Panthera tigris altaica (Amur tiger): 102967816
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Entry
102967816 CDS
T02988
Symbol
PABPC4L
Name
(RefSeq) poly(A) binding protein cytoplasmic 4 like
KO
K13126
polyadenylate-binding protein
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg03015
mRNA surveillance pathway
ptg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102967816 (PABPC4L)
09123 Folding, sorting and degradation
03018 RNA degradation
102967816 (PABPC4L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptg03019
]
102967816 (PABPC4L)
03041 Spliceosome [BR:
ptg03041
]
102967816 (PABPC4L)
Messenger RNA biogenesis [BR:
ptg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102967816 (PABPC4L)
mRNA cycle factors
Stress granule specific factors
102967816 (PABPC4L)
Spliceosome [BR:
ptg03041
]
Complex C
Other components
Complex C specific factors
102967816 (PABPC4L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
RRM_Nup35
RBD_DEAH11
RRM_10
RRM_occluded
RRM_MARF1
RBD_RDR6
Nup35_RRM_2
DUF4523
RRM_3
Motif
Other DBs
NCBI-GeneID:
102967816
NCBI-ProteinID:
XP_007091865
UniProt:
A0A8C9JKB8
LinkDB
All DBs
Position
Un
AA seq
370 aa
AA seq
DB search
MNVAAKYRQASLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLK
LADAQRALDTMNFDTIKGKPIRLMWSQRDAYLRKSGIGNVFIKNLDRSIDNKTLYEHFSA
FGKILSSKVMSDDQGSRGYAFVHFQNQIAADRAIEEMNGALLKDCRLFVGRFKNRKDREA
ELRNKANEFTNVYIKNFGDDMDDERLKEVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSH
EAAKKAVEEMNGKDINGQLLFVGRAQKKSERQAELKQVFEQLKQERFRRCQGMKLYIKNL
DDTIDDEKLWREFSSFGSISRVKIMREEGRSKGFGLICFSSPEEATKAMAEMNGRILGSK
PLYIALAQKP
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtggcagcgaagtaccgccaggcgtcgctgtacgtgggtgacctccacgcagat
gtcaccgaggacttgctgttcaaaaagttcagcaccgtggggcctgtgttgtccatccgc
atctgcagggacctggtcacccgccgctctctgggctatgcctacgtgaacttcctgaag
ctggccgatgcccagagggccctggacacgatgaactttgacacgataaagggcaaaccc
atccgcctcatgtggtctcagcgcgatgcctacttaaggaagtcgggcatcggaaacgtg
ttcatcaagaatctggacagatccattgataacaaaaccctctatgaacatttttcagcc
tttgggaagatcctttcctccaaggtgatgagtgatgaccaaggatctaggggctatgcc
tttgtgcactttcagaaccagatcgcagccgacagggccatcgaggagatgaatggggct
ctgcttaaggactgcaggctgtttgtcggcagattcaaaaaccgtaaagatcgggaagcc
gagctccgcaacaaggccaatgaattcaccaatgtttacatcaaaaactttggagatgac
atggatgatgagagactgaaggaagttttcagtaaatatggtaaaaccctgagtgtgaag
gtgatgacagattccagtgggaaatccaaaggctttggctttgtgagttttgatagccat
gaggctgccaaaaaggccgttgaagaaatgaatggaaaggatataaacggacagctgctt
tttgtaggccgggcgcaaaagaaatccgagcgacaggccgagttaaagcaagtgtttgag
cagctgaaacaggaaagatttcggaggtgccaaggcatgaagctctatattaagaatctc
gatgacaccattgatgatgagaaactgtggagggaattttcttcatttggatcaattagc
agagtcaagataatgcgggaagaagggcgaagcaaagggtttggcttgatctgcttctcc
tctcctgaggaggccactaaagcaatggctgagatgaatggccgtatcttgggctccaag
ccactctacattgccctggcccagaagccctag
DBGET
integrated database retrieval system
