Panthera tigris altaica (Amur tiger): 102971987
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Entry
102971987 CDS
T02988
Symbol
COL23A1
Name
(RefSeq) collagen type XXIII alpha 1 chain
KO
K24355
collagen type XXIII alpha
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102971987 (COL23A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ptg00536
]
102971987 (COL23A1)
Glycosaminoglycan binding proteins [BR:
ptg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102971987 (COL23A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
102971987
NCBI-ProteinID:
XP_007083164
LinkDB
All DBs
Position
Un
AA seq
392 aa
AA seq
DB search
MVFPRLNPGFISRDHHVYSRRIFKGDQGQDGAAGPPGPPGPPGVRGPPGDTGKDGPRGAQ
GPEGPKGEAGRDGEMGLKGPPGPKGEPGSVGPPGENGVDGTPGPKGEPGQQGADGATGLR
GPPGLKGEQGDTVVIDYDGRILDALKGPPGPQGPPGPPGIPGAKGELGLPGAPGIDGEKG
PKGAKGDPGEVGPAGPKGEAGEMGLSGLPGADGPKGEKGESASDNLRESLAQIIVEPGPP
GPPGPPGPMGLQGIQGPKGLDGAKGEKGVSGERGPSGLPGPAGPPGLIGLPGTKGEKGRP
GEPGLDGFPGPRGEKGDRSERGEKGERGVPGRKGVKGQKGEPGPPGLDQPCPVENLKCGG
QRGAPGSRGLARGSGPCPVGPDGLPVPGCWHK
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggttttcccacgactcaatccgggctttataagtagagaccatcacgtgtacagtcgc
cgcatcttcaagggagaccaagggcaagacggagctgctgggcctccggggccccctgga
ccccctggggtccgaggccctcctggcgacactgggaaagatggccccaggggagcacaa
ggcccagagggtcccaaaggagaggctggacgagacggcgagatgggcctgaagggaccc
ccagggcccaagggcgagccagggagtgtggggcctccaggagaaaacggtgtggacggc
accccagggccaaagggagagcctggccagcaaggtgccgatggagccacagggctgcgg
ggtcccccgggcctcaagggtgagcaaggagacacagtggtgattgactacgatggcagg
atcttggatgccctgaagggtcctcccgggccacaggggcccccagggccaccagggatc
cccggagccaagggcgagctgggactgcctggtgccccgggaatcgatggagagaagggt
cccaaaggagctaaaggcgacccaggagaggtggggccggccggacccaaaggggaagca
ggcgagatgggcctgtcgggcctcccgggcgccgacggccccaagggggagaagggagag
tcggcatctgacaacctacgggagagcctggctcagatcatagtggagccagggccccca
ggccctcctggtcccccaggccccatgggccttcagggaatccagggtcccaagggcttg
gacggagcaaagggagagaagggcgtgtcaggggagagaggccccagcggcctgcctggg
ccagctggcccgccgggccttattggactgccaggaaccaaaggagagaagggacgaccc
ggggagccaggcctggatggtttccctggaccccgaggagagaaaggtgaccggagtgaa
cgtggagagaagggggagcgaggagtcccgggccggaaaggtgtgaagggccagaagggt
gagccgggaccaccaggcctggaccagccgtgtccggtggagaaccttaaatgtggaggc
cagcgaggggcaccgggctccaggggcctggcgaggggcagcgggccctgccctgtgggc
cctgatgggctgcctgtgcctggctgctggcataagtga
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