Panthera tigris altaica (Amur tiger): 102970672
Help
Entry
102970672 CDS
T02988
Symbol
IFIH1
Name
(RefSeq) interferon induced with helicase C domain 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg04622
RIG-I-like receptor signaling pathway
ptg05161
Hepatitis B
ptg05162
Measles
ptg05164
Influenza A
ptg05168
Herpes simplex virus 1 infection
ptg05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
102970672 (IFIH1)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
102970672 (IFIH1)
05171 Coronavirus disease - COVID-19
102970672 (IFIH1)
05164 Influenza A
102970672 (IFIH1)
05162 Measles
102970672 (IFIH1)
05168 Herpes simplex virus 1 infection
102970672 (IFIH1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ptg04054
]
102970672 (IFIH1)
Enzymes [BR:
ptg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102970672 (IFIH1)
Pattern recognition receptors [BR:
ptg04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
102970672 (IFIH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARD_2
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
CARD
SWI2_SNF2
SNF2-rel_dom
Cas3-like_C_2
Sigma70_ner
DUF3638
Arg_decarbox_C
NrS1-pol-like_tail
Motif
Other DBs
NCBI-GeneID:
102970672
NCBI-ProteinID:
XP_007078509
UniProt:
A0A8C9KJS0
LinkDB
All DBs
Position
Un
AA seq
1031 aa
AA seq
DB search
MSNGYCADRSFCYLLSCFRTRVKTYIQVEPVLDYLTFLPADLKEQIQRMAVTAGNIHAAE
LLLSTLEKGVWPPGWARQFVVALQRAGSVLAARYLNPELTDLPSPSSENAHDECLQLLXX
XLNLLQPSLVDRILVKDVLDKCVEEKLLTNEDRNRISAAESNGNESGVRELLKRIVQKEN
WFSAFLTVLRQTENYALVEELTGTIFFGSNAGTESLSQEEDGPEVKEGVLAATGHLSPDK
EGRDMETHSLESSFADPCVTSESDTSLAEGSVSCLDESLGHNSNMGSDSGTMGSDSEEEN
VAERASPEPELHLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASE
PGKVIVLVNKVPLVEQLFRKEFEPFLKKWYHTIGLSGDTQLKISFPEVVKTYDVIISTAQ
ILENSLLNSEIGEDDGVQLSDFSLIVIDECHHTNKEAVYNNIMRRYLKQKLKNNKLKKEC
KPVIPLPQILGLTASPGVGGAKRQAEAKEHILKICANLDACTIKTVKENINQLKGQIKEP
CKKFAIADDTREDPFKDKLVEIMTRIQSFCEMSPMSDFGTQPYEQWTIQMEKKAAREGNR
KDRVCAEHLRKYNEALQINDTIRTIDAYNHLEAFYNDEKEKKFAVQEDDSDESGEEGNDD
GNEDEDDDKKPLRVDKTDRFLMDLFIENNRMLKKLAENPKHENEKLTKLRNTIMEQYTRT
EESARGIIFTKTRQSAYALSQWITENKKFAEVGVKAHHLIGAGHSSEFKPMTQNEQKEVI
SKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVAH
SGSGVIEREIVNDFREKMMYKAIDHVQNMNPEEYAHKILELQMQSIMEKKMKIKRSIAKY
YKENPSLINFLCKNCGVVACSGEDIHVIEKMHHVNMTPVFKELYIVRENKALRKKFVDYQ
TNGEIICKICGQAWGTMMVHKGLDFPCLKIKNFVVVFKNNSPKKQYKKWVELPITFPDLD
YSEYCLLSDED
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatggatattgcgcagacaggagtttctgctacctcctctcgtgtttcaggacc
agagtgaaaacgtacatccaggtggagcccgtgctggactacctgacctttctccctgca
gacttgaaggagcagattcagaggatggccgtcaccgctgggaacatacacgcagcggaa
ctgcttctgagcaccttggagaagggagtctggcccccgggctgggctagacaatttgtg
gtggcccttcagagagcaggcagcgttttagccgcccgctacctgaacccagagctcacc
gacttgccctctccatcctctgagaacgctcatgatgagtgtctccagctgctgannnnn
