG PAGRPGEVGPPGPPRPARGGEPGKQGPSGSSGERGPPGPMGPPGLAGPPGESGREGSPGA EGSPGRDGSPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAGPIGP VGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGP RGPPGAAGSPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSGGFDFSF LPQPPQEKAHDGGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCR DLNRCHTSPDSILLGSTAGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPHVAQKNWY ISKNPKDKRHVWYGESMTDGFQFEYGGQGSDPADVAIQLTFLRLMSTEASQNITYHCKNS VAYMDQQTGNLKKALLLQGSNEIEIRAEGNSRFTYSVTYDGCTSHTGNWGKTVIEYKTTK TSRLPIIDVAPLDVGAPDQEFGIDIGPACFL NT seq 3696 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttgtggacctccggctcctgctcctcttagcggccaccgccctcctgacg cacggccaagaggagggccaagaagaagaagacagcccagggggacctgccggcccccct ggccgcgacggcatccctggacagcctgggcttcctggaccccccggccctcccggaccc cccggaccccctggcctcggaggaaactttgctccccaaatgtcttatggctacgatgag aagtcagctggaggaatctctgtgcctggccccatgggtccttctggtcctcgtggtctc cctggtccccctggcgcacctggtccccaaggtttccaaggcccccctggtgagcccggc gagcctggagcttcaggtcccatgggtccccgtggtccccctggtccccctggcaagaac ggagatgacggtgaagctggaaagcctggtcgtcctggtgagcgtgggcctcctggacct cagggcgcccggggattgcctggaactgctggccttcctggaatgaagggacacagaggt ttcagtggtttggatggtgccaagggagacgctggtcctgctggtcccaagggcgagcct ggtagccctggtgaaaatggagctcctggccagatgggtccccgtggtctgcctggtgag agaggacgccccggagcccctggccctgctggtgctcgtggaaatggcggtgctcccggt gccgccggcccccctggtcccactggccccgctggtcctcccggcttccctggtgctgtt ggtgctaagggtgaagccggtccccaaggagcccgtggctctgaaggtccccagggtgtg cgtggcgagcccggcccccccggccctgctggtgctgctggccctgctggaaaccccggt gctgacggacagcctggtgccaaaggtgccaacggtcccgctggtgaacgtggttctcct ggccctgctggccccaaaggttctcctggtgaagctggtcgccccggtgaagctggtctg cctggtgccaagggtctgaccggaagccccggcagccccggtccggatggcaaaactggt ccccctggtcccgctggtcaagatggtcgccccggacccccaggcccccccggtgcccgt ggtcaggctggtgtgatgggattccctgggcctaaaggtgctgctggagagcctggcaaa gcaggagaacgaggtgtccctgggccccctggcgctgttggtcctgctggagaagatgga gaagctggagctcagggaccccccccccctgccggccccgctggtgagagaggcgaacag ggccctgctggctctcccggattccagggtcttcctggccccgctggtcctcccggtgaa gcaggcaaacctggcgaacagggtgttcctggagatcttggtgcccccggcccctctgga gccagaggcgagagaggtttccctggtgaacgcggtgtgcaaggtccccccggtccagcc ggtccacggggagccaatggtgcccctggcaatgatggtgctaagggtgatgctggtgcc cccggagcccccggtagccagggcgctcctggccttcagggaatgcctggtgaacgaggt gcagctggccttcctggccctaagggtgacagaggcgatgccggtcccaaaggtgctgat ggttctcctggcaaagatggcgtccgtggcctgactggccccattggtcctcctggcccc gctggtgcccccggtgacaagggtgaagctggtcccagcggccccgctggtcccactgga gctcgtggcgcccctggagaccgtggtgagcctggtccccccggccctgctggcttcgct ggcccccctggtgctgatggccaacctggtgctaaaggcgagcccggagatgctggtgct aaaggcgatgctggtccccctggtcccgctggccccactggaccccccggccccatcggc aacgttggtgctcctggacccaaaggtgctcgaggcagtgccggtccccctggtgctact ggtttccctggtgctgctggccgagtcggtcctcccggcccctctggaaacgctggaccc cctggccctcccggccctgtcggcaaagaaggcggcaaaggcccccgcggtgagactggc cccgctgggcgtcccggggaagtcggtccccctggtcccccccgccccgcccgggggggt gaacctggaaaacaaggtccttctggatcaagtggtgaacgtggcccccctggtcccatg ggcccccctggattggctggaccccctggcgagtctggacgtgagggatctcctggtgct gaaggctcccctggacgagatggttctcccggccccaagggtgaccgtggtgagactggc cctgctggcccccctggtgctcctggcgctcctggtgcccctggtcccgtcggccccgct ggcaagaatggcgaccgtggtgagactggtcccgctggtcccgccggtcccatcggcccc gtcggtgctcgtggtcccgctggaccccaaggcccccgtggtgacaagggtgagacaggc gaacagggtgacagaggcataaagggtcaccgtggcttctctggtctccagggtccccct ggccctcccggctctcctggtgaacaaggtccttccggagcttctggtcctgctggtccc cgaggtccccccggcgctgctggctctcctggcaaagacggactcaacggtctcccaggc cccattggcccccctggtcctcgtggtcgcactggtgatgctggccctgttggtcccccc ggccctcctggaccccccggtcctcccggtcctcccagcggtggtttcgacttcagcttc ctgccccagccacctcaagagaaggctcacgatggcggccgctactaccgggccgatgat gccaacgtggtccgtgaccgtgacctcgaggtggacaccaccctcaagagcctgagccag cagatcgagaacatccggagccccgaaggcagccgcaagaaccctgcccgcacctgccgt gacctcaaccgctgccatacctcccctgactccatcctgctcggttccactgcaggagaa tactggatcgatcccaaccaaggttgcaacctggatgccatcaaggtcttctgcaacatg gagacaggtgagacctgcgtgtaccccactcagccccacgtggcccagaagaactggtac atcagcaagaaccccaaggacaagaggcacgtctggtatggcgagagcatgaccgacgga ttccagttcgagtatggtggccagggctccgatcccgccgatgtggccatccagctgact ttcctgcgcctgatgtccaccgaggcgtcccagaacatcacctaccactgcaagaacagc gtggcctacatggaccagcagactggcaacctcaagaaggccctgctcctccagggctcc aacgagatcgagatccgggccgagggcaacagccgcttcacctacagcgtcacctacgac ggctgcacgagtcacaccggaaactggggcaagacagtgatcgaatacaaaaccaccaag acctcccgcttgcccatcatcgatgtggccccattggacgttggcgccccagaccaggaa ttcggcatcgacattggccctgcctgcttcctgtaa

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