Panthera tigris altaica (Amur tiger): 102972062
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Entry
102972062 CDS
T02988
Symbol
ARID1B
Name
(RefSeq) AT-rich interaction domain 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg03082
ATP-dependent chromatin remodeling
ptg04714
Thermogenesis
ptg05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102972062 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
102972062 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
102972062 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptg03000
]
102972062 (ARID1B)
03021 Transcription machinery [BR:
ptg03021
]
102972062 (ARID1B)
03036 Chromosome and associated proteins [BR:
ptg03036
]
102972062 (ARID1B)
Transcription factors [BR:
ptg03000
]
Eukaryotic type
Helix-turn-helix
ARID
102972062 (ARID1B)
Transcription machinery [BR:
ptg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102972062 (ARID1B)
Chromosome and associated proteins [BR:
ptg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102972062 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
102972062
NCBI-ProteinID:
XP_015399777
LinkDB
All DBs
Position
Un
AA seq
1995 aa
AA seq
DB search
MHAAEEGTVGLSQDASLLVSALHEFRSPGQVPTTPGPHDVIWDGEFSGRWDSVVVVAVET
EGLGVFWPEEEYGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPISI
QGRTPGAMGGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYNQQQVSAAAGPRPRPGPPVQP
AIVLLPDVACQEHLMQLQCREMLEKKAVLLALVAPASRGPFTQWLLLDAPVRCQRQCSKN
PSATGHNIKRLKYRAWQSVGEDEDCGFDSDSMGQKLADSERYEKIRATPVFGRAALAEEL
YVNIMREGGAGLFLSFLSTCGLYSMVMVERDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQ
ERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIP
GGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGF
MAGTQRNPQMSQYGPQQTGPSMSPHPSPGGQMHPGISSFQQSNSSGTYGPQMSQYGPQGN
YSRPPTYSGVPSASYSGPGPGMGINANNQMHGQGPSQPCGAMPLGRMPSAGMQNRPFPGN
MSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGL
MASSSPYSQPVNNSSGLMNTQAPPYSMAPNMVNSSTASMGLADMMSPGESKLPLPLKADG
KEEGTPQPESKSKDSYSSQGISQPPTPGNLPVPSPMSPSSASISSFHGDESDSISSPGWP
KTPSSPKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLPAVGKKPLD
LFRLYICVKEIGGLAQFNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFAFECKIERG
EEPPPEVFSTADTKKQPKLQPPSPANSGSLQGPQTPQSTSSNSMADVQGDLKPPTPASTP
HGQMTPMQGGRSGTVSVHDPFSDASDSSFPKRNSMTPSAPYQQSMSMPDVMGRMPYEPNK
DPFGGMRKVPGSSEPFMTQGQMPTSSVQDVYNQSPSGALSGLGMGRQQFPYGAGYDRRHE
PYGQQYPGQGPPSGQPPYGGDGGGLRWPTRPWNYKRHMDGMYGPPAKRHEGDMYNMQFGS
QQQEMYNQYGSSYSGPDRRPIQGQYPYPYNRERVQGPGQMQPHGIPPPMMGGPMQSSSSE
GPQQSMWATRNDMPYPYQNRQGPGGPAQAPPYPGMNRTDDMLVPEQRINHESQWPSHVSQ
RQPYMSSPASMQPITRPPQSSYQTPPSLPNHISRAPSPASFQRSLESRMSPSKSPFLPSL
KMQKVLPTVPTAQVTGPPPQPPPIRREITFPPGSVEASQPVLKQRRKITSKDIVTPEAWR
VMMSLKSGLLAESTWALDTINILLYDDSTVATFSLSQLSGFLELLVEYFRKCLIDIFGIL
TEYEVGDPSQKALDHNAGKRADGQSLADESGKEEEGTECVDEEDDEEDDEEDDEEEDDRK
TETEERSSATLASPNATADPKEKPRQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQEFNS
GLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSTGRKKEQEGKGDSDEQQEKSII
ATIDDVLCARPGALPEDANPGTQTESGKFPFGIHQAKSHRNIKLLEDEPRSRDETPLCTI
AHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEHPERKRAPQT
YEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDGLLH
WMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKFYAT
LVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGNLISFLEDGVTMAQYQQ
SQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVLNSL
VASVICDVLFQIGQL
NT seq
5988 nt
NT seq
+upstream
nt +downstream
nt
atgcatgctgcagaggaggggactgtgggcctgagtcaggacgcttctctcctggtctcc
gctctgcacgagttccgcagccccgggcaggtccccacaactcccggcccccatgatgtc
atctgggatggagagttttctgggcggtgggattctgtggtggtggtggcagtggaaact
gagggtcttggggttttctggcctgaggaggaatatggcagcccaatggatcctatggtg
atgaagaggccgcagttatatgggatgggcagtaaccctcattctcagcctcagcagagc
agcccttaccccggaggctcctacggtcccccagggccacagcgctatccaatcagcatc
cagggtcggaccccaggggccatgggaggaatgcagtacccacagcagcagatgccgcct
cagtatggacagcaaggcgtgagtggttactgccagcagggccagcagccttactacaac
cagcagcaggtgagcgcagccgctgggccccgcccccggcccggccctccagtccagccg
gcaattgtcttgcttcccgatgtcgcctgtcaggagcatttgatgcagctccagtgtcga
gagatgctagagaagaaagcggtcctgcttgctcttgtggcaccggcttctcgggggcct
ttcacccagtggctcctactggatgcacctgttaggtgtcagaggcagtgttccaagaat
ccgtcggccacaggccataatataaagcggctcaagtacagggcctggcagtcggtgggg
gaagacgaagactgtggctttgacagtgactcgatgggtcagaagcttgcggatagtgaa
agatatgaaaagatccgagcgacgccagttttcggaagagccgcactggccgaggagctt
tacgtgaacataatgcgagaaggcggcgcgggtctctttctgtctttcctgtcgacctgt
ggactttattccatggtcatggtagagagagacatgtctcaggaaggctatggaactagg
tctcaacctcctttggctcctggaaaacctaaccacgaagacttgaacttaatacaacaa
gaaagaccatcaagtttaccagacctgtctggctccattgatgacctccccacgggaacg
gaagccactctgagctcagcagtcagtgcgtctggatccacgagcagccaaggggatcag
agcaaccctgctcagtcgcctttctctccacacgcatccccccatctctccagcatcccc
gggggcccgtcgccttctcctgtcggctctcccgtgggaagcaaccagtcacgatctggc
ccaatttctcccgcaagtattccaggcagtcagatgcctcctcagccacctgggagccag
tcagaatccagttcccatcctgccttgagccagtcaccaatgccacaggaaagaggtttt
atggcaggcacacaaagaaaccctcagatgtctcaatatggacctcaacagacaggacca
tccatgtcgcctcatccttctcctggaggccagatgcatcctggaatcagtagctttcag
cagagtaactcaagtgggacttatggtccgcagatgagccagtatggaccacaaggtaac
tactccagacccccaacgtatagtggggtgcccagtgcgagctacagcggcccagggccc
ggcatgggcatcaatgccaacaaccagatgcacggacaagggccaagccagccgtgtggt
gctatgcccctgggacgaatgccatcagctgggatgcagaacaggccgtttcctggaaat
atgagcagcatgacccccagctctcccggcatgtcccagcagggagggccaggaatgggg
ccaccgatgccaaccgtgaaccgtaaggcacaggaggcagctgccgcagtgatgcaggcc
gctgcaaactcggcacaaagcaggcaaggcagtttcccgggcatgaaccagagtggactt
atggcttccagctctccctacagccagcccgtcaacaacagctctgggctcatgaacacc
caggcacccccctacagcatggcgcccaatatggtgaacagctcaacagcatctatgggt
cttgcagatatgatgtctcctggcgaatccaaattgcccctgcctctcaaagcagacggt
aaagaagaaggcactccacagcccgagagcaagtcgaaggatagctacagctctcagggt
atatctcagcccccaacccccggcaacctgccagtcccttccccaatgtcccccagctct
gctagcatctcctcatttcatggagatgaaagtgatagcattagcagcccaggctggcca
aagactccatcaagccctaagtccagctcatccaccaccactggggaaaagatcacaaag
gtgtatgagttggggaacgagccggagagaaagctgtgggtcgaccgataccttaccttc
atggaagagagaggctcccccgtctccagtctgcccgcggtgggcaagaagcccttggac
ctgttccggctctatatctgcgtcaaagagatcggaggtttggcacagtttaataaaaac
aagaagtggcgtgagctggcaaccaacctaaatgttggcacttcaagcagtgcagcgagc
tccctgaaaaagcagtatatccagtacctgtttgcctttgagtgcaagattgagcgcggg
gaggagcccccgccggaagtcttcagcaccgcggacaccaagaagcagccgaagctccag
ccgccctctcctgcgaactcagggtccttgcaaggtcctcagaccccccagtcaaccagc
agcaattcgatggcagacgtacaaggcgacctgaagccacctaccccggcgtctaccccg