nnnctgaacctccttcagccctccctggtggacagaattctggttaaagatgtcttggat
aagtgtgtggaggagaaactgttgacaaacgaagacagaaatcggatttctgctgcagaa
agcaatggaaatgaatcaggtgtaagagagctactgaaaaggatcgtgcagaaagaaaac
tggttttctgcatttctgactgttttgcgtcaaacagaaaactatgcccttgtcgaggag
ctaacaggcaccattttctttggaagcaatgcagggactgagagtttatcacaagaagaa
gatggccctgaagttaaagagggggttcttgcagccacgggtcacctaagtccagacaaa
gaaggtcgggacatggagactcactcactggaatcgtcttttgcggatccttgtgtaact
tcagaatcagacacaagtttggcagaaggaagtgtcagctgcttagatgaaagtcttgga
cataacagcaacatgggcagtgattcaggcaccatgggaagtgattcagaggaagaaaat
gtggcagaaagagcatcccctgagccagaactgcatctcaggccctaccaaatggaagtt
gcccaaccagccttggaggggaaaaatatcattatatgcctccctacagggagtgggaaa
accagagtggctgtttacattgccaaggatcacttggacaagaagaaaaaagcatctgaa
cctggaaaagttatagtccttgtcaataaggtaccactagttgaacagctcttccgcaaa
gagtttgaaccatttttgaagaaatggtatcatactattggattaagtggtgatacccaa
ttgaaaatatcatttccagaagttgtcaaaacctatgatgttatcatcagtacagcccag
atccttgaaaactcccttttaaactcagaaataggagaagatgatggtgtccagttgtca
gacttttccctcatcgttattgatgaatgccatcacaccaacaaagaagcagtctataat
aacatcatgaggcgttacttgaaacagaagttgaaaaacaataaactcaagaaagaatgc
aaaccagtgattcccctacctcagatactaggactgacagcttcaccaggtgttggagga
gccaaaaggcaagctgaagccaaagaacatattttaaaaatatgtgccaatcttgatgca
tgtaccattaaaactgtgaaagaaaatataaatcaactcaaaggccaaataaaagagcca
tgcaaaaagtttgcaatcgcagatgacaccagagaagatccatttaaagataaacttgta
gaaataatgaccaggattcaaagtttttgtgaaatgagtccaatgtcagattttggaact
caaccctatgaacaatggaccattcaaatggaaaaaaaagctgcaagagaaggaaatcgc
aaagaccgagtttgcgcagagcatttgaggaagtacaatgaggccctacaaattaatgat
acaattagaacgattgatgcctataatcacctggaagctttctataatgatgaaaaagaa
aagaagtttgcagttcaagaagatgatagcgatgagagtggtgaggagggtaacgatgat
ggtaacgaagatgaggatgatgacaagaagcctttgagagtggataagacagataggttt
ctcatggatttatttatagaaaacaatagaatgttgaaaaagctggctgaaaacccaaaa
catgaaaatgagaagctgaccaaattaagaaacaccataatggaacaatacacaaggact
gaggaatcagcccgaggaataattttcacaaaaacacgacagagtgcatatgccctttcc
cagtggattactgaaaataaaaaatttgctgaagttggcgtcaaagcccatcatctgatt
ggagctggacacagcagtgagttcaagcccatgacacagaatgaacaaaaagaagtcatt
agtaaattccgcactggaaaaataaatctgcttatcgctaccacagtggcagaagaaggt
ctggatattaaagaatgtaatattgttatccgttatggtctcgtcactaatgaaatagcc
atggtccaggcccgaggtcgagccagagctgatgagagtacctacgtcctggttgcccac
agtggttcaggagttattgaacgtgagatagttaatgatttccgagagaaaatgatgtat
aaagctatagaccatgttcaaaatatgaacccagaggagtatgctcataagattttggaa
ttacagatgcaaagtataatggaaaagaaaatgaaaatcaagagaagtatcgccaagtat
tacaaggaaaacccatcgttaataaatttcctctgcaaaaactgcggtgtggtagcctgc
tctggggaagacatccatgtaattgagaagatgcaccatgtcaacatgacaccagtattc
aaggaactctacattgtgagagaaaacaaagccctacgaaagaagtttgtagactatcaa
acaaatggcgagattatctgcaaaatatgtggccaagcttggggaacgatgatggtgcac
aaaggcttagattttccttgtctcaaaataaagaattttgtagtggttttcaaaaataat
tcaccgaagaaacaatacaaaaagtgggtggaattaccgatcacatttcctgatcttgac
tattcagaatattgtttgttaagtgatgaggactaa
DBGET
integrated database retrieval system