catggacagatgaccccaatgcaaggtggaagaagcggtacagtcagcgtgcacgacccg
ttctcagacgccagtgactcatcgttcccaaaacggaactccatgaccccgagcgccccg
taccagcagagcatgagcatgcctgacgtgatgggcaggatgccctatgaacccaacaag
gaccccttcggtggaatgagaaaagtgcctgggagcagtgagccctttatgactcaagga
cagatgcccactagcagtgtgcaggacgtgtataaccagagtccctccggagcgctatcc
ggtctgggcatggggcggcagcagtttccctacggagccggctacgaccgaaggcacgaa
ccttacgggcagcagtacccaggccaaggccctccctcaggacagcccccatatgggggg
gacgggggcgggttacgctggcctacgcggccgtggaattacaaacgccatatggacggc
atgtatgggcctccggccaaacgccacgagggagacatgtacaacatgcagttcggcagc
cagcagcaagagatgtataaccagtacggaagttcctactccggaccggacaggaggccc
atccaggggcagtacccgtacccctacaacagagagagggtgcagggccccgggcagatg
cagccgcacgggatcccgcctcccatgatgggcggccccatgcagtcgtcctccagcgaa
gggcctcagcagagcatgtgggcgacgcgcaatgatatgccttacccctaccagaaccgg
cagggccccgggggcccggcccaggcccccccgtatccaggcatgaaccgcacggatgat
atgctggtacccgagcaaaggatcaatcacgagagccagtggccttcccacgtcagccaa
cgtcagccttatatgtcctctcccgcctccatgcagcccatcacgcgcccgcctcagtca
tcctaccagacgcctccatcactgccaaaccacatctccagagcccccagccccgcgtcc
ttccagcgctccctggagagccgcatgtctcccagcaagtctccctttctgccctctctg
aagatgcagaaggtcctgcccaccgtccccacggcccaggtcacgggcccgcccccccag
ccacccccgatccgaagggagatcaccttccctcctggctcagtcgaggcatcgcagcca
gtcttgaaacaaaggcgaaagattacctcaaaagatatcgttactcctgaggcctggcgt
gtgatgatgtccctcaagtccggtcttttggctgaaagtacatgggctctggacaccatt
aacattctcctgtacgatgacagcactgtcgccaccttcagtctctcccagctgtccgga
tttctggaacttttagtagagtactttagaaaatgcctaattgacatttttggaattctt
acggaatatgaggtgggagaccccagccaaaaagcacttgatcacaatgcggggaagaga
gctgacggccagtccttggccgacgagtctgggaaagaggaggagggcaccgagtgtgtg
gacgaggaggatgacgaggaggacgacgaggaggacgacgaggaggaggacgacaggaag
acggagaccgaggagaggagcagcgcgactctggcctctcccaacgccactgcggatccg
aaggagaagcccaggcaagctagcaagttcgacaagctcccgataaagatagtcaaaaag
aacaacctgtttgtggtcgaccgatctgacaagctgggtcgtgttcaggagttcaacagc
ggacttctgcactggcagcttggtgggggggacaccaccgagcacatccagactcacttt
gagagcaagatggaaattcctcctcgcaggcgtccacctccccctctgagctccaccggg
aggaagaaagagcaggaaggaaaaggcgattctgacgagcagcaagagaagagcatcatc
gcaaccatcgatgacgtcctctgtgctcggccgggggcgctgcccgaagatgcaaaccct
ggtacccagaccgagagcgggaagtttccctttgggatacatcaagccaaaagtcaccgg
aacatcaagctgctggaggacgagcccaggagccgagacgagactcctctctgcaccatc
gcgcactggcaggattccctggccaagcgctgcatctgtgtgtcgaatattgtccgtagc
ttgtcttttgtgcctggcaatgacgccgaaatgtccaaacatccaggcttggtgctgatc
ctggggaagctgattctccttcaccacgagcatccagagaggaagcgagcgccgcagacc
tacgagaaagaggaagacgaggacaaaggggtggcctgcagcaaagacgagtggtggtgg
gactgcctggaggtcctaagggacaacacgctggtcacgttggccaacatttccgggcaa
ctagacttgtctgcgtacacagaaagcatctgcctgccaattctggacggcttgctgcac
tggatggtgtgcccgtcggcagaggcacaagacccctttccaaccgtgggacccaactct
gtcctgtcgcctcagagacttgtgctggagaccctctgcaaactcagtatccaggacaac
aacgtggacctgatcttggccacgcctccatttagtcgccaggagaaattctacgctacg
ttagttaggtacgttggggatcgcaaaaacccagtctgtcgagaaatgtccatggcgctc
ttatcgaaccttgcccaaggggacgcgctggcagcaagggcaatagctgtgcagaaggga
agcatcggaaacttgataagcttcctagaggacggggtcaccatggcccagtatcagcag
agccagcataacctcatgcacatgcagccgccgcctctagaaccaccgagcgtggacatg
atgtgcagggcggccaaggctctgctggccatggccagggtggacgagaaccgctcggaa
ttccttctgcacgagggtcgattgctggatatctcgatatcagccgtcctgaactctctg
gttgcgtctgtcatctgtgatgtactgtttcagattgggcagttatga
DBGET
integrated database retrieval system